##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545162_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1143977 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.0768337125659 31.0 31.0 33.0 30.0 34.0 2 31.33824543675266 31.0 31.0 34.0 30.0 34.0 3 31.4545030188544 31.0 31.0 34.0 30.0 34.0 4 35.22592062602657 37.0 35.0 37.0 33.0 37.0 5 35.09021422633497 37.0 35.0 37.0 32.0 37.0 6 35.14711746827078 37.0 35.0 37.0 32.0 37.0 7 35.75118817948263 37.0 35.0 37.0 35.0 37.0 8 35.75420659681095 37.0 35.0 37.0 35.0 37.0 9 37.45988074935073 39.0 37.0 39.0 35.0 39.0 10 36.66474238555495 39.0 35.0 39.0 32.0 39.0 11 36.262006141731874 38.0 35.0 39.0 31.0 39.0 12 35.178850623745056 37.0 35.0 39.0 30.0 39.0 13 34.67030980517965 37.0 33.0 39.0 27.0 39.0 14 35.52631215487724 37.0 33.0 40.0 27.0 41.0 15 35.92289268053466 37.0 34.0 40.0 30.0 41.0 16 36.13894510116899 37.0 34.0 40.0 31.0 41.0 17 36.06585272256348 37.0 34.0 40.0 31.0 41.0 18 36.004226483574406 37.0 34.0 40.0 30.0 41.0 19 35.92072830135571 37.0 34.0 40.0 30.0 41.0 20 35.78949139711725 36.0 34.0 40.0 30.0 41.0 21 35.61830788556064 36.0 34.0 40.0 30.0 41.0 22 35.5067794195163 36.0 34.0 40.0 29.0 41.0 23 35.50720862394961 36.0 34.0 40.0 29.0 41.0 24 35.44882807958552 35.0 34.0 40.0 29.0 41.0 25 35.33310110255713 35.0 34.0 40.0 29.0 41.0 26 35.17608395972996 35.0 34.0 40.0 29.0 41.0 27 35.06676270589356 35.0 34.0 40.0 29.0 41.0 28 35.09855268069201 36.0 34.0 40.0 29.0 41.0 29 35.09791980083516 36.0 34.0 40.0 29.0 41.0 30 35.02711155906106 36.0 34.0 40.0 29.0 41.0 31 34.83110149941826 35.0 34.0 40.0 27.0 41.0 32 34.637687645818055 35.0 33.0 40.0 27.0 41.0 33 34.46626986381719 35.0 33.0 40.0 26.0 41.0 34 34.334572285981274 35.0 33.0 40.0 25.0 41.0 35 34.18660777270872 35.0 33.0 40.0 24.0 41.0 36 33.969294837221376 35.0 33.0 40.0 23.0 41.0 37 33.92476072508451 35.0 33.0 40.0 23.0 41.0 38 33.90646490270346 35.0 33.0 40.0 23.0 41.0 39 33.85896482184519 35.0 33.0 39.0 23.0 41.0 40 33.71275034375691 35.0 33.0 39.0 23.0 41.0 41 33.692197482991354 35.0 33.0 39.0 23.0 41.0 42 33.61939269758046 35.0 33.0 39.0 23.0 41.0 43 33.5330351921411 35.0 33.0 39.0 23.0 41.0 44 33.424604690478915 35.0 32.0 39.0 23.0 41.0 45 33.341307561253416 35.0 32.0 39.0 23.0 41.0 46 33.28403630492571 35.0 32.0 39.0 23.0 41.0 47 33.22634371145574 35.0 32.0 39.0 23.0 41.0 48 33.15635191966272 35.0 32.0 38.0 23.0 40.0 49 33.1749947769929 35.0 32.0 38.0 23.0 40.0 50 33.0935919166207 35.0 32.0 38.0 23.0 40.0 51 32.9269312232676 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 4.0 14 15.0 15 40.0 16 143.0 17 377.0 18 863.0 19 1645.0 20 2783.0 21 4476.0 22 6777.0 23 9524.0 24 13078.0 25 17387.0 26 22085.0 27 25771.0 28 29340.0 29 33315.0 30 39571.0 31 47684.0 32 58792.0 33 74846.0 34 124154.0 35 170541.0 36 80887.0 37 93804.0 38 122364.0 39 163583.0 40 125.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.49604056724917 23.616820967554418 29.510121269920635 13.377017195275778 2 30.573429360904985 26.534012484516733 30.601576779952744 12.290981374625538 3 28.60957868908204 25.008282509176322 32.67364641072329 13.708492391018352 4 25.66616286865907 27.797324596560948 31.86550079241104 14.671011742368947 5 23.33989232300999 32.47906207904529 30.261534978413028 13.919510619531685 6 20.48747483559547 41.603458810797775 26.557177285906974 11.351889067699787 7 87.60744315663689 4.318793122589002 6.421020702339296 1.6527430184348113 8 89.27373539852637 3.0531208232333342 5.968826296332881 1.704317481907416 9 85.15949184293041 4.912336524248302 7.295164151027513 2.633007481793777 10 54.463070498795 23.404928595592395 11.536857821442215 10.595143084170399 11 49.988767256684355 18.299668612218603 18.376680650048034 13.334883481049006 12 44.10167337280382 20.427770838050066 21.507949897594095 13.962605891552016 13 23.53124232392784 38.578922478336544 22.041876716052858 15.847958481682761 14 16.603917736108333 40.7650678291609 27.509993644977126 15.12102078975364 15 15.57732366996889 20.994652864524372 47.187137503638624 16.240885961868116 16 18.215576012454797 17.455246040785784 44.78726407960999 19.541913867149425 17 18.055345518310244 18.41418140399676 27.799509955182668 35.73096312251033 18 23.229837662820145 21.920283362340324 33.68817729727084 21.161701677568693 19 30.923436397759748 24.276537028279417 24.397693310267602 20.40233326369324 20 33.60102519543663 23.25903405400633 23.63351710742436 19.506423643132685 21 24.139995821594315 28.925581545782826 26.302626713648962 20.631795918973893 22 24.057826337417623 23.38823245572245 24.922703865549746 27.631237341310182 23 21.49343911634587 29.855407932152485 23.73832690692208 24.912826044579568 24 21.562146791412765 22.53515586414762 38.01754755558896 17.885149788850647 25 18.917775444786038 23.590072178024556 35.15700053410165 22.335151843087754 26 17.82570803433985 32.96263823485962 26.164949120480568 23.046704610319964 27 18.46155997891566 32.82635927120912 27.354570939800364 21.357509810074855 28 16.47568089218577 29.092193287102802 36.850391222900456 17.581734597810968 29 18.110241726887864 23.937369370188385 36.480191472381 21.472197430542746 30 20.14428611764048 29.571660968708287 30.748957365401573 19.535095548249657 31 31.97284560790995 24.631264439757093 24.083700983498794 19.312188968834164 32 32.53579398886516 25.089577849904327 24.735025267116384 17.63960289411413 33 30.06188061473264 26.4432763945429 23.33097605983337 20.163866930891093 34 20.39918634727796 27.511567103184763 27.671972426019053 24.41727412351822 35 21.495362231932987 25.102864830324386 31.05857897492694 22.343193962815686 36 31.0174942328386 26.819595149203174 24.108177000062064 18.054733617896165 37 21.917923175028868 33.31098439916187 26.028495328140338 18.742597097668924 38 22.132787634716433 34.1721905248095 21.35086631986482 22.34415552060924 39 22.706575394435376 31.486559607404697 23.908697465071413 21.898167533088515 40 25.619396194154255 24.340436914378525 23.71594883463566 26.324218056831562 41 18.44661212594309 24.125222797311487 25.598678994420343 31.829486082325083 42 22.121511184228353 23.953103952264772 23.516032227920665 30.409352635586206 43 22.086283203246218 25.05059105209283 24.198388603966688 28.664737140694264 44 19.922778167742884 28.45048458142078 27.990947370445383 23.635789880390952 45 18.543379805712878 35.93726097640075 22.904743714252994 22.614615503633377 46 22.185148827292856 32.48570556925532 25.004523692346964 20.324621911104856 47 22.262160865122286 26.492403256359175 25.763717277532677 25.481718600985857 48 22.92764627260863 24.18929751210033 30.63435715927855 22.248699056012487 49 22.83822139780782 23.486486179355005 31.093282469839867 22.582009952997307 50 19.884053612965996 32.113407874459014 25.059070243545108 22.943468269029886 51 19.065243444579743 33.43266516721927 23.95625086868005 23.545840519520933 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 944.0 1 1313.0 2 1682.0 3 5059.0 4 8436.0 5 6269.5 6 4103.0 7 4270.5 8 4438.0 9 4808.0 10 5178.0 11 5317.5 12 5457.0 13 5428.0 14 5399.0 15 5057.5 16 4716.0 17 4468.5 18 4221.0 19 4101.0 20 3981.0 21 3871.5 22 3762.0 23 3798.5 24 3835.0 25 5074.5 26 7008.0 27 7702.0 28 9536.5 29 11371.0 30 11906.5 31 12442.0 32 14450.5 33 16459.0 34 18417.5 35 20376.0 36 23103.5 37 25831.0 38 32254.0 39 38677.0 40 50936.5 41 63196.0 42 85563.5 43 107931.0 44 110006.0 45 112081.0 46 103301.5 47 94522.0 48 91087.0 49 87652.0 50 85478.0 51 83304.0 52 76057.0 53 68810.0 54 64800.5 55 60791.0 56 59474.5 57 58158.0 58 55607.0 59 53056.0 60 50012.0 61 46968.0 62 41116.5 63 35265.0 64 30850.5 65 26436.0 66 21512.0 67 16588.0 68 13717.5 69 10847.0 70 9412.0 71 7977.0 72 6740.5 73 5504.0 74 4714.0 75 3427.0 76 2930.0 77 2191.5 78 1453.0 79 1125.0 80 797.0 81 529.5 82 262.0 83 178.5 84 95.0 85 77.0 86 59.0 87 41.5 88 24.0 89 17.0 90 10.0 91 10.0 92 10.0 93 6.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1143977.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.8501967409562 #Duplication Level Percentage of deduplicated Percentage of total 1 79.98730205970443 14.277890785440153 2 7.120747367621226 2.542134829093697 3 2.516987913890794 1.347861883726788 4 1.249446079341536 0.8921143333385115 5 0.8185959140089152 0.7306049058200998 6 0.5671962243555797 0.6074738517284779 7 0.4286451144034719 0.5355979736906156 8 0.36164075870086715 0.5164286953887318 9 0.2780397810035698 0.44667583134534883 >10 3.999930573173656 16.85966753712133 >50 1.2476016782312689 15.950654997853588 >100 1.4165017086565594 44.1027104995052 >500 0.00638284998701396 0.6855389011532509 >1k 9.819769210790707E-4 0.5046449747942238 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4278 0.37395856734881905 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1480 0.12937323040585605 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.741434486882166E-5 0.0 0.0 0.02526274566708946 0.0 2 8.741434486882166E-5 0.0 0.0 0.09939011011585024 0.0 3 8.741434486882166E-5 0.0 0.0 0.13619154930562416 0.0 4 8.741434486882166E-5 0.0 0.0 0.19991660671499514 0.0 5 8.741434486882166E-5 0.0 0.0 0.34572373395618966 0.0 6 8.741434486882166E-5 0.0 0.0 0.5074402719635097 0.0 7 8.741434486882166E-5 0.0 0.0 0.6196802907750768 0.0 8 8.741434486882166E-5 0.0 0.0 0.8919759750414562 0.0 9 8.741434486882166E-5 0.0 0.0 1.011646213166873 0.0 10 8.741434486882166E-5 0.0 0.0 1.2120873059510813 0.0 11 8.741434486882166E-5 0.0 0.0 1.3786990472710552 0.0 12 8.741434486882166E-5 0.0 0.0 1.5259922183750199 0.0 13 1.7482868973764333E-4 0.0 0.0 1.582199642125672 0.0 14 1.7482868973764333E-4 0.0 0.0 1.6030042562044517 0.0 15 1.7482868973764333E-4 0.0 0.0 1.6375329224276363 0.0 16 1.7482868973764333E-4 0.0 0.0 1.7158561754301005 0.0 17 1.7482868973764333E-4 0.0 0.0 1.805805536300118 0.0 18 1.7482868973764333E-4 0.0 0.0 1.9488154045055102 0.0 19 1.7482868973764333E-4 0.0 0.0 2.010355103293161 0.0 20 1.7482868973764333E-4 0.0 0.0 2.072943774219237 0.0 21 1.7482868973764333E-4 0.0 0.0 2.151878927635783 0.0 22 1.7482868973764333E-4 0.0 0.0 2.229765108913903 0.0 23 1.7482868973764333E-4 0.0 0.0 2.3251341591657875 0.0 24 1.7482868973764333E-4 0.0 0.0 2.392006132990436 0.0 25 1.7482868973764333E-4 0.0 0.0 2.450923401432022 0.0 26 1.7482868973764333E-4 0.0 0.0 2.5142113871170486 0.0 27 1.7482868973764333E-4 0.0 0.0 2.5706810539023075 0.0 28 1.7482868973764333E-4 0.0 0.0 2.6304724657925815 0.0 29 1.7482868973764333E-4 0.0 0.0 2.6927988936840515 0.0 30 1.7482868973764333E-4 0.0 0.0 2.781262210691299 0.0 31 1.7482868973764333E-4 0.0 0.0 2.8642184239718107 0.0 32 1.7482868973764333E-4 0.0 0.0 2.932751270348967 0.0 33 1.7482868973764333E-4 0.0 0.0 3.006791220452859 0.0 34 1.7482868973764333E-4 0.0 0.0 3.082579457454127 0.0 35 1.7482868973764333E-4 0.0 0.0 3.181095424121289 0.0 36 1.7482868973764333E-4 0.0 0.0 3.2710447849913065 0.0 37 1.7482868973764333E-4 0.0 0.0 3.3564485999281453 0.0 38 1.7482868973764333E-4 0.0 0.0 3.4437755304520983 0.0 39 1.7482868973764333E-4 0.0 0.0 3.5407180389116215 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGT 20 7.033271E-4 45.000004 19 TAGCGGA 20 7.033271E-4 45.000004 3 ATCGTTA 40 6.8157533E-9 45.000004 23 CAAGGTA 20 7.033271E-4 45.000004 31 ACTACGC 20 7.033271E-4 45.000004 16 ACTACCG 65 0.0 45.000004 1 CGTGTCA 20 7.033271E-4 45.000004 42 ATGTTAC 20 7.033271E-4 45.000004 10 GTGCGTA 20 7.033271E-4 45.000004 40 GCCAATC 20 7.033271E-4 45.000004 40 GTCGGTT 20 7.033271E-4 45.000004 35 GTACGGA 20 7.033271E-4 45.000004 3 CGAAGTA 20 7.033271E-4 45.000004 14 GACTACG 20 7.033271E-4 45.000004 1 CGAACTA 25 3.890794E-5 45.0 6 ACCGCAT 25 3.890794E-5 45.0 37 CGCGACT 45 3.8562575E-10 45.0 25 TCTAGCG 50 2.1827873E-11 45.0 1 TAGCCGT 35 1.2119199E-7 45.0 44 CACCTAG 25 3.890794E-5 45.0 1 >>END_MODULE