##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545166_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 956050 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.121451806913864 31.0 31.0 33.0 30.0 34.0 2 31.400573191778673 31.0 31.0 34.0 30.0 34.0 3 31.512945975628888 31.0 31.0 34.0 30.0 34.0 4 35.27810260969615 37.0 35.0 37.0 33.0 37.0 5 35.13957219810679 37.0 35.0 37.0 32.0 37.0 6 35.19470634381047 37.0 35.0 37.0 32.0 37.0 7 35.78191412583024 37.0 35.0 37.0 35.0 37.0 8 35.79975315098583 37.0 35.0 37.0 35.0 37.0 9 37.56167982846085 39.0 37.0 39.0 35.0 39.0 10 36.76612729459756 39.0 37.0 39.0 32.0 39.0 11 36.33418649652215 38.0 35.0 39.0 32.0 39.0 12 35.019703990377074 35.0 34.0 39.0 30.0 39.0 13 34.4158726008054 35.0 33.0 39.0 26.0 39.0 14 35.23472203336645 36.0 33.0 40.0 26.0 41.0 15 35.75048480727995 36.0 33.0 40.0 30.0 41.0 16 36.032677161236336 36.0 34.0 40.0 31.0 41.0 17 36.00196537837979 36.0 34.0 40.0 31.0 41.0 18 35.94317242822028 36.0 35.0 40.0 31.0 41.0 19 35.84559803357565 36.0 34.0 40.0 30.0 41.0 20 35.68115056743894 36.0 34.0 40.0 30.0 41.0 21 35.48839286648188 35.0 34.0 40.0 30.0 41.0 22 35.37716542021861 35.0 34.0 40.0 30.0 41.0 23 35.39798127712986 35.0 34.0 40.0 30.0 41.0 24 35.29439882851315 35.0 34.0 40.0 30.0 41.0 25 35.20909366664923 35.0 34.0 40.0 29.0 41.0 26 35.05243763401496 35.0 34.0 40.0 29.0 41.0 27 34.995862141101405 35.0 34.0 40.0 29.0 41.0 28 35.02302390042362 35.0 34.0 40.0 29.0 41.0 29 35.0936938444642 36.0 34.0 40.0 29.0 41.0 30 35.056302494639404 36.0 34.0 40.0 29.0 41.0 31 34.81812771298572 35.0 34.0 40.0 29.0 41.0 32 34.60570053867475 35.0 34.0 40.0 27.0 41.0 33 34.36431567386643 35.0 33.0 40.0 26.0 41.0 34 34.24834893572512 35.0 33.0 40.0 25.0 41.0 35 34.100134930181476 35.0 33.0 39.0 25.0 41.0 36 33.847635583912975 35.0 33.0 39.0 23.0 41.0 37 33.79215208409602 35.0 33.0 39.0 23.0 41.0 38 33.82846190052822 35.0 33.0 39.0 24.0 41.0 39 33.82046231891638 35.0 33.0 39.0 23.0 41.0 40 33.61457768945139 35.0 33.0 39.0 23.0 41.0 41 33.66216097484441 35.0 33.0 39.0 23.0 41.0 42 33.6116290988965 35.0 33.0 39.0 23.0 41.0 43 33.490823701689244 35.0 33.0 39.0 23.0 41.0 44 33.39492599759427 35.0 33.0 39.0 23.0 41.0 45 33.36116939490613 35.0 32.0 39.0 23.0 41.0 46 33.31812039119293 35.0 32.0 38.0 23.0 41.0 47 33.22512107107369 35.0 32.0 38.0 23.0 40.0 48 33.23508080121333 35.0 32.0 38.0 23.0 40.0 49 33.26355839129753 35.0 32.0 38.0 24.0 40.0 50 33.150855080801215 35.0 32.0 38.0 23.0 40.0 51 32.95727001725851 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 6.0 15 20.0 16 102.0 17 260.0 18 646.0 19 1292.0 20 2190.0 21 3493.0 22 5387.0 23 7722.0 24 10629.0 25 14761.0 26 18577.0 27 21611.0 28 23747.0 29 26953.0 30 32271.0 31 39423.0 32 49176.0 33 63905.0 34 110997.0 35 165856.0 36 59309.0 37 69707.0 38 92437.0 39 135494.0 40 78.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.51655248156477 24.317138224988234 28.46273730453428 13.703571988912714 2 29.746456775273263 25.589979603577216 31.207259034569322 13.4563045865802 3 27.710893781705977 24.458971811097747 33.92688666910726 13.90324773808901 4 24.34809894879975 28.716908111500445 32.85570838345275 14.079284556247057 5 22.446210972229487 33.354845457873544 31.096909157470844 13.102034412426129 6 19.21081533392605 41.6921709115632 28.17927932639506 10.917734428115685 7 87.83839757334867 4.498927880340986 6.175618429998432 1.4870561163119083 8 90.08399142304273 2.8929449296584906 5.691334135243973 1.331729512054809 9 87.10925160817948 4.420898488572774 6.558861984205847 1.910987919041891 10 58.597249097850536 22.151351916740754 11.333193870613462 7.918205114795251 11 53.886826002824115 18.44788452486795 17.53705350138591 10.128235970922022 12 49.01961194498195 20.045918100517756 19.585691124941164 11.348778829559123 13 21.402437111029755 48.25322943360703 18.69598870351969 11.648344751843522 14 13.93975210501543 49.24125307253805 23.404529051827833 13.414465770618692 15 11.79498980178861 21.364782176664402 53.2509805972491 13.589247424297893 16 12.267559228073846 15.988912713770201 52.1552220072172 19.58830605093876 17 14.311803775953141 17.10234820354584 27.212384289524604 41.37346373097641 18 20.117985461011454 22.51984728832174 36.416714606976626 20.94545264369018 19 30.301867057162283 22.97233408294545 24.582396318184195 22.14340254170807 20 33.996966685842786 21.626797761623344 23.11814235657131 21.258093195962555 21 20.98028345797814 30.742115998117253 27.21698655928037 21.060613984624236 22 22.564719418440458 25.120025103289578 23.909941948642853 28.40531352962711 23 17.956801422519742 32.606558234401966 22.70540243711103 26.73123790596726 24 18.18670571622823 22.415459442497777 42.967836410229594 16.429998431044403 25 15.101302233146802 24.81188222373307 38.691072642644215 21.395742900475916 26 14.721196590136499 37.29919983264474 27.295329742168295 20.68427383505047 27 15.577009570629151 37.97081742586685 27.50881230061189 18.943360702892107 28 12.999843104440146 29.102139009466033 41.14795251294389 16.75006537314994 29 14.02269755765912 22.900998901731082 40.23837665394069 22.83792688666911 30 17.02431881177763 32.769311228492235 32.08576957272109 18.12060038700905 31 30.033261858689396 27.43182887924272 23.96998064954762 18.564928612520266 32 32.438993776476124 27.20684064640971 24.367867789341563 15.986297787772605 33 30.38397573348674 29.22849223366979 22.64253961612886 17.74499241671461 34 18.935097536739708 29.24073008733853 26.245907640813765 25.578264735107997 35 18.58197793002458 26.526646095915485 32.23701689242194 22.65435908163799 36 32.85738193609121 24.554050520370275 25.351079964437005 17.23748757910151 37 19.26248627163851 34.458030437738614 28.06464097066053 18.214842319962347 38 19.7780450813242 34.46995450028764 23.48820668375085 22.26379373463731 39 19.77783588724439 33.87040426755923 26.777156006485015 19.574603838711365 40 25.24292662517651 25.69813294283772 24.458448825898227 24.600491606087548 41 16.460645363736205 24.521416243920296 27.384760211286018 31.633178181057474 42 22.416087024737198 25.309659536635117 22.622666178547146 29.651587260080543 43 22.371737879818003 27.00768788243293 23.91088332200199 26.709690915747085 44 18.878092149992153 31.21468542440249 28.596726112651012 21.310496312954346 45 16.050101982113908 41.7448878196747 20.01495737670624 22.19005282150515 46 22.072067360493698 35.473981486323936 24.328330108257937 18.12562104492443 47 21.343339783484126 29.232362324146226 24.305737147638723 25.11856074473092 48 22.546310339417396 24.17729198263689 30.196433240939278 23.079964437006435 49 20.90288164844935 22.784896187437894 33.88829036138277 22.42393180272998 50 18.369959730139637 35.2040165263323 25.01417289890696 21.411850844621096 51 17.21248888656451 36.89932534909262 22.50541289681502 23.382772867527848 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 719.0 1 899.5 2 1080.0 3 3516.5 4 5953.0 5 4540.0 6 3127.0 7 3523.5 8 3920.0 9 4429.0 10 4938.0 11 5237.5 12 5537.0 13 5385.0 14 5233.0 15 4967.5 16 4702.0 17 4489.5 18 4277.0 19 3855.5 20 3434.0 21 3650.0 22 3866.0 23 3822.5 24 3779.0 25 3503.5 26 4206.0 27 5184.0 28 6959.0 29 8734.0 30 10701.0 31 12668.0 32 13957.5 33 15247.0 34 18974.5 35 22702.0 36 25428.0 37 28154.0 38 32961.0 39 37768.0 40 57688.0 41 77608.0 42 93527.5 43 109447.0 44 109155.5 45 108864.0 46 100253.0 47 91642.0 48 82658.0 49 73674.0 50 71483.0 51 69292.0 52 63284.5 53 57277.0 54 48662.0 55 40047.0 56 40128.5 57 40210.0 58 34468.5 59 28727.0 60 25262.0 61 21797.0 62 19493.0 63 17189.0 64 13896.0 65 10603.0 66 9184.0 67 7765.0 68 6752.5 69 5740.0 70 5119.5 71 4499.0 72 3929.0 73 3359.0 74 2570.5 75 1396.0 76 1010.0 77 974.5 78 939.0 79 597.0 80 255.0 81 151.0 82 47.0 83 30.5 84 14.0 85 9.5 86 5.0 87 5.0 88 5.0 89 4.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 956050.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.582911282793347 #Duplication Level Percentage of deduplicated Percentage of total 1 81.16115687470263 14.270494209367692 2 7.339081880699934 2.5808485121100615 3 2.43784033612216 1.2859299105495314 4 1.1774838925920037 0.8281437928145348 5 0.7749746480754568 0.6813155241762375 6 0.49023116594704935 0.5171814659344386 7 0.38482273652343413 0.47364128251253107 8 0.3185925896847112 0.4481428191825328 9 0.2751913709751674 0.4354798915481976 >10 3.064881276273903 12.567927467156762 >50 0.98379081640414 12.614577048196548 >100 1.5818163854061718 51.64158984314725 >500 0.008943552876401273 0.9620781168922996 >1k 0.001192473716853503 0.6926501164114006 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3552 0.37152868573819364 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3055 0.31954395690601956 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.033680246849014175 0.0 2 0.0 0.0 0.0 0.1039694576643481 0.0 3 0.0 0.0 0.0 0.14120600387009047 0.0 4 0.0 0.0 0.0 0.20605616861042833 0.0 5 0.0 0.0 0.0 0.3326185868939909 0.0 6 0.0 0.0 0.0 0.47894984571936616 0.0 7 0.0 0.0 0.0 0.5772710632289106 0.0 8 0.0 0.0 0.0 0.8402280215469902 0.0 9 0.0 0.0 0.0 0.9668950368704565 0.0 10 0.0 0.0 0.0 1.1716960410020396 0.0 11 0.0 0.0 0.0 1.3558914282725798 0.0 12 0.0 0.0 0.0 1.5350661576277391 0.0 13 1.0459703990377072E-4 0.0 0.0 1.6051461743632656 0.0 14 1.0459703990377072E-4 0.0 0.0 1.6324460017781497 0.0 15 1.0459703990377072E-4 0.0 0.0 1.676167564457926 0.0 16 1.0459703990377072E-4 0.0 0.0 1.7678991684535328 0.0 17 1.0459703990377072E-4 0.0 0.0 1.876366298833743 0.0 18 1.0459703990377072E-4 0.0 0.0 2.058469745306208 0.0 19 1.0459703990377072E-4 0.0 0.0 2.12593483604414 0.0 20 1.0459703990377072E-4 0.0 0.0 2.193818314941687 0.0 21 1.0459703990377072E-4 0.0 0.0 2.2802154699022017 0.0 22 1.0459703990377072E-4 0.0 0.0 2.3675539982218505 0.0 23 1.0459703990377072E-4 0.0 0.0 2.470895873646776 0.0 24 1.0459703990377072E-4 0.0 0.0 2.5476701009361435 0.0 25 1.0459703990377072E-4 0.0 0.0 2.6069766225615814 0.0 26 1.0459703990377072E-4 0.0 0.0 2.66879347314471 0.0 27 1.0459703990377072E-4 0.0 0.0 2.738664295800429 0.0 28 1.0459703990377072E-4 0.0 0.0 2.8039328487003816 0.0 29 1.0459703990377072E-4 0.0 0.0 2.8740128654359083 0.0 30 1.0459703990377072E-4 0.0 0.0 2.9681502013493017 0.0 31 1.0459703990377072E-4 0.0 0.0 3.0531875947910674 0.0 32 1.0459703990377072E-4 0.0 0.0 3.123895193766016 0.0 33 1.0459703990377072E-4 0.0 0.0 3.1999372417760577 0.0 34 1.0459703990377072E-4 0.0 0.0 3.278698812823597 0.0 35 1.0459703990377072E-4 0.0 0.0 3.3943831389571675 0.0 36 1.0459703990377072E-4 0.0 0.0 3.4783745619998956 0.0 37 1.0459703990377072E-4 0.0 0.0 3.5646671199205064 0.0 38 1.0459703990377072E-4 0.0 0.0 3.657444694315151 0.0 39 1.0459703990377072E-4 0.0 0.0 3.756079702944407 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGTC 30 2.1651176E-6 45.000004 45 CTTCGTA 20 7.032689E-4 45.000004 22 AACGTGT 20 7.032689E-4 45.000004 22 TAATACG 30 2.1651176E-6 45.000004 1 GTACCGG 20 7.032689E-4 45.000004 2 GCGACAA 20 7.032689E-4 45.000004 25 ATAGGCG 20 7.032689E-4 45.000004 33 CGACGTG 40 6.8121153E-9 45.000004 30 TAGACTT 20 7.032689E-4 45.000004 43 TTAGCCG 20 7.032689E-4 45.000004 2 TTTCGCG 20 7.032689E-4 45.000004 1 TTTCGAA 30 2.1651176E-6 45.000004 35 TAGGTGC 20 7.032689E-4 45.000004 27 CGTGAAT 20 7.032689E-4 45.000004 3 AGCCACG 20 7.032689E-4 45.000004 45 CACGCAT 40 6.8121153E-9 45.000004 36 TTCGTTA 40 6.8121153E-9 45.000004 15 TTCGTCG 30 2.1651176E-6 45.000004 31 TTCGTAA 30 2.1651176E-6 45.000004 13 GGATACG 40 6.8121153E-9 45.000004 8 >>END_MODULE