##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545161_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3180488 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.02635979132762 31.0 31.0 33.0 28.0 34.0 2 31.35068612112355 31.0 31.0 34.0 30.0 34.0 3 31.368468612363888 31.0 31.0 34.0 28.0 34.0 4 35.19502604631742 37.0 35.0 37.0 32.0 37.0 5 35.076280118019625 37.0 35.0 37.0 32.0 37.0 6 35.13289124184716 37.0 35.0 37.0 32.0 37.0 7 35.75044552911377 37.0 35.0 37.0 35.0 37.0 8 35.75024901838963 37.0 35.0 37.0 35.0 37.0 9 37.46068087664535 39.0 37.0 39.0 35.0 39.0 10 36.6247082208768 39.0 35.0 39.0 32.0 39.0 11 36.33326803937006 38.0 35.0 39.0 31.0 39.0 12 35.98735036887421 38.0 35.0 39.0 31.0 39.0 13 35.84017515551073 38.0 35.0 39.0 30.0 39.0 14 36.81805276422989 39.0 35.0 41.0 31.0 41.0 15 36.97954464849419 39.0 35.0 41.0 31.0 41.0 16 37.01644433181323 39.0 35.0 41.0 31.0 41.0 17 36.930289942927 39.0 35.0 41.0 31.0 41.0 18 36.72763047683249 38.0 35.0 40.0 31.0 41.0 19 36.57380030988955 38.0 35.0 40.0 31.0 41.0 20 36.359395476417454 38.0 35.0 40.0 30.0 41.0 21 36.25687127258458 38.0 35.0 40.0 30.0 41.0 22 36.19114362324272 38.0 35.0 40.0 30.0 41.0 23 36.09815726391673 38.0 34.0 40.0 30.0 41.0 24 35.99259704800018 38.0 34.0 40.0 30.0 41.0 25 35.889769746026396 37.0 34.0 40.0 30.0 41.0 26 35.77131905544055 37.0 34.0 40.0 30.0 41.0 27 35.676784191608334 37.0 34.0 40.0 29.0 41.0 28 35.57964878345713 37.0 34.0 40.0 29.0 41.0 29 35.49256623511864 37.0 34.0 40.0 29.0 41.0 30 35.34469615983459 37.0 34.0 40.0 27.0 41.0 31 35.09273419676477 37.0 34.0 40.0 26.0 41.0 32 34.7696384957277 37.0 33.0 40.0 24.0 41.0 33 34.384852576082665 37.0 33.0 40.0 23.0 41.0 34 34.02634910114423 37.0 33.0 40.0 21.0 41.0 35 33.72899347521513 37.0 33.0 40.0 18.0 41.0 36 33.564193922442094 37.0 33.0 40.0 18.0 41.0 37 33.50624778335903 37.0 32.0 40.0 18.0 41.0 38 33.38663249161764 37.0 32.0 40.0 18.0 41.0 39 33.291744222899126 37.0 32.0 40.0 17.0 41.0 40 33.19458932088409 37.0 32.0 40.0 16.0 41.0 41 33.06619455882242 36.0 32.0 40.0 15.0 41.0 42 32.98996286104522 36.0 31.0 40.0 15.0 41.0 43 32.93606672938241 36.0 31.0 40.0 15.0 41.0 44 32.79866202922319 36.0 31.0 40.0 15.0 41.0 45 32.74111079809136 36.0 31.0 40.0 15.0 41.0 46 32.675824904857365 36.0 31.0 40.0 15.0 41.0 47 32.590458130953486 35.0 31.0 40.0 15.0 41.0 48 32.49541579782725 35.0 31.0 40.0 15.0 41.0 49 32.443820256514094 35.0 31.0 39.0 15.0 41.0 50 32.40619332630716 35.0 31.0 39.0 15.0 41.0 51 32.255625237384955 35.0 31.0 39.0 14.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 3.0 13 10.0 14 49.0 15 156.0 16 544.0 17 1556.0 18 3471.0 19 6322.0 20 10469.0 21 15984.0 22 23160.0 23 32684.0 24 46525.0 25 64632.0 26 84213.0 27 92319.0 28 91662.0 29 93415.0 30 102298.0 31 117110.0 32 138544.0 33 169865.0 34 239512.0 35 294683.0 36 254786.0 37 308565.0 38 413832.0 39 573879.0 40 236.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.541724414618137 22.90352926972213 27.0118296311761 20.54291668448364 2 36.85805448723592 23.23228385078013 27.20997532454139 12.699686337442555 3 26.736966151106373 24.183049896745406 36.90043792021853 12.179546031929691 4 24.06797321668876 25.696654098364778 36.504618159225885 13.730754525720581 5 20.724335385010097 30.292584031129817 35.87575240026059 13.107328183599499 6 18.883265712683084 39.002379509056475 32.580409044146684 9.53394573411376 7 82.22659541554629 3.2000120736188915 13.27808814244858 1.295304368386235 8 83.58833612954993 2.149481463221996 12.922953961781966 1.3392284454461076 9 79.22881645835483 4.12465005370245 14.127863397063594 2.5186700908791355 10 36.88974773682529 27.105714594741436 21.1222931826814 14.882244485751873 11 28.385298105196433 23.668223241213298 30.07893757184432 17.867541081745948 12 27.636167783057193 22.00420187090786 33.00496653343764 17.354663812597312 13 22.82093188215142 25.142179439130096 34.57481996473497 17.462068713983513 14 19.27163378701633 27.45182500295552 35.522630489409174 17.753910720618972 15 18.059335548507022 23.51799472282241 40.19483802485656 18.227831703814008 16 21.07673413639668 21.75150480052118 38.42136804163386 18.750393021448282 17 21.24686526092851 21.1602433337274 34.88332608077754 22.709565324566544 18 21.924308470901323 22.746855199579436 36.06248475076781 19.266351578751436 19 24.73626688734559 23.49205530723587 32.664641400942244 19.107036404476293 20 25.16359124763244 23.71570023216563 32.21401872920131 18.906689791000627 21 23.24344565991131 24.403361999793745 34.25166200910049 18.101530331194457 22 22.510413496293648 21.880227185262136 34.21984299264767 21.389516325796546 23 19.87842746144617 24.822417188808764 34.5520876041664 20.747067745578665 24 19.342157555695856 24.402513073465457 37.1829731789587 19.072356191879987 25 19.984417485618557 24.892563656897934 35.12105689441369 20.001961963069817 26 19.13929560495119 27.08527747943083 32.88086608092846 20.894560834689518 27 18.65267216854772 25.76217863422217 35.21164047781347 20.373508719416645 28 18.83333626789348 24.792484675307687 37.168038363924026 19.206140692874804 29 19.40249420843594 24.50372395682675 36.488425675556705 19.605356159180605 30 20.576590762172344 25.14107897907491 35.095557662849224 19.186772595903523 31 23.417192581767328 24.743089739687747 32.74723878851296 19.09247889003197 32 23.32107525637575 25.09250152806739 32.68250029555213 18.903922920004728 33 22.82960979572946 25.49225150354285 31.57043824721238 20.10770045351531 34 20.192058577174322 26.394377215068882 32.40942899328657 21.00413521447023 35 20.207716551673833 26.461914020741474 32.31167669867014 21.018692728914555 36 23.101014687054313 27.208308913600682 29.497548803831364 20.193127595513644 37 20.629129869378534 29.683778086884782 29.29713930692397 20.389952736812717 38 21.177882136326247 29.05371754271672 28.87034945580678 20.898050865150253 39 20.838185838148107 28.138323427096722 28.705028913801904 22.31846182095326 40 22.274757835904428 26.66980664602413 29.610644655788672 21.44479086228277 41 20.292703509650092 26.280023694477073 29.846300316177892 23.58097247969494 42 21.058435057764722 27.65581885547124 28.530558832481052 22.75518725428299 43 20.996431994083927 27.41538405427092 29.291605564932173 22.29657838671298 44 21.388132890298593 27.77633495237209 29.6364268627959 21.199105294533418 45 20.324428200955325 28.925089483123344 29.215107870238782 21.53537444568255 46 21.032086899871967 28.4665120572692 29.796842497126224 20.704558545732603 47 20.557757174370725 27.949547365058443 30.058594781681304 21.43410067888953 48 20.689655172413794 27.36149295328264 30.807064827787435 21.141787046516132 49 21.307736422838257 26.301561269842864 31.462907578962724 20.927794728356155 50 20.4859757370567 27.990956104849317 30.68843523383833 20.83463292425565 51 20.026738035169444 28.786557283033293 30.212753514554997 20.973951167242262 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1533.0 1 2631.5 2 3730.0 3 38205.0 4 72680.0 5 53557.0 6 34434.0 7 34545.5 8 34657.0 9 35298.0 10 35939.0 11 35913.0 12 35887.0 13 35040.5 14 34194.0 15 32388.0 16 30582.0 17 28666.0 18 26750.0 19 25220.5 20 23691.0 21 22785.5 22 21880.0 23 21975.0 24 22070.0 25 23791.5 26 28441.5 27 31370.0 28 36641.5 29 41913.0 30 48781.0 31 55649.0 32 62014.5 33 68380.0 34 81670.0 35 94960.0 36 101463.0 37 107966.0 38 121193.5 39 134421.0 40 150480.0 41 166539.0 42 185080.5 43 203622.0 44 209351.0 45 215080.0 46 221939.5 47 228799.0 48 229207.0 49 229615.0 50 220948.5 51 212282.0 52 204542.5 53 196803.0 54 180466.0 55 164129.0 56 152200.5 57 140272.0 58 132216.5 59 124161.0 60 114731.0 61 105301.0 62 92128.5 63 78956.0 64 69254.5 65 59553.0 66 48603.0 67 37653.0 68 32714.5 69 27776.0 70 23826.5 71 19877.0 72 16160.5 73 12444.0 74 10592.5 75 6799.0 76 4857.0 77 3804.5 78 2752.0 79 2163.0 80 1574.0 81 1144.5 82 715.0 83 578.5 84 442.0 85 306.5 86 171.0 87 147.5 88 124.0 89 78.0 90 32.0 91 21.5 92 11.0 93 7.5 94 4.0 95 4.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3180488.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.659360022483867 #Duplication Level Percentage of deduplicated Percentage of total 1 77.67756664545082 18.378015149352052 2 6.505470067843018 3.07830516901181 3 2.8520437999698744 2.024325931901407 4 1.8005164580989477 1.7039626843428195 5 1.299320225116739 1.5370542495265853 6 0.9853946861167874 1.3988284585847732 7 0.7419694327392751 1.2288165354399645 8 0.6195620654589101 1.1726753570372859 9 0.5199244151614331 1.1070971030505343 >10 5.377089234394203 27.62899243851114 >50 1.0077478469316192 16.882894152945184 >100 0.608428373126021 21.593437719422283 >500 0.003490148362181381 0.5783720908302604 >1k 0.001342364754685146 0.3989627261001443 >5k 0.0 0.0 >10k+ 1.342364754685146E-4 1.288260233943652 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40563 1.2753703205294282 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01685275970228468 0.0 2 0.0 0.0 0.0 0.06011656072904535 0.0 3 0.0 0.0 0.0 0.09957591413644698 0.0 4 0.0 0.0 0.0 0.13884661724867378 0.0 5 0.0 0.0 0.0 0.23307743968850064 0.0 6 0.0 0.0 0.0 0.4161625511556717 0.0 7 0.0 0.0 0.0 0.5496326349918629 0.0 8 0.0 0.0 0.0 0.8189938147856556 0.0 9 3.144171586247142E-5 0.0 0.0 0.9867353689119406 0.0 10 3.144171586247142E-5 0.0 0.0 1.2060413370526788 0.0 11 3.144171586247142E-5 0.0 0.0 1.3554838125470055 0.0 12 3.144171586247142E-5 0.0 0.0 1.4890167798149214 0.0 13 6.288343172494284E-5 0.0 0.0 1.5553273585688736 0.0 14 6.288343172494284E-5 0.0 0.0 1.592365699854865 0.0 15 6.288343172494284E-5 0.0 0.0 1.6215436121752385 0.0 16 6.288343172494284E-5 0.0 0.0 1.6725106335883047 0.0 17 6.288343172494284E-5 0.0 0.0 1.733224586918737 0.0 18 6.288343172494284E-5 0.0 0.0 1.829530562605487 0.0 19 9.432514758741426E-5 0.0 0.0 1.8721969710308606 0.0 20 1.2576686344988568E-4 0.0 0.0 1.92231506611564 0.0 21 1.2576686344988568E-4 0.0 0.0 1.9779669031922145 0.0 22 1.2576686344988568E-4 0.0 0.0 2.038020580489535 0.0 23 1.2576686344988568E-4 0.0 0.0 2.1063434290586853 0.0 24 1.2576686344988568E-4 0.0 0.0 2.162938517611134 0.0 25 1.2576686344988568E-4 0.0 0.0 2.215163207658699 0.0 26 1.572085793123571E-4 0.0 0.0 2.268016732023513 0.0 27 1.572085793123571E-4 0.0 0.0 2.3272529247084095 0.0 28 1.572085793123571E-4 0.0 0.0 2.3853257739063944 0.0 29 1.572085793123571E-4 0.0 0.0 2.4542460150769316 0.0 30 1.572085793123571E-4 0.0 0.0 2.5516838925347307 0.0 31 1.572085793123571E-4 0.0 0.0 2.622616403520466 0.0 32 1.886502951748285E-4 0.0 0.0 2.6923541293034274 0.0 33 1.886502951748285E-4 0.0 0.0 2.7641670083333123 0.0 34 2.2009201103729995E-4 0.0 0.0 2.8436831077495026 0.0 35 2.2009201103729995E-4 0.0 0.0 2.933543531684446 0.0 36 2.2009201103729995E-4 0.0 0.0 3.0110159195695756 0.0 37 2.2009201103729995E-4 0.0 0.0 3.095531251807899 0.0 38 2.5153372689977135E-4 0.0 0.0 3.1936922887305346 0.0 39 2.5153372689977135E-4 0.0 0.0 3.3455557763462713 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 34805 0.0 43.978596 1 TATCGCG 95 0.0 42.63158 1 CGACGGT 880 0.0 41.676132 28 CGGTCTA 875 0.0 41.657143 31 GTCGGTA 55 6.184564E-11 40.90909 11 TCTAGCG 125 0.0 39.600002 1 GTTTTTT 39540 0.0 39.429058 2 TCACGAC 945 0.0 39.285717 25 AGGGCGA 2750 0.0 39.27273 6 ACGGGAT 745 0.0 39.261745 5 TAGGGCG 1330 0.0 39.24812 5 GCGTAAG 195 0.0 39.23077 1 GCGATAC 155 0.0 39.193546 9 GGCGATA 1165 0.0 38.819744 8 ACGGTCT 940 0.0 38.537235 30 ACGACGG 965 0.0 38.238342 27 GGGCGAT 4950 0.0 38.136364 7 GTAGGGT 1615 0.0 37.894737 4 TAGGGTA 1645 0.0 37.88754 5 TACGTAG 155 0.0 37.741936 1 >>END_MODULE