SRR1545157_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545157_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2377941
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7288	0.30648363437107984	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2925	0.12300557499113729	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2453	0.10315647024043068	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGTA	20	7.034809E-4	45.000004	45
CGGCGGA	25	3.8920676E-5	45.000004	4
CGTGCTA	20	7.034809E-4	45.000004	28
CCGGATA	20	7.034809E-4	45.000004	20
CCAATCG	50	2.1827873E-11	45.000004	40
GCCGGAT	20	7.034809E-4	45.000004	19
GCGCCGA	20	7.034809E-4	45.000004	32
CCGTCCC	20	7.034809E-4	45.000004	11
ATATCCG	85	0.0	45.000004	1
TCGTGAC	40	6.8212103E-9	45.000004	22
CTACGCT	40	6.8212103E-9	45.000004	21
CGGGCTA	165	0.0	45.000004	6
AACGACG	40	6.8212103E-9	45.000004	43
CTCGCTA	40	6.8212103E-9	45.000004	27
ACGCTAC	40	6.8212103E-9	45.000004	23
ACCGTAG	90	0.0	45.000004	1
TCGAGCC	20	7.034809E-4	45.000004	16
CCAACGC	20	7.034809E-4	45.000004	13
ATTGCGA	20	7.034809E-4	45.000004	1
TCGGTTA	20	7.034809E-4	45.000004	36