SRR1545164_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545164_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1124164
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4925	0.43810333723549233	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1404	0.12489280923423986	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTAG	60	0.0	45.000004	1
ACGTTAG	30	2.1654596E-6	45.000004	1
ATTACGT	30	2.1654596E-6	45.000004	15
TGTTACG	70	0.0	45.000004	1
CCGAACT	35	1.2119017E-7	45.000004	12
CACGTAG	30	2.1654596E-6	45.000004	43
CGGTACT	35	1.2119017E-7	45.000004	37
TCGACCA	30	2.1654596E-6	45.000004	37
GTACGTC	35	1.2119017E-7	45.000004	9
AATCGGC	30	2.1654596E-6	45.000004	38
GACGTAA	25	3.8907507E-5	45.0	39
ATCACGC	20	7.03322E-4	45.0	11
TCTAGCG	20	7.03322E-4	45.0	1
TACGCGG	75	0.0	45.0	2
AACGCCA	25	3.8907507E-5	45.0	26
ACGTAAG	25	3.8907507E-5	45.0	1
CACGTTA	25	3.8907507E-5	45.0	28
ATGTTCG	25	3.8907507E-5	45.0	24
TACGTAC	20	7.03322E-4	45.0	1
CTTACGA	25	3.8907507E-5	45.0	21