SRR1545162_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545162_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1143977
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4278	0.37395856734881905	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1480	0.12937323040585605	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCTCGT	20	7.033271E-4	45.000004	19
TAGCGGA	20	7.033271E-4	45.000004	3
ATCGTTA	40	6.8157533E-9	45.000004	23
CAAGGTA	20	7.033271E-4	45.000004	31
ACTACGC	20	7.033271E-4	45.000004	16
ACTACCG	65	0.0	45.000004	1
CGTGTCA	20	7.033271E-4	45.000004	42
ATGTTAC	20	7.033271E-4	45.000004	10
GTGCGTA	20	7.033271E-4	45.000004	40
GCCAATC	20	7.033271E-4	45.000004	40
GTCGGTT	20	7.033271E-4	45.000004	35
GTACGGA	20	7.033271E-4	45.000004	3
CGAAGTA	20	7.033271E-4	45.000004	14
GACTACG	20	7.033271E-4	45.000004	1
CGAACTA	25	3.890794E-5	45.0	6
ACCGCAT	25	3.890794E-5	45.0	37
CGCGACT	45	3.8562575E-10	45.0	25
TCTAGCG	50	2.1827873E-11	45.0	1
TAGCCGT	35	1.2119199E-7	45.0	44
CACCTAG	25	3.890794E-5	45.0	1