SRR1545166_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545166_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	956050
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3552	0.37152868573819364	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3055	0.31954395690601956	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCGTC	30	2.1651176E-6	45.000004	45
CTTCGTA	20	7.032689E-4	45.000004	22
AACGTGT	20	7.032689E-4	45.000004	22
TAATACG	30	2.1651176E-6	45.000004	1
GTACCGG	20	7.032689E-4	45.000004	2
GCGACAA	20	7.032689E-4	45.000004	25
ATAGGCG	20	7.032689E-4	45.000004	33
CGACGTG	40	6.8121153E-9	45.000004	30
TAGACTT	20	7.032689E-4	45.000004	43
TTAGCCG	20	7.032689E-4	45.000004	2
TTTCGCG	20	7.032689E-4	45.000004	1
TTTCGAA	30	2.1651176E-6	45.000004	35
TAGGTGC	20	7.032689E-4	45.000004	27
CGTGAAT	20	7.032689E-4	45.000004	3
AGCCACG	20	7.032689E-4	45.000004	45
CACGCAT	40	6.8121153E-9	45.000004	36
TTCGTTA	40	6.8121153E-9	45.000004	15
TTCGTCG	30	2.1651176E-6	45.000004	31
TTCGTAA	30	2.1651176E-6	45.000004	13
GGATACG	40	6.8121153E-9	45.000004	8