##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545168_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1009740 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.103856438291047 31.0 31.0 33.0 30.0 34.0 2 31.377366450769504 31.0 31.0 34.0 30.0 34.0 3 31.479822528571713 31.0 31.0 34.0 30.0 34.0 4 35.25987580961436 37.0 35.0 37.0 33.0 37.0 5 35.120642937785966 37.0 35.0 37.0 32.0 37.0 6 35.169966526036404 37.0 35.0 37.0 32.0 37.0 7 35.780140432190464 37.0 35.0 37.0 35.0 37.0 8 35.795031394220295 37.0 35.0 37.0 35.0 37.0 9 37.512102125299585 39.0 37.0 39.0 35.0 39.0 10 36.66063937251174 39.0 35.0 39.0 32.0 39.0 11 36.32127874502347 38.0 35.0 39.0 32.0 39.0 12 35.56238932794581 37.0 35.0 39.0 30.0 39.0 13 35.25491908808208 37.0 35.0 39.0 30.0 39.0 14 36.119607027551645 38.0 35.0 40.0 30.0 41.0 15 36.41084338542595 38.0 35.0 40.0 30.0 41.0 16 36.55398419395092 38.0 35.0 40.0 31.0 41.0 17 36.49919187117476 38.0 35.0 40.0 31.0 41.0 18 36.402443203200825 38.0 35.0 40.0 31.0 41.0 19 36.31441262107077 37.0 35.0 40.0 30.0 41.0 20 36.171110384851545 37.0 34.0 40.0 30.0 41.0 21 36.0352981955751 37.0 34.0 40.0 30.0 41.0 22 35.976208726999026 37.0 34.0 40.0 30.0 41.0 23 35.94690217283657 37.0 34.0 40.0 30.0 41.0 24 35.84967219284172 37.0 34.0 40.0 30.0 41.0 25 35.742258403153286 37.0 34.0 40.0 30.0 41.0 26 35.60099233466041 37.0 34.0 40.0 29.0 41.0 27 35.51874046784321 37.0 34.0 40.0 29.0 41.0 28 35.518534474221084 37.0 34.0 40.0 29.0 41.0 29 35.50946481272407 37.0 34.0 40.0 29.0 41.0 30 35.40760690870917 36.0 34.0 40.0 29.0 41.0 31 35.22734664369045 36.0 34.0 40.0 28.0 41.0 32 35.06928021074732 36.0 34.0 40.0 27.0 41.0 33 34.84817576801949 36.0 33.0 40.0 26.0 41.0 34 34.64484025590746 36.0 33.0 40.0 25.0 41.0 35 34.500258482381604 36.0 33.0 40.0 24.0 41.0 36 34.32721987838453 36.0 33.0 40.0 24.0 41.0 37 34.25136371739259 36.0 33.0 40.0 23.0 41.0 38 34.20939350723949 36.0 33.0 40.0 23.0 41.0 39 34.150264424505316 36.0 33.0 40.0 23.0 41.0 40 33.99523936855032 36.0 33.0 40.0 23.0 41.0 41 33.96432844098481 35.0 33.0 40.0 23.0 41.0 42 33.895807831719054 35.0 33.0 40.0 23.0 41.0 43 33.83917840236101 35.0 33.0 40.0 23.0 41.0 44 33.71613979836393 35.0 33.0 40.0 23.0 41.0 45 33.64676154257532 35.0 33.0 39.0 23.0 41.0 46 33.597433002555114 35.0 32.0 39.0 23.0 41.0 47 33.47858359577713 35.0 32.0 39.0 23.0 41.0 48 33.42812407154317 35.0 32.0 39.0 23.0 41.0 49 33.392652564026385 35.0 32.0 39.0 23.0 41.0 50 33.32554023808109 35.0 32.0 39.0 23.0 41.0 51 33.17477964624557 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 3.0 14 11.0 15 32.0 16 116.0 17 306.0 18 720.0 19 1375.0 20 2279.0 21 3733.0 22 5415.0 23 7746.0 24 10758.0 25 14810.0 26 19062.0 27 21957.0 28 24629.0 29 27929.0 30 32547.0 31 39157.0 32 48588.0 33 61617.0 34 95881.0 35 128012.0 36 77748.0 37 93206.0 38 122571.0 39 169438.0 40 91.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.12030819815001 23.85297205221146 28.850793273515958 14.175926476122566 2 31.80818824647929 25.620654822033394 30.21896725889833 12.352189672588983 3 28.54318933586864 24.859666844930377 33.08267474795492 13.514469071246063 4 25.42674351813338 27.360211539604258 32.72733574979698 14.485709192465388 5 23.010180838631726 31.61912967694654 31.276566244775882 14.09412323964585 6 20.0943807316735 41.011943668667186 28.733337294749145 10.160338304910175 7 87.51054726959416 3.808406124348842 7.142234634658427 1.538811971398578 8 88.80474181472458 2.9693782557886186 6.812050626894052 1.4138293025927466 9 85.01327074296353 4.565036544060847 8.085744845207678 2.33594786776794 10 47.74308237764177 24.11719848673916 15.44536217244043 12.69435696317864 11 41.36213282627211 22.178184483134274 21.63883772060134 14.820844969992276 12 37.76704894329233 21.433141204666548 24.93523085150633 15.864579000534789 13 24.29367956107513 33.69461445520629 25.420207182046862 16.591498801671715 14 18.59231089191277 35.28938142492127 29.21207439538891 16.90623328777705 15 16.862657713866934 23.126250321865037 42.6436508408105 17.367441123457525 16 19.98039099174045 19.956523461485133 39.870758809198406 20.19232673757601 17 20.425456057995127 20.03060193713233 29.376473151504346 30.167468853368195 18 23.662725057935706 22.794085606195654 33.01602392695149 20.52716540891715 19 28.40721373819003 24.517202448154972 26.053439499277044 21.022144314377957 20 30.184403905955985 23.971022243349775 25.565095965297996 20.27947788539624 21 23.545071008378393 26.802048051973777 29.280606888902096 20.372274050745737 22 23.691544357953536 23.33868124467685 27.30613821379761 25.66363618357201 23 21.38768395824668 27.316140788717885 26.86018182898568 24.435993424049755 24 21.399370134886208 24.26139402222354 35.58727989383406 18.751955949056192 25 20.465367322280983 24.826093845940537 32.666528017113315 22.04201081466516 26 18.805534097886582 31.219125715530733 27.216907322677127 22.758432863905558 27 18.42612949868283 30.388614890962028 29.587022401806408 21.598233208548738 28 17.69475310475964 26.907817854101058 35.333452175807636 20.06397686533167 29 18.96508011963476 24.586923366411156 34.04985441796898 22.398142095985104 30 21.66696377285242 28.038405926278053 30.702755164695862 19.59187513617367 31 27.762196208925072 25.819220789510172 26.79610592825876 19.622477073306 32 28.734921861073147 25.63432170657793 26.52415473290154 19.10660169944738 33 27.96254481351635 26.35807237506685 25.304236734208807 20.375146077207994 34 21.141779071840276 26.75698694713491 28.646780359300415 23.454453621724404 35 21.496424822231468 26.552974032919362 29.81856715590152 22.13203398894765 36 28.86693604294175 26.2655733159031 25.40426248341157 19.46322815774358 37 21.70202230277101 31.657951551884643 26.87919662487373 19.760829520470615 38 22.73634797076475 30.68047220076455 24.544140075663044 22.039039752807653 39 22.492819933844356 29.915621843246775 25.29512547784578 22.296432745063086 40 24.081248638263315 26.43215085071405 25.150731871570898 24.33586863945174 41 19.741715689187316 24.52056965159348 27.654742805078534 28.08297185414067 42 22.253352348129223 26.253689068473072 25.190048923485254 26.302909659912455 43 21.72420623130707 26.112167488660447 27.226216649830647 24.937409630201834 44 21.658842870441898 28.19696159407372 27.457761403925762 22.68643413155862 45 19.899181967635233 33.59310317507477 23.749381028779688 22.75833382851031 46 22.489551765801096 30.420702359023117 26.092855586586644 20.996890288589142 47 21.58813159823321 28.395824667736246 26.877314952363974 23.13872878166657 48 22.04864618614693 26.805811396993285 29.29100560540337 21.854536811456416 49 22.374175530334544 25.64531463545071 29.760532414284867 22.219977419929883 50 21.099689028858915 30.465367322280983 26.613187553231526 21.82175609562858 51 20.318200724939093 31.17376750450611 25.661061263295505 22.846970507259297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 761.0 1 1085.5 2 1410.0 3 5701.0 4 9992.0 5 7195.0 6 4398.0 7 4655.0 8 4912.0 9 5159.5 10 5407.0 11 5524.0 12 5641.0 13 5609.0 14 5577.0 15 5252.5 16 4928.0 17 4766.0 18 4604.0 19 4354.5 20 4105.0 21 4000.5 22 3896.0 23 4081.5 24 4267.0 25 5310.5 26 6794.5 27 7235.0 28 8778.0 29 10321.0 30 11975.0 31 13629.0 32 16157.5 33 18686.0 34 21935.0 35 25184.0 36 28009.0 37 30834.0 38 35975.0 39 41116.0 40 52780.0 41 64444.0 42 71911.0 43 79378.0 44 80202.0 45 81026.0 46 79697.5 47 78369.0 48 75509.5 49 72650.0 50 68654.5 51 64659.0 52 62507.5 53 60356.0 54 56901.5 55 53447.0 56 53756.5 57 54066.0 58 50715.5 59 47365.0 60 42333.5 61 37302.0 62 34649.5 63 31997.0 64 27912.5 65 23828.0 66 19806.5 67 15785.0 68 13871.5 69 11958.0 70 9585.5 71 7213.0 72 6453.0 73 5693.0 74 4313.5 75 2419.5 76 1905.0 77 1607.0 78 1309.0 79 880.0 80 451.0 81 331.0 82 211.0 83 131.0 84 51.0 85 52.0 86 53.0 87 34.0 88 15.0 89 13.5 90 12.0 91 8.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1009740.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.989063619122906 #Duplication Level Percentage of deduplicated Percentage of total 1 77.01535497555415 16.1648018523124 2 6.875565120188659 2.886233474501244 3 2.6744820522906085 1.6840462183118992 4 1.5875179571827962 1.3328206159923897 5 1.100287193542387 1.1546998952283676 6 0.8672211503180939 1.092129593752525 7 0.6856165617323084 1.0073314742766608 8 0.567825248825048 0.9534496217706581 9 0.4797058635046871 0.906171919880955 >10 5.9336159821276535 28.510643204718573 >50 1.477566347127229 22.102891528709474 >100 0.7328804636384129 21.29769034126975 >500 0.0014166503807443546 0.19852510809966126 >1k 4.722167935814515E-4 0.12547817616284132 >5k 4.722167935814515E-4 0.5830869750126346 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5883 0.582625230257294 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1266 0.12537881038683227 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.023669459464812723 0.0 2 0.0 0.0 0.0 0.09457880246400063 0.0 3 0.0 0.0 0.0 0.1349852437261077 0.0 4 0.0 0.0 0.0 0.1843048705607384 0.0 5 0.0 0.0 0.0 0.3043357696040565 0.0 6 0.0 0.0 0.0 0.4198110404658625 0.0 7 0.0 0.0 0.0 0.4902252064887991 0.0 8 0.0 0.0 0.0 0.632836175649177 0.0 9 0.0 0.0 0.0 0.6975062887475983 0.0 10 0.0 0.0 0.0 0.81506130290966 0.0 11 0.0 0.0 0.0 0.9786677758630935 0.0 12 0.0 0.0 0.0 1.098896745696912 0.0 13 0.0 0.0 0.0 1.1491076910887952 0.0 14 0.0 0.0 0.0 1.1726781151583576 0.0 15 0.0 0.0 0.0 1.2092221760057045 0.0 16 0.0 0.0 0.0 1.2888466337869156 0.0 17 0.0 0.0 0.0 1.3729276843543883 0.0 18 0.0 0.0 0.0 1.4973161407887179 0.0 19 0.0 0.0 0.0 1.5537663160813675 0.0 20 0.0 0.0 0.0 1.6187335353655397 0.0 21 0.0 0.0 0.0 1.702220373561511 0.0 22 0.0 0.0 0.0 1.7922435478439995 0.0 23 0.0 0.0 0.0 1.8910808723037613 0.0 24 0.0 0.0 0.0 1.966446808089211 0.0 25 0.0 0.0 0.0 2.029037177887377 0.0 26 0.0 0.0 0.0 2.0975696714005587 0.0 27 0.0 0.0 0.0 2.1741240319290114 0.0 28 0.0 0.0 0.0 2.2475092598094557 0.0 29 0.0 0.0 0.0 2.325747222057163 0.0 30 0.0 0.0 0.0 2.4265652544219303 0.0 31 0.0 0.0 0.0 2.510943411175154 0.0 32 0.0 0.0 0.0 2.5929447184423715 0.0 33 0.0 0.0 0.0 2.676233485847842 0.0 34 0.0 0.0 0.0 2.7707132529165923 0.0 35 0.0 0.0 0.0 2.884108780478143 0.0 36 0.0 0.0 0.0 2.976211698060887 0.0 37 0.0 0.0 0.0 3.0729692792203935 0.0 38 0.0 0.0 0.0 3.1816111078099314 0.0 39 0.0 0.0 0.0 3.3537346247548876 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCACG 25 3.890467E-5 45.000004 1 TGTCGAT 25 3.890467E-5 45.000004 30 TACCCGC 20 7.0328783E-4 45.0 28 CGTATTA 20 7.0328783E-4 45.0 27 CCAATCG 45 3.8380676E-10 45.0 24 ACCTCGT 20 7.0328783E-4 45.0 11 TATTACG 35 1.211738E-7 45.0 1 ACCGTTA 20 7.0328783E-4 45.0 34 ACCCGTA 20 7.0328783E-4 45.0 33 AAGGCGT 20 7.0328783E-4 45.0 28 CGATCAT 20 7.0328783E-4 45.0 10 CCCGCTA 20 7.0328783E-4 45.0 30 TAGTACG 70 0.0 45.0 1 AGTCGAC 20 7.0328783E-4 45.0 28 ACGGTAC 20 7.0328783E-4 45.0 37 GTATTCG 30 2.1652395E-6 44.999996 33 ACGGTCT 335 0.0 43.656715 30 CGTTTTT 4270 0.0 42.892273 1 TCACGAC 360 0.0 42.5 25 CTCACGA 365 0.0 41.91781 24 >>END_MODULE