##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545157_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2377941 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.83371917133352 31.0 31.0 33.0 28.0 33.0 2 31.140058983801534 31.0 31.0 33.0 30.0 34.0 3 31.314684006037155 31.0 31.0 34.0 28.0 34.0 4 35.14521848944108 35.0 35.0 37.0 32.0 37.0 5 35.017931479376486 35.0 35.0 37.0 32.0 37.0 6 35.094023779395705 37.0 35.0 37.0 32.0 37.0 7 35.566149033975194 36.0 35.0 37.0 35.0 37.0 8 35.648398761785934 37.0 35.0 37.0 35.0 37.0 9 37.49736810122707 39.0 37.0 39.0 35.0 39.0 10 36.95022374398692 39.0 37.0 39.0 32.0 39.0 11 36.414359313372366 38.0 35.0 39.0 32.0 39.0 12 35.102949148023434 35.0 34.0 39.0 30.0 39.0 13 34.683021992555744 35.0 33.0 39.0 29.0 39.0 14 35.309281012438916 36.0 33.0 40.0 27.0 41.0 15 35.78333020037083 36.0 34.0 40.0 30.0 41.0 16 35.95982911266512 36.0 34.0 40.0 31.0 41.0 17 35.77096530149402 35.0 34.0 40.0 31.0 41.0 18 35.889024159977055 36.0 35.0 40.0 31.0 41.0 19 35.774411139721295 36.0 34.0 40.0 31.0 41.0 20 35.52268748467687 35.0 34.0 40.0 30.0 41.0 21 35.3618958586441 35.0 34.0 40.0 30.0 41.0 22 35.187056365149516 35.0 34.0 40.0 29.0 41.0 23 35.13458870510244 35.0 34.0 39.0 29.0 41.0 24 35.28964722001093 35.0 34.0 39.0 30.0 41.0 25 35.19592748516469 35.0 34.0 39.0 30.0 41.0 26 34.942033044554094 35.0 34.0 39.0 29.0 41.0 27 34.92873078011608 35.0 34.0 39.0 29.0 41.0 28 35.04605244621292 36.0 34.0 39.0 29.0 41.0 29 35.041488413715896 36.0 34.0 39.0 29.0 41.0 30 35.008900136714914 36.0 34.0 39.0 29.0 41.0 31 34.76317158415621 35.0 34.0 39.0 29.0 41.0 32 34.63122844511281 35.0 34.0 39.0 29.0 41.0 33 34.40880030244653 35.0 33.0 39.0 27.0 41.0 34 34.24276380280251 35.0 34.0 39.0 26.0 41.0 35 34.000073172547175 35.0 33.0 39.0 24.0 41.0 36 33.7681313371526 35.0 33.0 39.0 23.0 41.0 37 33.790858982624044 35.0 33.0 39.0 24.0 41.0 38 33.83397948056743 35.0 33.0 39.0 24.0 41.0 39 33.83148068013462 35.0 33.0 39.0 24.0 41.0 40 33.476080777445695 35.0 32.0 39.0 23.0 41.0 41 33.58595440341035 35.0 33.0 39.0 23.0 41.0 42 33.56564103146378 35.0 33.0 39.0 23.0 41.0 43 33.51914954996781 35.0 33.0 39.0 23.0 41.0 44 33.50483590635764 35.0 33.0 39.0 23.0 41.0 45 33.59173923995591 35.0 33.0 39.0 23.0 41.0 46 33.60745661898255 35.0 33.0 39.0 23.0 41.0 47 33.52833817155262 35.0 33.0 39.0 23.0 41.0 48 33.5594440736755 35.0 33.0 39.0 23.0 41.0 49 33.63777276223422 35.0 33.0 39.0 24.0 41.0 50 33.39290125364759 35.0 33.0 39.0 24.0 41.0 51 33.10225442935716 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 2.0 12 2.0 13 7.0 14 12.0 15 56.0 16 186.0 17 585.0 18 1503.0 19 2937.0 20 5089.0 21 8254.0 22 12294.0 23 18111.0 24 25311.0 25 34465.0 26 44215.0 27 51699.0 28 57881.0 29 66897.0 30 80155.0 31 98118.0 32 125815.0 33 164212.0 34 294928.0 35 430773.0 36 137741.0 37 165966.0 38 234476.0 39 316120.0 40 129.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.96925407316666 24.907178100718227 30.536544010133138 12.587023815981976 2 28.825315682769254 26.973377388253116 32.044234907426215 12.157072021551418 3 27.002772566686893 26.347710056725543 34.40434392611086 12.245173450476694 4 23.220340622412415 29.92235719893807 33.69928017558047 13.158022003069043 5 20.839541435216432 32.82158808818217 32.89345698652742 13.445413490073976 6 19.73690684503947 41.62390908773599 29.28344311318069 9.355740954043855 7 88.65955883682564 4.4686138133788855 5.772262642344785 1.0995647074506893 8 91.67477241865967 2.1942091919017335 5.067198891814389 1.063819497624205 9 88.35652356387311 4.005944638660084 6.208059829911676 1.4294719675551244 10 61.05256606450706 24.009006110748754 9.916436110063286 5.021991714680894 11 53.1462302891451 16.378034610614815 21.95643205613596 8.519303044104122 12 47.856948511338175 21.46958229829924 21.45742892695824 9.216040263404349 13 17.208332755102 52.037119508011344 22.091422789715978 8.663124947170681 14 9.944527639668099 52.189772580564444 27.94392291482421 9.921776864943242 15 8.763379747436963 23.13051501277786 58.67365927077248 9.432445969012688 16 10.386170220371321 17.703509044168882 56.4657407395726 15.444579995887198 17 10.490630339440719 17.41359436588208 32.08738147834618 40.008393816331015 18 15.62877295946367 22.18970109014479 46.2472365798815 15.934289370510033 19 32.656991910228214 19.35056420659722 29.866552618420727 18.125891264753836 20 31.73775127305514 22.19865841919543 29.496232244618348 16.56735806313109 21 16.49347061176034 34.133773714318394 33.11553987251997 16.257215801401294 22 18.515808424178733 23.311890412756245 24.60986206133794 33.56243910172708 23 11.655461594715764 34.871260472820815 27.62974354704343 25.843534385419993 24 10.278892537703838 20.827219851123306 56.01051497913531 12.883372632037549 25 10.044151642113913 23.722665953444597 49.91553617183942 16.31764623260207 26 9.762058856800905 41.42722632731426 31.019440768294928 17.791274047589912 27 9.565880734635552 50.30869142674271 28.315546937455554 11.809880901166176 28 9.33597595566921 34.309892465792885 43.81959014121881 12.534541437319092 29 9.625217782947516 25.664892442663636 42.77860552469552 21.931284249693327 30 14.35666402152114 42.10613299488928 30.322577389430606 13.21462559415898 31 31.9323313740753 28.866107275159475 28.282913663543376 10.918647687221844 32 34.63336558812855 22.714272557645458 31.7404006239011 10.91196123032489 33 35.272069407945786 26.211205408376408 23.713540411641837 14.803184772035976 34 18.925112103285993 26.50986714977369 25.871247436332524 28.69377331060779 35 17.307031587411124 25.073246140253268 37.60989023697392 20.009832035361686 36 38.36196945172315 23.826747593821715 24.845444020688486 12.96583893376665 37 15.966922644422214 43.99200821214656 28.157637216398555 11.883431927032673 38 16.22138648519875 42.63162963252663 23.40398689454448 17.74299698773014 39 19.395434958226467 39.54198190787744 26.529085456703932 14.533497677192159 40 27.47755305955867 23.155704872408524 26.715170813741807 22.651571254291003 41 13.264963260232276 23.95042601982135 28.47307817982027 34.3115325401261 42 16.67392084160204 20.477253220328006 28.56412333190773 34.28470260616222 43 16.950294393342812 20.24061993127668 31.0244030444826 31.78468263089791 44 11.590321206455501 30.412739424569406 37.48234291767542 20.514596451299674 45 11.513910563802888 50.76896356974374 23.587885485804737 14.129240380648636 46 18.374131233701764 40.93183977230722 25.61392397876987 15.080105015221152 47 17.138398303406184 29.552793782520254 25.82170878083182 27.487099133241742 48 18.222865916353687 27.082925943074283 40.4599609494096 14.234247191162439 49 22.834881100918818 25.89576444495469 38.627535334139914 12.641819119986577 50 19.09677321682918 43.18967543770009 24.016996216474674 13.696555128996051 51 16.327360519037267 39.38121257003433 25.052009280297533 19.23941763063087 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3451.0 1 3747.0 2 4043.0 3 9390.5 4 14738.0 5 11919.0 6 9100.0 7 9821.0 8 10542.0 9 11417.0 10 12292.0 11 13030.5 12 13769.0 13 13164.0 14 12559.0 15 11847.5 16 11136.0 17 10844.0 18 10552.0 19 11667.5 20 12783.0 21 12223.0 22 11663.0 23 13387.5 24 15112.0 25 19919.5 26 25121.5 27 25516.0 28 35131.0 29 44746.0 30 55773.0 31 66800.0 32 76178.5 33 85557.0 34 95626.5 35 105696.0 36 105937.5 37 106179.0 38 130415.0 39 154651.0 40 214087.5 41 273524.0 42 323582.5 43 373641.0 44 357374.5 45 341108.0 46 291354.5 47 241601.0 48 203506.5 49 165412.0 50 136107.5 51 106803.0 52 80061.0 53 53319.0 54 38804.0 55 24289.0 56 18673.5 57 13058.0 58 11374.0 59 9690.0 60 8349.0 61 7008.0 62 5773.5 63 4539.0 64 3973.5 65 3408.0 66 2634.0 67 1860.0 68 1489.5 69 1119.0 70 909.0 71 699.0 72 652.5 73 606.0 74 464.0 75 242.0 76 162.0 77 117.0 78 72.0 79 47.0 80 22.0 81 33.0 82 44.0 83 28.0 84 12.0 85 9.0 86 6.0 87 5.0 88 4.0 89 2.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2377941.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.627902627587003 #Duplication Level Percentage of deduplicated Percentage of total 1 80.19747287134862 12.533182970119865 2 8.494703138443091 2.655087869956927 3 2.8892209346676134 1.3545739030971413 4 1.445568498872609 0.9036481496755298 5 0.8922097275199692 0.6971683372534005 6 0.5938998681682137 0.5568845586161761 7 0.4655119775040486 0.509248309948612 8 0.3510273819430393 0.43886573956980884 9 0.27074343629758085 0.3808036853565209 >10 2.689746395355154 9.115703864560297 >50 0.546810808854631 6.096832606887029 >100 0.8760302948391425 33.40997063608608 >500 0.2651606662228387 26.592127388332422 >1k 0.02162370366750978 4.448044894223896 >5k 2.7029629584387224E-4 0.30785708631627495 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7288 0.30648363437107984 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2925 0.12300557499113729 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2453 0.10315647024043068 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04655287915049196 0.0 2 0.0 0.0 0.0 0.15067657271563928 0.0 3 0.0 0.0 0.0 0.20656525960904834 0.0 4 0.0 0.0 0.0 0.3116561764989123 0.0 5 0.0 0.0 0.0 0.5238145101161047 0.0 6 0.0 0.0 0.0 0.7048955377782712 0.0 7 0.0 0.0 0.0 0.8327792825810229 0.0 8 0.0 0.0 0.0 1.133753949320021 0.0 9 0.0 0.0 0.0 1.242082961688284 0.0 10 0.0 0.0 0.0 1.446924040588055 0.0 11 0.0 0.0 0.0 1.637719354685419 0.0 12 0.0 0.0 0.0 1.8270428072016927 0.0 13 0.0 0.0 0.0 1.8916365040175513 0.0 14 0.0 0.0 0.0 1.9166581508960903 0.0 15 0.0 0.0 0.0 1.9595524026878717 0.0 16 0.0 0.0 0.0 2.0548869799545066 0.0 17 0.0 0.0 0.0 2.1755796296039303 0.0 18 0.0 0.0 0.0 2.37419683667509 0.0 19 0.0 0.0 0.0 2.456200553335848 0.0 20 0.0 0.0 0.0 2.5363118765352044 0.0 21 0.0 0.0 0.0 2.640771995604601 0.0 22 0.0 0.0 0.0 2.7554089861775375 0.0 23 0.0 0.0 0.0 2.8939321875521724 0.0 24 0.0 0.0 0.0 2.9924628071091757 0.0 25 0.0 0.0 0.0 3.074592683334027 0.0 26 0.0 0.0 0.0 3.161516622994431 0.0 27 0.0 0.0 0.0 3.248734934971053 0.0 28 0.0 0.0 0.0 3.34377513992147 0.0 29 0.0 0.0 0.0 3.448109099426773 0.0 30 0.0 0.0 0.0 3.5949167788435457 0.0 31 0.0 0.0 0.0 3.7297392996714382 0.0 32 0.0 0.0 0.0 3.850936587577236 0.0 33 0.0 0.0 0.0 3.972554407363345 0.0 34 0.0 0.0 0.0 4.0919013549957715 0.0 35 0.0 0.0 0.0 4.261922394205744 0.0 36 0.0 0.0 0.0 4.39796445748654 0.0 37 0.0 0.0 0.0 4.5441833922708765 0.0 38 0.0 0.0 0.0 4.68665959332044 0.0 39 0.0 0.0 0.0 4.823963252242171 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTA 20 7.034809E-4 45.000004 45 CGGCGGA 25 3.8920676E-5 45.000004 4 CGTGCTA 20 7.034809E-4 45.000004 28 CCGGATA 20 7.034809E-4 45.000004 20 CCAATCG 50 2.1827873E-11 45.000004 40 GCCGGAT 20 7.034809E-4 45.000004 19 GCGCCGA 20 7.034809E-4 45.000004 32 CCGTCCC 20 7.034809E-4 45.000004 11 ATATCCG 85 0.0 45.000004 1 TCGTGAC 40 6.8212103E-9 45.000004 22 CTACGCT 40 6.8212103E-9 45.000004 21 CGGGCTA 165 0.0 45.000004 6 AACGACG 40 6.8212103E-9 45.000004 43 CTCGCTA 40 6.8212103E-9 45.000004 27 ACGCTAC 40 6.8212103E-9 45.000004 23 ACCGTAG 90 0.0 45.000004 1 TCGAGCC 20 7.034809E-4 45.000004 16 CCAACGC 20 7.034809E-4 45.000004 13 ATTGCGA 20 7.034809E-4 45.000004 1 TCGGTTA 20 7.034809E-4 45.000004 36 >>END_MODULE