SRR1545165_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545165_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1211044
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5457	0.4506029508424137	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2141	0.17678961292901	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACGTA	35	1.2119926E-7	45.000004	21
GCGATAC	45	3.8562575E-10	45.000004	9
CGTAAGA	35	1.2119926E-7	45.000004	13
ACGTAAG	35	1.2119926E-7	45.000004	1
CACGTAC	35	1.2119926E-7	45.000004	22
GTGCATT	40	6.8157533E-9	45.0	9
TTGATAC	50	2.1827873E-11	45.0	12
ATCTCGT	25	3.8909297E-5	45.0	19
ACACGTC	20	7.0334366E-4	45.0	13
GGCGTAT	25	3.8909297E-5	45.0	8
TAGCGAA	20	7.0334366E-4	45.0	16
GTTAGCG	40	6.8157533E-9	45.0	1
CTAAGCG	25	3.8909297E-5	45.0	1
ATGTCGA	20	7.0334366E-4	45.0	25
ACTTACC	20	7.0334366E-4	45.0	12
CCGCTAA	25	3.8909297E-5	45.0	18
ACCACGT	20	7.0334366E-4	45.0	24
CATCGAT	20	7.0334366E-4	45.0	24
GTGACGT	20	7.0334366E-4	45.0	43
TCGACCG	25	3.8909297E-5	45.0	45