##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545167_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1329300 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.018102760851576 31.0 31.0 33.0 30.0 34.0 2 31.30190626645603 31.0 31.0 34.0 28.0 34.0 3 31.416736628300608 31.0 31.0 34.0 30.0 34.0 4 35.207904912359886 37.0 35.0 37.0 32.0 37.0 5 35.0626781012563 37.0 35.0 37.0 32.0 37.0 6 35.10395396073121 37.0 35.0 37.0 32.0 37.0 7 35.72904235311818 37.0 35.0 37.0 35.0 37.0 8 35.72760099300384 37.0 35.0 37.0 35.0 37.0 9 37.42117054088618 39.0 37.0 39.0 35.0 39.0 10 36.560469419995485 39.0 35.0 39.0 32.0 39.0 11 36.25286015195968 38.0 35.0 39.0 31.0 39.0 12 35.66711953659821 37.0 35.0 39.0 30.0 39.0 13 35.42847889866847 37.0 35.0 39.0 30.0 39.0 14 36.36472730008275 38.0 35.0 40.0 30.0 41.0 15 36.59592717971865 38.0 35.0 40.0 31.0 41.0 16 36.68066651621154 38.0 35.0 40.0 31.0 41.0 17 36.60472955690965 38.0 35.0 40.0 31.0 41.0 18 36.508451816745655 38.0 35.0 40.0 31.0 41.0 19 36.438961859625365 38.0 35.0 40.0 30.0 41.0 20 36.30534115699992 38.0 35.0 40.0 30.0 41.0 21 36.17789513277665 38.0 34.0 40.0 30.0 41.0 22 36.11879410215903 38.0 34.0 40.0 30.0 41.0 23 36.051452644248855 38.0 34.0 40.0 30.0 41.0 24 35.96749642669074 38.0 34.0 40.0 30.0 41.0 25 35.842344090874896 37.0 34.0 40.0 30.0 41.0 26 35.69904686677199 37.0 34.0 40.0 29.0 41.0 27 35.60601143458963 37.0 34.0 40.0 29.0 41.0 28 35.59302565259911 37.0 34.0 40.0 29.0 41.0 29 35.53223651545927 37.0 34.0 40.0 29.0 41.0 30 35.45234709997743 37.0 34.0 40.0 28.0 41.0 31 35.309549386895355 37.0 34.0 40.0 27.0 41.0 32 35.16499435793275 37.0 34.0 40.0 27.0 41.0 33 34.95987737907169 37.0 33.0 40.0 26.0 41.0 34 34.752293688407434 37.0 33.0 40.0 25.0 41.0 35 34.61443391258557 37.0 33.0 40.0 24.0 41.0 36 34.45779207101482 37.0 33.0 40.0 24.0 41.0 37 34.39671330775596 37.0 33.0 40.0 24.0 41.0 38 34.329652448657185 37.0 33.0 40.0 24.0 41.0 39 34.26388174227037 36.0 33.0 40.0 23.0 41.0 40 34.11063792973746 36.0 33.0 40.0 23.0 41.0 41 34.02210261039645 36.0 33.0 40.0 23.0 41.0 42 33.957154141277364 36.0 33.0 40.0 23.0 41.0 43 33.89758143383736 36.0 33.0 40.0 23.0 41.0 44 33.77624464003611 35.0 33.0 40.0 23.0 41.0 45 33.70282178590235 35.0 32.0 40.0 23.0 41.0 46 33.62438426239374 35.0 32.0 40.0 23.0 41.0 47 33.50894305273452 35.0 32.0 39.0 23.0 41.0 48 33.4351937109757 35.0 32.0 39.0 23.0 41.0 49 33.37524185661626 35.0 32.0 39.0 23.0 41.0 50 33.33575866997668 35.0 32.0 39.0 23.0 41.0 51 33.201231475212516 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 2.0 13 8.0 14 18.0 15 55.0 16 167.0 17 489.0 18 979.0 19 1945.0 20 3207.0 21 5082.0 22 7411.0 23 10349.0 24 14140.0 25 19509.0 26 24766.0 27 28919.0 28 32886.0 29 37170.0 30 43430.0 31 52128.0 32 62946.0 33 78055.0 34 115569.0 35 147224.0 36 109771.0 37 133231.0 38 172247.0 39 227483.0 40 112.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.332505830136164 23.024524185661626 27.584969532836833 14.058000451365379 2 32.45708267509215 24.564056270217407 29.20875648837734 13.770104566313096 3 29.504626495147825 25.462423832092078 31.663281426314597 13.3696682464455 4 26.53103136989393 27.745655608214847 30.919130369367338 14.804182652523885 5 23.52689385390807 31.906642593846385 30.22921838561649 14.337245166629053 6 20.31798691040397 41.512149251485745 27.421424810050404 10.748439028059881 7 87.24178138870083 3.7910930564959 7.175957270744 1.791168284059279 8 88.42172572030393 3.018581208154668 6.813209960129392 1.7464831114120214 9 84.19867599488452 4.688031294666366 8.248025276461297 2.865267433987813 10 43.65651094561047 28.610396449259007 15.023997592717972 12.709095012412547 11 37.209057398630854 23.135334386519222 23.37034529451591 16.28526292033401 12 33.614609192808246 21.981268336718575 27.04423380726698 17.3598886632062 13 24.838862559241708 29.562326036259684 27.6592943654555 17.939517039043103 14 19.856691491762582 32.019559166478594 29.759798390130143 18.363950951628677 15 19.062438877604755 23.114571579026556 38.10012788685774 19.722861656510947 16 21.643722259836004 20.687956067102988 36.453246069359814 21.215075603701198 17 21.979538102760852 20.81140449860829 29.082599864590385 28.126457534040473 18 24.15647333182878 23.31610622131949 31.642969984202214 20.884450462649514 19 28.40412247047318 24.97878582712706 25.82705183179117 20.790039870608588 20 29.62694651320244 24.417437749191304 25.76980365605958 20.18581208154668 21 24.929060407733395 25.862258331452644 28.79823967501693 20.410441585797038 22 24.75505905363725 23.93605657112766 27.181298427743926 24.127585947491163 23 22.818626344692696 26.376062589332733 26.521703152034902 24.28360791393967 24 22.305047769502746 24.180696607236893 33.54133754607688 19.97291807718348 25 22.028661701647483 25.259384638531557 30.742721733243062 21.969231926577898 26 20.7581433837358 29.41969457609268 26.822312495298277 22.999849544873243 27 20.351387948544346 28.195365982095836 28.720755284736327 22.732490784623486 28 20.214473783194162 26.68584969532837 32.096140825998646 21.003535695478824 29 20.75250131648236 24.338975400586772 32.4174377491913 22.491085533739565 30 22.64515158354021 26.57744677649891 30.129918001955918 20.647483638004964 31 27.54682915820357 26.051455653351386 25.786428947566385 20.615286240878657 32 28.342812006319118 24.619198074174378 25.868953584593395 21.169036334913113 33 27.407658165952004 25.65741367637102 25.214398555630783 21.72052960204619 34 21.783720755284737 27.276386067855263 27.665312570525842 23.274580606334162 35 22.372677348980666 25.452869931542914 29.025652599112316 23.1488001203641 36 27.37425712781163 26.20123373203942 25.733167832693898 20.69134130745505 37 22.50214398555631 30.58489430527345 25.847664184157075 21.065297525013165 38 23.35402091326262 29.23124952982773 25.340404724290984 22.07432483261867 39 22.560294892048447 28.398856541036636 25.65575866997668 23.38508989693824 40 25.082675092153767 25.56759196569623 26.15955766192733 23.190175280222675 41 20.805386293537953 24.939742721733243 27.943729782592342 26.31114120213646 42 22.483186639584744 26.22365154592643 25.045663130971185 26.24749868351764 43 22.335289249981194 26.00210637177462 26.56548559392161 25.097118784322575 44 22.75618746708794 26.485970059429775 27.574813811780636 23.183028661701645 45 20.583991574512904 30.57556608741443 24.835025953509366 24.005416384563304 46 23.343413826826147 28.433686902881217 26.58805386293538 21.634845407357258 47 21.78138870081998 27.66418415707515 27.529752501316484 23.024674640788383 48 22.699917249680283 26.2146994658843 28.770706386820134 22.31467689761529 49 22.758068156172424 25.49063416835929 29.35710524336117 22.394192432107126 50 21.146618521026102 28.867072895508915 27.573083577822917 22.41322500564207 51 21.5068833220492 29.08335214022418 26.149326713307758 23.260437824418865 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 720.0 1 1239.5 2 1759.0 3 7590.5 4 13422.0 5 9563.5 6 5705.0 7 5793.5 8 5882.0 9 6216.0 10 6550.0 11 6541.5 12 6533.0 13 6485.5 14 6438.0 15 6170.5 16 5903.0 17 5424.0 18 4945.0 19 4997.5 20 5050.0 21 5253.0 22 5456.0 23 5703.5 24 5951.0 25 6177.0 26 8079.5 27 9756.0 28 11674.0 29 13592.0 30 16524.5 31 19457.0 32 23199.0 33 26941.0 34 31050.0 35 35159.0 36 37676.0 37 40193.0 38 45633.0 39 51073.0 40 59951.5 41 68830.0 42 78710.5 43 88591.0 44 93299.0 45 98007.0 46 95684.0 47 93361.0 48 94823.0 49 96285.0 50 92928.0 51 89571.0 52 85129.0 53 80687.0 54 76930.5 55 73174.0 56 72990.5 57 72807.0 58 69304.5 59 65802.0 60 61796.5 61 57791.0 62 52079.0 63 46367.0 64 42409.5 65 38452.0 66 32297.5 67 26143.0 68 22811.0 69 19479.0 70 16487.5 71 13496.0 72 11772.5 73 10049.0 74 8421.5 75 4924.0 76 3054.0 77 2370.5 78 1687.0 79 1305.5 80 924.0 81 776.0 82 628.0 83 463.0 84 298.0 85 198.5 86 99.0 87 59.0 88 19.0 89 14.5 90 10.0 91 7.0 92 4.0 93 2.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1329300.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.64403204344873 #Duplication Level Percentage of deduplicated Percentage of total 1 76.04568139445091 16.459351648673884 2 6.940131619722655 3.0042486232605774 3 3.002969062104819 1.9498907581704565 4 1.8237140121737665 1.5789009807030179 5 1.2150731344544385 1.3149540928632777 6 0.9131589732501888 1.1858665246673896 7 0.7264062710228514 1.100565242460649 8 0.6210276013332527 1.075323304249842 9 0.5426552789911766 1.0570723422328474 >10 6.1197908808843255 29.972715288545633 >50 1.4226952983836878 21.81633510575727 >100 0.6235612490706578 18.48777816556357 >500 0.002786865917633616 0.3959943349328051 >1k 0.0 0.0 >5k 3.48358239704202E-4 0.6010035879187718 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7971 0.5996389076957798 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02143985556307831 0.0 2 0.0 0.0 0.0 0.08786579402693147 0.0 3 0.0 0.0 0.0 0.12585571353343866 0.0 4 0.0 0.0 0.0 0.17467840216655384 0.0 5 0.0 0.0 0.0 0.3032423079816445 0.0 6 0.0 0.0 0.0 0.4465508162190627 0.0 7 0.0 0.0 0.0 0.5357707063868201 0.0 8 0.0 0.0 0.0 0.7701797938764764 0.0 9 0.0 0.0 0.0 0.8725645076355977 0.0 10 0.0 0.0 0.0 1.0550665763935907 0.0 11 7.522756337922214E-5 0.0 0.0 1.2032648762506581 0.0 12 1.5045512675844429E-4 0.0 0.0 1.3272399006996163 0.0 13 2.2568269013766644E-4 0.0 0.0 1.3839614834875498 0.0 14 2.2568269013766644E-4 0.0 0.0 1.4075829383886256 0.0 15 2.2568269013766644E-4 0.0 0.0 1.4421123899796886 0.0 16 2.2568269013766644E-4 0.0 0.0 1.517114270668773 0.0 17 2.2568269013766644E-4 0.0 0.0 1.6032498307379823 0.0 18 2.2568269013766644E-4 0.0 0.0 1.730459640412247 0.0 19 3.761378168961107E-4 0.0 0.0 1.7848491687354247 0.0 20 3.761378168961107E-4 0.0 0.0 1.8484916873542465 0.0 21 3.761378168961107E-4 0.0 0.0 1.9269540359587753 0.0 22 3.761378168961107E-4 0.0 0.0 2.012939140901226 0.0 23 3.761378168961107E-4 0.0 0.0 2.10832769126608 0.0 24 3.761378168961107E-4 0.0 0.0 2.186112991800196 0.0 25 3.761378168961107E-4 0.0 0.0 2.248852779658467 0.0 26 3.761378168961107E-4 0.0 0.0 2.3136989392913563 0.0 27 3.761378168961107E-4 0.0 0.0 2.386067855262168 0.0 28 3.761378168961107E-4 0.0 0.0 2.4555028962611902 0.0 29 3.761378168961107E-4 0.0 0.0 2.536071616640337 0.0 30 3.761378168961107E-4 0.0 0.0 2.6480102309486195 0.0 31 3.761378168961107E-4 0.0 0.0 2.7370796659896186 0.0 32 3.761378168961107E-4 0.0 0.0 2.8220115850447605 0.0 33 3.761378168961107E-4 0.0 0.0 2.9104039720153465 0.0 34 3.761378168961107E-4 0.0 0.0 2.999247724366208 0.0 35 3.761378168961107E-4 0.0 0.0 3.111336793801249 0.0 36 4.513653802753329E-4 0.0 0.0 3.2009328217859023 0.0 37 4.513653802753329E-4 0.0 0.0 3.2978259234183405 0.0 38 4.513653802753329E-4 0.0 0.0 3.4098397652900023 0.0 39 4.513653802753329E-4 0.0 0.0 3.5763935906116 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGTACG 65 0.0 45.000004 1 CGTAAAT 30 2.1657597E-6 45.000004 16 GTCGTTA 20 7.033687E-4 45.0 39 CGATCGA 25 3.891137E-5 45.0 41 CGTTTTT 5390 0.0 43.079777 1 CGGTCTA 270 0.0 42.5 31 ACGTAAG 70 0.0 41.785713 1 ACTACGG 60 3.6379788E-12 41.250004 2 TAACGCG 55 6.184564E-11 40.90909 1 CACGACG 295 0.0 39.66102 26 CAGGGTA 250 0.0 39.600002 5 TCTACCG 40 3.458772E-7 39.375 1 TACGACT 40 3.458772E-7 39.375 17 CTCACGA 305 0.0 39.098362 24 ATTTACG 75 0.0 39.0 1 CGTATGG 75 0.0 39.0 2 ACGACGG 300 0.0 39.0 27 CATATGC 665 0.0 38.909775 33 ACGGGAC 330 0.0 38.86364 5 GGCGATT 765 0.0 38.82353 8 >>END_MODULE