##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545172_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2339250 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.978298599978626 31.0 31.0 33.0 28.0 34.0 2 31.25281393609063 31.0 31.0 34.0 28.0 34.0 3 31.366069039221973 31.0 31.0 34.0 28.0 34.0 4 35.15718670514054 35.0 35.0 37.0 32.0 37.0 5 35.002472159880305 35.0 35.0 37.0 32.0 37.0 6 35.057248690819705 37.0 35.0 37.0 32.0 37.0 7 35.68774051512237 37.0 35.0 37.0 35.0 37.0 8 35.68958640589933 37.0 35.0 37.0 35.0 37.0 9 37.366052367211715 39.0 37.0 39.0 35.0 39.0 10 36.52431548573261 39.0 35.0 39.0 32.0 39.0 11 36.20926536282997 38.0 35.0 39.0 31.0 39.0 12 35.650234476862245 37.0 35.0 39.0 30.0 39.0 13 35.38957742866303 37.0 35.0 39.0 30.0 39.0 14 36.273697125146946 38.0 35.0 40.0 30.0 41.0 15 36.5314344341135 38.0 35.0 40.0 30.0 41.0 16 36.635050977877526 38.0 35.0 40.0 31.0 41.0 17 36.57645783905098 38.0 35.0 40.0 31.0 41.0 18 36.49274468312493 38.0 35.0 40.0 30.0 41.0 19 36.42836977663781 38.0 35.0 40.0 30.0 41.0 20 36.28307534466175 38.0 34.0 40.0 30.0 41.0 21 36.1779668697232 38.0 34.0 40.0 30.0 41.0 22 36.1153220049161 38.0 34.0 40.0 30.0 41.0 23 36.036683124933205 38.0 34.0 40.0 30.0 41.0 24 35.9534072886609 38.0 34.0 40.0 30.0 41.0 25 35.85036742545688 38.0 34.0 40.0 30.0 41.0 26 35.690299882440954 37.0 34.0 40.0 29.0 41.0 27 35.59008357379502 37.0 34.0 40.0 29.0 41.0 28 35.563188201346584 37.0 34.0 40.0 29.0 41.0 29 35.50865020840013 37.0 34.0 40.0 29.0 41.0 30 35.421353852730576 37.0 34.0 40.0 28.0 41.0 31 35.27686651704606 37.0 34.0 40.0 27.0 41.0 32 35.12438217377365 37.0 34.0 40.0 27.0 41.0 33 34.91521940792989 37.0 33.0 40.0 25.0 41.0 34 34.70856342844929 37.0 33.0 40.0 25.0 41.0 35 34.561329913433795 37.0 33.0 40.0 24.0 41.0 36 34.39173111039863 37.0 33.0 40.0 23.0 41.0 37 34.33020498022871 37.0 33.0 40.0 23.0 41.0 38 34.2643676392006 37.0 33.0 40.0 23.0 41.0 39 34.18269958319974 36.0 33.0 40.0 23.0 41.0 40 34.05265576573688 36.0 33.0 40.0 23.0 41.0 41 33.963398952655766 36.0 33.0 40.0 23.0 41.0 42 33.895404082505074 36.0 33.0 40.0 23.0 41.0 43 33.83698706850486 36.0 33.0 40.0 23.0 41.0 44 33.73887613551352 36.0 32.0 40.0 23.0 41.0 45 33.67297980121834 35.0 32.0 40.0 23.0 41.0 46 33.62449503045848 35.0 32.0 40.0 23.0 41.0 47 33.5128528374479 35.0 32.0 39.0 23.0 41.0 48 33.43879619536176 35.0 32.0 39.0 23.0 41.0 49 33.38171080474511 35.0 32.0 39.0 22.0 41.0 50 33.33829304264187 35.0 32.0 39.0 22.0 41.0 51 33.183840119696484 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 5.0 12 6.0 13 8.0 14 39.0 15 82.0 16 309.0 17 835.0 18 1869.0 19 3487.0 20 5893.0 21 9165.0 22 13793.0 23 19451.0 24 26607.0 25 35392.0 26 44871.0 27 51894.0 28 57501.0 29 65079.0 30 77305.0 31 91640.0 32 111170.0 33 138446.0 34 201371.0 35 252413.0 36 192471.0 37 234635.0 38 300444.0 39 402874.0 40 193.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.78326386662391 23.06418723949984 26.993096077802715 14.159452816073529 2 31.87273698835097 25.404039756332157 28.968216308645932 13.755006946670942 3 29.570588863952125 25.92758362723095 31.427936304371055 13.07389120444587 4 26.722325531687506 27.04153040504435 31.379972213316233 14.856171849951908 5 22.825392754087847 32.26204980228706 30.630501229026397 14.282056214598695 6 20.778155391685367 41.78356310783371 27.42323394250294 10.015047557977983 7 86.65456877204232 4.076007267286523 7.496291546435824 1.773132414235332 8 87.78873570588864 3.516896441167041 6.759944426632468 1.9344234263118523 9 83.27925617184995 5.094752591642621 8.509223041573154 3.116768194934274 10 43.087528053863416 29.364497167895692 14.783669979694347 12.764304798546542 11 36.49691140322753 23.651383990595278 24.11473762958213 15.736966976595063 12 34.44916105589398 21.526643154857325 27.323415624666026 16.700780164582664 13 24.993181575291228 29.458971892700653 27.973239286095968 17.57460724591215 14 19.595725125574436 31.69614192583093 30.234348616009406 18.47378433258523 15 17.83516084215026 22.968301806134445 39.44789996793844 19.748637383776853 16 21.196537351715293 20.802180185957038 36.835695201453454 21.16558726087421 17 21.280025649246554 20.997627444693812 29.93865555199316 27.783691354066477 18 23.16199636635674 23.466495671689643 31.84935342524313 21.522154536710485 19 27.809169605642836 25.178711125360692 25.95314737629582 21.05897189270065 20 28.3351501549642 24.6328096612162 26.267820882761566 20.76421930105803 21 24.43176231698194 26.32095757187133 29.067735385273057 20.179544725873676 22 23.756032916533076 23.595425884364644 27.80019236934915 24.848348829753125 23 21.779501977129424 27.24488618146842 27.24125253820669 23.73435930319547 24 21.394977022549963 25.166313989526557 33.51292080795127 19.925788179972212 25 21.838837234156248 25.54720530084429 30.569028534786792 22.044928930212677 26 20.239435716575827 28.285946350325958 27.71302767981191 23.76159025328631 27 20.461216201774075 27.96601474831677 29.07047130490542 22.50229774500374 28 19.94502511488725 26.372298813722345 32.35891845677033 21.32375761462007 29 20.336432617291866 24.844544191514377 32.38820134658545 22.430821844608314 30 22.357251255744362 27.081885219621675 30.14222507213851 20.418638452495458 31 27.05008015389548 25.362402479427164 26.91281393609063 20.674703430586728 32 27.84546328951587 24.9342310569627 26.171507961953616 21.04879769156781 33 27.211285668483487 25.541605215346795 25.82665384204339 21.420455274126322 34 21.527669124719463 26.41457732179117 28.00820775889708 24.049545794592284 35 22.672779737095222 25.965886502084 28.87459655872609 22.48673720209469 36 27.327348509137543 26.51349791599872 25.310676498877843 20.848477075985894 37 22.716084215026182 30.497894624345413 25.922453777920275 20.863567382708133 38 22.679106551245056 29.826696590787645 25.22000641231164 22.27419044565566 39 21.45888639521214 29.370481992091484 25.661087955541305 23.50954365715507 40 24.48831890563215 25.874788928075237 26.507042855616113 23.129849310676498 41 21.303537458587154 24.96402693170888 27.38334936411243 26.349086245591536 42 22.311082611948272 26.416501015282677 25.70016030779096 25.572256064978095 43 22.02205835203591 26.631527198888534 26.881094367852942 24.465320081222615 44 22.643838837234156 26.86348188521962 27.569178155391683 22.923501122154537 45 20.7021908731431 29.91227957678743 25.567639200598478 23.817890349470986 46 22.245206797050336 29.263439136475366 27.007929892059423 21.48342417441488 47 22.146670941541093 27.165672758362724 27.702938976167573 22.98471732392861 48 22.6972747675537 26.526792775462223 28.318948380891314 22.456984076092766 49 22.42449503045848 25.56943464785722 29.132542481564606 22.8735278401197 50 21.381724911830716 29.128139360906275 27.65544512129956 21.83469060596345 51 21.166057497061026 29.725852303088594 26.407481030244735 22.70060916960564 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1003.0 1 1913.0 2 2823.0 3 12228.0 4 21633.0 5 15765.5 6 9898.0 7 10133.0 8 10368.0 9 10824.5 10 11281.0 11 11468.0 12 11655.0 13 11159.0 14 10663.0 15 10260.0 16 9857.0 17 9452.5 18 9048.0 19 8807.0 20 8566.0 21 9159.5 22 9753.0 23 9974.0 24 10195.0 25 12620.5 26 18111.0 27 21176.0 28 22649.5 29 24123.0 30 28983.5 31 33844.0 32 41314.0 33 48784.0 34 56108.5 35 63433.0 36 70202.0 37 76971.0 38 82772.0 39 88573.0 40 109796.0 41 131019.0 42 145355.5 43 159692.0 44 165252.0 45 170812.0 46 170830.5 47 170849.0 48 170051.5 49 169254.0 50 170076.0 51 170898.0 52 159459.0 53 148020.0 54 137308.5 55 126597.0 56 123086.5 57 119576.0 58 118517.0 59 117458.0 60 104893.5 61 92329.0 62 83356.5 63 74384.0 64 68759.0 65 63134.0 66 53071.0 67 43008.0 68 35730.5 69 28453.0 70 24806.5 71 21160.0 72 17668.0 73 14176.0 74 12260.5 75 7593.0 76 4841.0 77 3655.0 78 2469.0 79 1794.0 80 1119.0 81 850.0 82 581.0 83 431.5 84 282.0 85 167.0 86 52.0 87 39.5 88 27.0 89 17.5 90 8.0 91 7.5 92 7.0 93 6.0 94 5.0 95 2.5 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2339250.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.51224089665015 #Duplication Level Percentage of deduplicated Percentage of total 1 77.69524166230018 15.160082718382503 2 7.076989812637702 2.761758600946517 3 2.875352036021797 1.6831368476859239 4 1.653759647144983 1.2907422648100824 5 1.1197425216762833 1.0924342912585072 6 0.8137829285609898 0.9527237123798084 7 0.6704896918931185 0.9157929470857485 8 0.5183792304650824 0.8091792336523853 9 0.40810354387035674 0.7166713192897531 >10 4.813742749864271 21.606494423453267 >50 1.3076472405902964 18.194626289979265 >100 1.0399517430862557 33.06505901918249 >500 0.004618097731113318 0.6207681914908647 >1k 0.0019791847419057076 0.5811200399088119 >5k 0.0 0.0 >10k+ 2.1990941576730083E-4 0.5494101004941614 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12804 0.5473549214491824 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2367 0.10118627765309395 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01957892486908197 0.0 2 0.0 0.0 0.0 0.07566527733247835 0.0 3 0.0 0.0 0.0 0.1093512878059207 0.0 4 0.0 0.0 0.0 0.16616436892166292 0.0 5 4.274874425563749E-5 0.0 0.0 0.29966869723201883 0.0 6 4.274874425563749E-5 0.0 0.0 0.4689964732285989 0.0 7 4.274874425563749E-5 0.0 0.0 0.5995938869295715 0.0 8 4.274874425563749E-5 0.0 0.0 0.9617612482633323 0.0 9 4.274874425563749E-5 0.0 0.0 1.1415624666025435 0.0 10 4.274874425563749E-5 0.0 0.0 1.4457197819814043 0.0 11 4.274874425563749E-5 0.0 0.0 1.6299241209789463 0.0 12 4.274874425563749E-5 0.0 0.0 1.8153681735599017 0.0 13 4.274874425563749E-5 0.0 0.0 1.8882547825157636 0.0 14 4.274874425563749E-5 0.0 0.0 1.92288126536283 0.0 15 4.274874425563749E-5 0.0 0.0 1.9631933311958962 0.0 16 4.274874425563749E-5 0.0 0.0 2.039841829646254 0.0 17 4.274874425563749E-5 0.0 0.0 2.1268782729507323 0.0 18 4.274874425563749E-5 0.0 0.0 2.2701293149513733 0.0 19 4.274874425563749E-5 0.0 0.0 2.330490541840333 0.0 20 4.274874425563749E-5 0.0 0.0 2.3990595276263758 0.0 21 8.549748851127498E-5 0.0 0.0 2.479127925617185 0.0 22 8.549748851127498E-5 0.0 0.0 2.566378112642941 0.0 23 8.549748851127498E-5 0.0 0.0 2.668718606390937 0.0 24 1.2824623276691248E-4 0.0 0.0 2.7431869188842577 0.0 25 1.2824623276691248E-4 0.0 0.0 2.8135086031847814 0.0 26 1.2824623276691248E-4 0.0 0.0 2.8808378753874107 0.0 27 1.7099497702254996E-4 0.0 0.0 2.95492144918243 0.0 28 1.7099497702254996E-4 0.0 0.0 3.031014213957465 0.0 29 1.7099497702254996E-4 0.0 0.0 3.118734637170033 0.0 30 2.1374372127818745E-4 0.0 0.0 3.255188628834028 0.0 31 2.1374372127818745E-4 0.0 0.0 3.351629795874746 0.0 32 2.1374372127818745E-4 0.0 0.0 3.438922731644758 0.0 33 2.5649246553382496E-4 0.0 0.0 3.5286950945815967 0.0 34 2.9924120978946244E-4 0.0 0.0 3.629368387303623 0.0 35 2.9924120978946244E-4 0.0 0.0 3.7633857005450464 0.0 36 3.4198995404509993E-4 0.0 0.0 3.8651704606177195 0.0 37 3.4198995404509993E-4 0.0 0.0 3.967938441808272 0.0 38 3.4198995404509993E-4 0.0 0.0 4.109821523992733 0.0 39 3.4198995404509993E-4 0.0 0.0 4.366955220690392 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGATC 20 7.0347864E-4 45.0 16 TGACGTA 25 3.8920494E-5 45.0 21 CGTTTTT 9605 0.0 43.125977 1 CGGTCTA 680 0.0 42.35294 31 ACGGTCT 700 0.0 41.142857 30 TACGGGA 910 0.0 41.043957 4 CGACGGT 725 0.0 40.03448 28 CACGACG 745 0.0 39.865772 26 GGCGATA 830 0.0 39.036144 8 ACGGGAT 885 0.0 38.898304 5 TTACGGG 625 0.0 38.88 3 ACGGGTA 255 0.0 38.82353 5 CGAACTA 35 6.2510626E-6 38.571426 36 ATATCGC 35 6.2510626E-6 38.571426 22 AGGGTAA 1165 0.0 38.433475 6 ACGACGG 780 0.0 38.076927 27 TCACGAC 775 0.0 38.032257 25 TAGGGTA 1625 0.0 37.93846 5 GGGCGAT 3615 0.0 37.904564 7 ACTAATC 2085 0.0 37.769783 10 >>END_MODULE