##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545159_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1683131 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.02753142803501 31.0 31.0 33.0 28.0 34.0 2 31.315069949992008 31.0 31.0 34.0 28.0 34.0 3 31.382890577144618 31.0 31.0 34.0 28.0 34.0 4 35.16683252818705 35.0 35.0 37.0 32.0 37.0 5 35.01244525827164 35.0 35.0 37.0 32.0 37.0 6 35.06970105119566 37.0 35.0 37.0 32.0 37.0 7 35.72035866489299 37.0 35.0 37.0 35.0 37.0 8 35.744514241612805 37.0 35.0 37.0 35.0 37.0 9 37.460056882084636 39.0 37.0 39.0 35.0 39.0 10 36.58927023505598 39.0 35.0 39.0 32.0 39.0 11 36.207248871299974 38.0 35.0 39.0 31.0 39.0 12 35.379369757909515 37.0 35.0 39.0 30.0 39.0 13 35.00553373445086 37.0 34.0 39.0 29.0 39.0 14 35.93875402449364 38.0 34.0 40.0 29.0 41.0 15 36.31318001985585 38.0 35.0 40.0 30.0 41.0 16 36.46691434000087 38.0 35.0 40.0 31.0 41.0 17 36.37959790414412 38.0 35.0 40.0 31.0 41.0 18 36.25219249125588 38.0 35.0 40.0 31.0 41.0 19 36.1419550825218 37.0 35.0 40.0 30.0 41.0 20 35.96086341467182 37.0 34.0 40.0 30.0 41.0 21 35.82021244929836 37.0 34.0 40.0 30.0 41.0 22 35.733284574997434 36.0 34.0 40.0 30.0 41.0 23 35.70071967066141 36.0 34.0 40.0 30.0 41.0 24 35.59830161763998 36.0 34.0 40.0 30.0 41.0 25 35.52038433134438 36.0 34.0 40.0 29.0 41.0 26 35.3488658933856 36.0 34.0 40.0 29.0 41.0 27 35.25610662509335 36.0 34.0 40.0 29.0 41.0 28 35.247879695638666 36.0 34.0 40.0 29.0 41.0 29 35.25570677505197 36.0 34.0 40.0 29.0 41.0 30 35.16682718100968 36.0 34.0 40.0 29.0 41.0 31 34.94704630833845 36.0 34.0 40.0 27.0 41.0 32 34.68655024475219 36.0 33.0 40.0 26.0 41.0 33 34.390140161401575 36.0 33.0 40.0 24.0 41.0 34 34.19360822181993 35.0 33.0 40.0 24.0 41.0 35 33.95922896078796 35.0 33.0 40.0 23.0 41.0 36 33.7289373197927 35.0 33.0 40.0 22.0 41.0 37 33.66457750466244 35.0 33.0 40.0 22.0 41.0 38 33.65531916410547 35.0 33.0 40.0 23.0 41.0 39 33.60873336656505 35.0 33.0 40.0 22.0 41.0 40 33.449013178415704 35.0 32.0 40.0 21.0 41.0 41 33.42378697795953 35.0 32.0 40.0 21.0 41.0 42 33.34304281722575 35.0 32.0 40.0 21.0 41.0 43 33.27427276902392 35.0 32.0 40.0 21.0 41.0 44 33.1615299106249 35.0 32.0 39.0 20.0 41.0 45 33.078998604386705 35.0 32.0 39.0 20.0 41.0 46 32.97450287589023 35.0 32.0 39.0 20.0 41.0 47 32.861620990879494 35.0 32.0 39.0 20.0 41.0 48 32.827309341934765 35.0 32.0 39.0 20.0 41.0 49 32.83824372553295 35.0 32.0 39.0 20.0 41.0 50 32.75658163268337 35.0 31.0 39.0 19.0 41.0 51 32.608155871408705 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 4.0 14 20.0 15 76.0 16 266.0 17 693.0 18 1511.0 19 2964.0 20 5070.0 21 7796.0 22 11411.0 23 15641.0 24 22223.0 25 30232.0 26 36998.0 27 41015.0 28 43331.0 29 48097.0 30 56445.0 31 67550.0 32 82382.0 33 103312.0 34 163790.0 35 227866.0 36 120948.0 37 143022.0 38 187127.0 39 263175.0 40 162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.720009315971247 22.996486904465545 30.49780438955732 15.785699390005888 2 31.978616043552165 25.461654499857705 30.125819083600742 12.433910372989388 3 27.222480008983258 25.543822792165315 34.19062449684546 13.043072702005965 4 24.778285231511983 27.027248621765033 33.71852814783876 14.475937998884222 5 21.56451280381622 32.756689764492485 32.47091284041468 13.207884591276613 6 19.14788569635994 40.436424734616615 29.798690654500454 10.616998914522993 7 85.15486911000986 4.6720665236395735 8.531421499574305 1.6416428667762641 8 87.0307777588316 3.135050094140028 8.127293716294217 1.7068784307341496 9 83.80904397815738 4.623704274949484 9.32108077149075 2.2461709754023897 10 48.08853262164383 25.14349744612867 15.727949874371038 11.04002005785646 11 41.71671723710157 21.473194896891567 22.575604632081518 14.234483233925346 12 37.154327262702665 20.66903883298448 27.288666182252 14.88796772206085 13 20.150897345482914 39.16040997403054 26.96076538308664 13.727927297399905 14 14.732246034325314 40.213447438137614 29.874917638615177 15.179388888921896 15 12.441218182066637 22.19328144986932 48.608991219340616 16.75650914872342 16 15.707392948023655 19.10207821019279 45.84610467040296 19.3444241713806 17 16.21175060051773 20.25801913220064 30.083160490775825 33.44706977650581 18 20.28107140798904 23.6449212806371 36.6436124104422 19.43039490093166 19 27.296508709066615 25.56758802493686 27.525308487574645 19.61059477842188 20 29.1621983077966 22.693658425874162 27.996038335696984 20.148104930632257 21 20.235858052641177 28.315858955720024 30.147742510832494 21.30054048080631 22 20.898551568475657 25.339144724920402 26.934088909300584 26.828214797303357 23 17.974358502101143 30.815248486303204 26.309003874327075 24.901389137268577 24 17.877574591639032 24.779295253904777 39.707723284759176 17.63540686969701 25 16.504894746754708 27.152491398471064 35.525101730049535 20.817512124724693 26 17.338400873134653 34.00377035417921 28.151641197268663 20.50618757541748 27 17.056782864791867 34.25586006080335 28.830079179814287 19.857277894590496 28 15.56509861680404 28.205469449496206 37.37724514609974 18.852186787600015 29 15.708521796580301 23.798801162832838 37.60325250975711 22.889424530829743 30 17.914826594008428 29.861371455935398 32.923284046221 19.300517903835175 31 26.978351655337583 28.131916054068277 25.957575494717883 18.932156795876256 32 28.69348850445984 25.804586808751072 26.821322879799613 18.680601806989475 33 27.53392338445433 27.78173534917959 25.59569041268921 19.088650853676867 34 20.20621092475868 28.009346866049047 27.276248848128876 24.508193361063398 35 19.29142770230006 27.69606168503818 31.66735090732688 21.34515970533488 36 29.41339681819181 26.667027106030368 26.02887119303251 17.89070488274531 37 20.62691495789692 33.79932993926201 27.653521918377123 17.920233184463953 38 19.67933571421357 32.89048802499627 25.94925766324784 21.480918597542317 39 19.817292890452375 34.18723795117552 26.200753239052695 19.79471591931941 40 23.85453063368211 27.83496947058785 25.67874990122575 22.63174999450429 41 18.14237869779595 26.41410561625922 26.873725218060862 28.56979046788396 42 20.33192900612014 27.54533069618467 24.58204382190097 27.540696475794217 43 21.71898681683125 26.95773531590827 26.052517599640197 25.270760267620286 44 19.979015299462727 29.028162394965097 28.992811611217427 22.000010694354746 45 17.53707821910475 37.23471316255241 23.579566890515355 21.648641727827485 46 21.829673388464713 32.97503284058104 26.636667021164723 18.55862674978953 47 21.4913752999618 29.017230387890187 26.229330931460478 23.26206338068754 48 22.230295799910998 24.72915061275682 30.283085511466428 22.757468075865752 49 20.490977826443693 25.067448701259735 31.938749865577904 22.50282360671867 50 18.80293334268099 32.41583691346663 28.102625404677354 20.678604339175024 51 18.094372927597433 32.627109832805644 25.911946247796518 23.3665709918004 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2258.0 1 2217.0 2 2176.0 3 8731.5 4 15287.0 5 12053.5 6 8820.0 7 9565.5 8 10311.0 9 11021.0 10 11731.0 11 12115.5 12 12500.0 13 12479.5 14 12459.0 15 12174.0 16 11889.0 17 11426.5 18 10964.0 19 10533.5 20 10103.0 21 9866.0 22 9629.0 23 9807.5 24 9986.0 25 10376.0 26 13950.0 27 17134.0 28 19240.0 29 21346.0 30 23155.5 31 24965.0 32 30583.0 33 36201.0 34 40696.0 35 45191.0 36 50507.5 37 55824.0 38 66674.0 39 77524.0 40 97090.5 41 116657.0 42 136151.5 43 155646.0 44 158684.5 45 161723.0 46 155855.0 47 149987.0 48 143619.0 49 137251.0 50 127746.0 51 118241.0 52 108097.0 53 97953.0 54 87109.5 55 76266.0 56 68665.5 57 61065.0 58 55680.0 59 50295.0 60 44723.0 61 39151.0 62 35285.5 63 31420.0 64 27287.5 65 23155.0 66 18604.5 67 14054.0 68 12478.5 69 10903.0 70 9634.5 71 8366.0 72 7134.0 73 5902.0 74 4820.0 75 2675.0 76 1612.0 77 1495.0 78 1378.0 79 1084.5 80 791.0 81 553.5 82 316.0 83 227.0 84 138.0 85 92.0 86 46.0 87 27.0 88 8.0 89 5.5 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1683131.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.789192065503638 #Duplication Level Percentage of deduplicated Percentage of total 1 80.25455125296399 17.48681831381638 2 7.3918497055871395 3.2212486590874936 3 2.9415174466816305 1.922798658293277 4 1.5990753665258175 1.3937024115378667 5 0.9864096108925703 1.0746534233498461 6 0.678976999823533 0.8876616154328635 7 0.5089997411786498 0.776348518528327 8 0.4120115372119229 0.7181918814011191 9 0.32047234393465085 0.6284550108306822 >10 3.120843040510569 14.671917357157726 >50 0.7118203825535498 11.123553336451268 >100 1.064444897599844 44.22839025729463 >500 0.008206976851066786 1.0815835000629956 >1k 5.471317900711192E-4 0.25315431935891664 >5k 2.735658950355596E-4 0.5315227373966235 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8917 0.5297864515596231 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2327 0.1382542416484516 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1920 0.11407311730340657 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.020853991757029015 0.0 2 0.0 0.0 0.0 0.10064576078748476 0.0 3 0.0 0.0 0.0 0.16813902185866697 0.0 4 0.0 0.0 0.0 0.2579121886531708 0.0 5 0.0 0.0 0.0 0.4729281321537064 0.0 6 0.0 0.0 0.0 0.7855003561814262 0.0 7 0.0 0.0 0.0 0.994159099915574 0.0 8 0.0 0.0 0.0 1.5197272226582483 0.0 9 5.941308192885759E-5 0.0 0.0 1.8024146664757525 0.0 10 5.941308192885759E-5 0.0 0.0 2.225435809809219 0.0 11 5.941308192885759E-5 0.0 0.0 2.551078911861287 0.0 12 5.941308192885759E-5 0.0 0.0 2.82033899916287 0.0 13 5.941308192885759E-5 0.0 0.0 2.9500377570135656 0.0 14 5.941308192885759E-5 0.0 0.0 3.000835942062739 0.0 15 5.941308192885759E-5 0.0 0.0 3.0590607623530195 0.0 16 5.941308192885759E-5 0.0 0.0 3.1850759091241265 0.0 17 5.941308192885759E-5 0.0 0.0 3.3249343039846573 0.0 18 5.941308192885759E-5 0.0 0.0 3.5319888945067257 0.0 19 5.941308192885759E-5 0.0 0.0 3.62693099942904 0.0 20 5.941308192885759E-5 0.0 0.0 3.7424300306987393 0.0 21 5.941308192885759E-5 0.0 0.0 3.871118766156645 0.0 22 5.941308192885759E-5 0.0 0.0 4.0005798716796255 0.0 23 5.941308192885759E-5 0.0 0.0 4.160579301314039 0.0 24 5.941308192885759E-5 0.0 0.0 4.273285917733082 0.0 25 5.941308192885759E-5 0.0 0.0 4.365079129313167 0.0 26 5.941308192885759E-5 0.0 0.0 4.464417802298217 0.0 27 5.941308192885759E-5 0.0 0.0 4.564766497676057 0.0 28 5.941308192885759E-5 0.0 0.0 4.677235461767385 0.0 29 5.941308192885759E-5 0.0 0.0 4.794041580839519 0.0 30 1.1882616385771517E-4 0.0 0.0 4.956179881423371 0.0 31 1.1882616385771517E-4 0.0 0.0 5.080769114228185 0.0 32 1.1882616385771517E-4 0.0 0.0 5.197634646382248 0.0 33 1.1882616385771517E-4 0.0 0.0 5.322283292268992 0.0 34 1.7823924578657277E-4 0.0 0.0 5.441525347700209 0.0 35 1.7823924578657277E-4 0.0 0.0 5.604257779103349 0.0 36 1.7823924578657277E-4 0.0 0.0 5.733659471544401 0.0 37 1.7823924578657277E-4 0.0 0.0 5.864427664869817 0.0 38 1.7823924578657277E-4 0.0 0.0 5.999295360848324 0.0 39 1.7823924578657277E-4 0.0 0.0 6.142480888296871 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTACGC 30 2.1661053E-6 45.000004 41 TGCGCAT 30 2.1661053E-6 45.000004 1 ACGCTTA 30 2.1661053E-6 45.000004 44 CGCAGAT 30 2.1661053E-6 45.000004 23 TGTCGAT 30 2.1661053E-6 45.000004 25 CTATGCG 50 2.1827873E-11 45.0 1 AATCCCG 20 7.0342224E-4 45.0 36 ACACGTA 25 3.89158E-5 45.0 24 AGTTTCG 20 7.0342224E-4 45.0 32 ATTCGGT 45 3.8562575E-10 45.0 29 TTCGTAA 20 7.0342224E-4 45.0 30 TAGCCGT 40 6.8175723E-9 45.0 44 CCGTATG 25 3.89158E-5 45.0 24 GCGATCG 35 1.2123746E-7 45.0 9 CTACCGT 20 7.0342224E-4 45.0 21 TCCGTCG 25 3.89158E-5 45.0 27 CGTACAA 20 7.0342224E-4 45.0 29 ACCCGTT 20 7.0342224E-4 45.0 39 GACGATA 50 2.1827873E-11 45.0 9 CCCGGTA 40 6.8175723E-9 45.0 42 >>END_MODULE