SRR1545159_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545159_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1683131
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8917	0.5297864515596231	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2327	0.1382542416484516	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1920	0.11407311730340657	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTACGC	30	2.1661053E-6	45.000004	41
TGCGCAT	30	2.1661053E-6	45.000004	1
ACGCTTA	30	2.1661053E-6	45.000004	44
CGCAGAT	30	2.1661053E-6	45.000004	23
TGTCGAT	30	2.1661053E-6	45.000004	25
CTATGCG	50	2.1827873E-11	45.0	1
AATCCCG	20	7.0342224E-4	45.0	36
ACACGTA	25	3.89158E-5	45.0	24
AGTTTCG	20	7.0342224E-4	45.0	32
ATTCGGT	45	3.8562575E-10	45.0	29
TTCGTAA	20	7.0342224E-4	45.0	30
TAGCCGT	40	6.8175723E-9	45.0	44
CCGTATG	25	3.89158E-5	45.0	24
GCGATCG	35	1.2123746E-7	45.0	9
CTACCGT	20	7.0342224E-4	45.0	21
TCCGTCG	25	3.89158E-5	45.0	27
CGTACAA	20	7.0342224E-4	45.0	29
ACCCGTT	20	7.0342224E-4	45.0	39
GACGATA	50	2.1827873E-11	45.0	9
CCCGGTA	40	6.8175723E-9	45.0	42