##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545170_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1778162 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.133216771025364 31.0 31.0 33.0 30.0 34.0 2 31.413780634160442 31.0 31.0 34.0 30.0 34.0 3 31.529218372679203 31.0 31.0 34.0 30.0 34.0 4 35.302372337278605 37.0 35.0 37.0 33.0 37.0 5 35.16419538827171 37.0 35.0 37.0 32.0 37.0 6 35.22683759972376 37.0 35.0 37.0 32.0 37.0 7 35.780356907863286 37.0 35.0 37.0 35.0 37.0 8 35.78115492289229 37.0 35.0 37.0 35.0 37.0 9 37.474399970306415 39.0 37.0 39.0 35.0 39.0 10 36.70986445554455 39.0 37.0 39.0 32.0 39.0 11 36.421586447129116 38.0 35.0 39.0 32.0 39.0 12 35.80041413549497 37.0 35.0 39.0 31.0 39.0 13 35.54170204964452 37.0 35.0 39.0 30.0 39.0 14 36.550977919897065 38.0 35.0 40.0 31.0 41.0 15 36.78441165653073 38.0 35.0 41.0 31.0 41.0 16 36.88739777365617 38.0 35.0 41.0 31.0 41.0 17 36.795128340387436 38.0 35.0 40.0 31.0 41.0 18 36.716057367101534 38.0 35.0 40.0 31.0 41.0 19 36.66017044566243 38.0 35.0 40.0 31.0 41.0 20 36.523281905698134 38.0 35.0 40.0 31.0 41.0 21 36.40413921791153 38.0 35.0 40.0 31.0 41.0 22 36.308151338292014 38.0 35.0 40.0 30.0 41.0 23 36.235859837292665 38.0 35.0 40.0 30.0 41.0 24 36.17283464611211 38.0 34.0 40.0 30.0 41.0 25 36.064747194012696 38.0 34.0 40.0 30.0 41.0 26 35.89180569599395 38.0 34.0 40.0 30.0 41.0 27 35.80480462410062 37.0 34.0 40.0 30.0 41.0 28 35.79411268489598 37.0 34.0 40.0 30.0 41.0 29 35.76960985556997 37.0 34.0 40.0 30.0 41.0 30 35.70498301054685 37.0 34.0 40.0 29.0 41.0 31 35.60233432049498 37.0 34.0 40.0 29.0 41.0 32 35.46047547973694 37.0 34.0 40.0 29.0 41.0 33 35.24806626167919 37.0 34.0 40.0 27.0 41.0 34 35.09211871584254 37.0 34.0 40.0 27.0 41.0 35 34.94371491461408 37.0 34.0 40.0 26.0 41.0 36 34.791610100766974 37.0 33.0 40.0 25.0 41.0 37 34.72884191654079 37.0 33.0 40.0 25.0 41.0 38 34.680950891988466 37.0 33.0 40.0 25.0 41.0 39 34.605304803499344 37.0 33.0 40.0 25.0 41.0 40 34.4600227650799 36.0 33.0 40.0 24.0 41.0 41 34.380415282747016 36.0 33.0 40.0 24.0 41.0 42 34.33479008099375 36.0 33.0 40.0 24.0 41.0 43 34.29008380563751 36.0 33.0 40.0 24.0 41.0 44 34.15680517298199 36.0 33.0 40.0 23.0 41.0 45 34.08423416989003 35.0 33.0 40.0 23.0 41.0 46 33.990854039170785 35.0 33.0 40.0 23.0 41.0 47 33.88353254652838 35.0 33.0 40.0 23.0 41.0 48 33.83283694061621 35.0 33.0 39.0 23.0 41.0 49 33.805066130082636 35.0 33.0 39.0 24.0 41.0 50 33.7334691664764 35.0 33.0 39.0 24.0 41.0 51 33.55669280976649 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 2.0 14 9.0 15 45.0 16 151.0 17 470.0 18 1041.0 19 1946.0 20 3464.0 21 5506.0 22 8380.0 23 11766.0 24 16455.0 25 22449.0 26 29037.0 27 34261.0 28 39212.0 29 45032.0 30 53812.0 31 65546.0 32 81556.0 33 103659.0 34 159140.0 35 213110.0 36 145034.0 37 177056.0 38 233456.0 39 326331.0 40 232.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.37181876566927 23.816333944826173 29.001913211507162 13.809934077997394 2 30.160469068622543 26.08091951127063 30.75597161563457 13.002639804472258 3 29.42425943193027 25.415625797874437 32.320283528722356 12.839831241472938 4 27.446543115869083 27.256234246373502 30.765925714305 14.53129692345242 5 23.305244404053173 32.275574441473836 30.279918252667642 14.139262901805347 6 20.393136283420745 42.44326444947086 26.633400106402007 10.530199160706392 7 87.23845183959617 4.498127842120122 6.578421988547725 1.6849983297359858 8 88.58039931119886 3.533480076618441 6.240826201437214 1.6452944107454774 9 83.89618043800283 5.88478440097134 7.447296703000064 2.771738458025759 10 43.59928960353444 30.83588559422595 13.428304057785512 12.136520744454105 11 38.20782358412788 22.734374033412028 23.14378554934815 15.914016833111944 12 35.69219227494458 21.34231864138363 26.598701355669508 16.366787728002286 13 23.328358158592973 33.04811372642087 25.716498271811005 17.907029843175142 14 18.083560440499795 35.7008529031663 28.169480621000787 18.046106035333114 15 16.746786850691894 24.233000142844126 40.10708810558318 18.9131249008808 16 19.141338078307825 20.492171129514634 38.82452779892946 21.541962993248085 17 19.468023723372784 21.353509972657157 28.61319722275023 30.56526908121982 18 22.57285894086141 23.955410136984145 31.95783061385858 21.51390030829587 19 28.087542079967964 24.841662345725528 24.850210498256065 22.22058507605044 20 29.78541887634535 23.51321195706578 25.557513882312183 21.143855284276686 21 24.08886254458255 27.41386892757803 27.101074030375184 21.396194497464236 22 23.965307997808974 24.295480389300863 25.24696849893317 26.492243113957 23 21.580373441789895 28.146648055688967 25.45898517682866 24.813993325692486 24 20.94685411115523 24.007317668468904 35.149497064946836 19.896331155429035 25 21.22691858222142 25.42468009101533 31.23292478413103 22.115476542632223 26 19.867931043403246 31.222633258387035 25.9682751065426 22.941160591667124 27 20.019042134518678 31.278589914754672 27.391261313648585 21.311106637078062 28 19.346325025503862 27.795948850554673 33.45988723187201 19.39783889206945 29 20.068700152179613 24.820404440090385 32.54979017659808 22.561105231131922 30 20.742710731643125 29.580488166994908 28.948543496036923 20.728257605325048 31 27.119351330193766 27.383950393721157 25.0475490984511 20.449149177633984 32 28.349947867517134 26.84395460031201 25.00233387059222 19.803763661578643 33 27.05670237020024 27.460546339422393 24.30228516861793 21.180466121759434 34 21.110731193220865 27.74218547016526 26.805375438233416 24.341707898380463 35 21.87832154775549 25.48755400239123 29.490901278961086 23.143223170892192 36 27.707599195123954 26.738733591202603 25.14034154368387 20.413325669989575 37 21.855995123054033 31.62411523809417 26.362052501403134 20.15783713744867 38 22.17328904790452 30.647263860098235 24.727049616401654 22.452397475595586 39 22.552275889373412 30.032415494201313 25.3492651400716 22.066043476353673 40 24.675029609225707 26.299234827872827 26.20632990694886 22.819405655952608 41 19.479946146639058 26.015796086070896 28.015613875451166 26.488643891838876 42 22.008343446772567 26.89164429337709 24.63425717116888 26.46575508868146 43 22.329911447888325 26.5821111912188 25.488959948531125 25.599017412361754 44 21.636836238767895 28.289098518582673 27.158774059956293 22.91529118269314 45 20.174764728972953 32.59669253982483 24.037123726634583 23.19141900456764 46 21.475152432680485 30.982722609076113 26.618722028701548 20.923402929541854 47 22.4201169522237 27.640957348093142 26.48347001004408 23.455455689639077 48 21.41925201415844 26.524579875174474 29.321512888027073 22.734655222640008 49 21.508838902192267 26.427232164448462 29.76196769473198 22.301961238627303 50 20.993868950073168 29.901831216728286 26.96689053078403 22.137409302414515 51 21.002248389066914 30.23155370545541 25.554195849422044 23.212002056055635 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1151.0 1 1826.0 2 2501.0 3 8235.5 4 13970.0 5 10557.5 6 7145.0 7 7407.5 8 7670.0 9 8102.5 10 8535.0 11 8740.5 12 8946.0 13 8734.5 14 8523.0 15 7973.0 16 7423.0 17 6984.0 18 6545.0 19 6967.5 20 7390.0 21 7867.5 22 8345.0 23 7514.5 24 6684.0 25 7810.5 26 11769.0 27 14601.0 28 20076.0 29 25551.0 30 29719.5 31 33888.0 32 36757.0 33 39626.0 34 45560.0 35 51494.0 36 54650.5 37 57807.0 38 63758.5 39 69710.0 40 86263.5 41 102817.0 42 119583.5 43 136350.0 44 137523.5 45 138697.0 46 135711.5 47 132726.0 48 129297.5 49 125869.0 50 121165.5 51 116462.0 52 107809.5 53 99157.0 54 94813.0 55 90469.0 56 88267.5 57 86066.0 58 83494.5 59 80923.0 60 76217.0 61 71511.0 62 65250.0 63 58989.0 64 51968.0 65 44947.0 66 37970.0 67 30993.0 68 26778.0 69 22563.0 70 20098.5 71 17634.0 72 14471.0 73 11308.0 74 9139.0 75 5041.0 76 3112.0 77 2506.0 78 1900.0 79 1562.0 80 1224.0 81 849.5 82 475.0 83 433.5 84 392.0 85 236.0 86 80.0 87 69.0 88 58.0 89 40.0 90 22.0 91 12.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1778162.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.88475210330865 #Duplication Level Percentage of deduplicated Percentage of total 1 78.9733024940783 14.124179378861971 2 7.0811570303875095 2.5328947618616366 3 2.5096831199045257 1.3465518137205206 4 1.4103790096881892 1.0089711583993286 5 0.896139358522423 0.8013615138595784 6 0.6243920202579916 0.670025789855895 7 0.5147401326740219 0.6444199769349359 8 0.4218246506414091 0.6035383446229103 9 0.3423087219608063 0.5509895971562483 >10 4.470617474165028 18.874236898377074 >50 1.4076447096253157 18.00157493635298 >100 1.3399385486663875 39.14560774197026 >500 0.005038546833993164 0.6204291140831577 >1k 0.002519273416996582 0.6561364541638333 >5k 3.1490917712457276E-4 0.4190825197796638 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7441 0.41846580907701325 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2535 0.14256293858489835 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02699416588589791 0.0 2 0.0 0.0 0.0 0.1081453770803785 0.0 3 0.0 0.0 0.0 0.1487491016004166 0.0 4 0.0 0.0 0.0 0.20695527179188397 0.0 5 0.0 0.0 0.0 0.3329280459260742 0.0 6 0.0 0.0 0.0 0.4592382471338382 0.0 7 0.0 0.0 0.0 0.5357217171438823 0.0 8 0.0 0.0 0.0 0.7191695694767968 0.0 9 0.0 0.0 0.0 0.8058883273852439 0.0 10 0.0 0.0 0.0 0.9641416248913204 0.0 11 0.0 0.0 0.0 1.1213264033310801 0.0 12 0.0 0.0 0.0 1.2603463576434544 0.0 13 0.0 0.0 0.0 1.3201834253571947 0.0 14 0.0 0.0 0.0 1.3470088777063056 0.0 15 0.0 0.0 0.0 1.3871626994615789 0.0 16 0.0 0.0 0.0 1.474162646598004 0.0 17 0.0 0.0 0.0 1.576740476964416 0.0 18 0.0 0.0 0.0 1.7287513736093787 0.0 19 0.0 0.0 0.0 1.7942122258826811 0.0 20 0.0 0.0 0.0 1.8642283436492288 0.0 21 0.0 0.0 0.0 1.9471791659027693 0.0 22 0.0 0.0 0.0 2.0297363232371404 0.0 23 0.0 0.0 0.0 2.1284337422574544 0.0 24 0.0 0.0 0.0 2.2046360230395208 0.0 25 0.0 0.0 0.0 2.2658790368931516 0.0 26 0.0 0.0 0.0 2.328359283349886 0.0 27 0.0 0.0 0.0 2.392751616556872 0.0 28 0.0 0.0 0.0 2.4560754306975405 0.0 29 0.0 0.0 0.0 2.527103829684809 0.0 30 0.0 0.0 0.0 2.6204586533735394 0.0 31 5.623784559562065E-5 0.0 0.0 2.6993603507441954 0.0 32 5.623784559562065E-5 0.0 0.0 2.779443042872359 0.0 33 5.623784559562065E-5 0.0 0.0 2.8555890858088295 0.0 34 5.623784559562065E-5 0.0 0.0 2.940170805584643 0.0 35 5.623784559562065E-5 0.0 0.0 3.03549395386922 0.0 36 5.623784559562065E-5 0.0 0.0 3.112877229408794 0.0 37 5.623784559562065E-5 0.0 0.0 3.1994272737804543 0.0 38 5.623784559562065E-5 0.0 0.0 3.286202269534497 0.0 39 5.623784559562065E-5 0.0 0.0 3.3786010498481014 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAACTCG 35 1.2124292E-7 45.0 21 ACGCATC 20 7.03433E-4 45.0 17 CGATTCG 25 3.8916696E-5 45.0 17 CGCTAAC 20 7.03433E-4 45.0 14 GTCGTAC 35 1.2124292E-7 45.0 40 TTACGTA 20 7.03433E-4 45.0 13 GATTCGT 20 7.03433E-4 45.0 9 TGTAACG 20 7.03433E-4 45.0 1 GCGTATT 20 7.03433E-4 45.0 9 ATCGAAT 25 3.8916696E-5 45.0 12 ACGAACT 55 1.8189894E-12 45.0 39 TTCGAAC 30 2.1661745E-6 44.999996 25 TCGAACT 30 2.1661745E-6 44.999996 26 CGGTCTA 415 0.0 43.91566 31 GTACGAG 175 0.0 42.42857 1 CGTTTTT 6245 0.0 42.369896 1 ACGTAGG 175 0.0 41.142857 2 TCGTAAG 215 0.0 40.813953 1 TGTTATC 680 0.0 40.69853 24 GTAGGGT 750 0.0 40.499996 4 >>END_MODULE