##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545155_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1615209 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.849508020324304 31.0 31.0 33.0 30.0 33.0 2 31.15416952233426 31.0 31.0 33.0 30.0 34.0 3 31.316648186086134 31.0 31.0 34.0 28.0 34.0 4 35.209999448987716 37.0 35.0 37.0 33.0 37.0 5 35.07128303519854 37.0 35.0 37.0 32.0 37.0 6 35.14402841985155 37.0 35.0 37.0 32.0 37.0 7 35.536917513461106 36.0 35.0 37.0 35.0 37.0 8 35.603300873137776 37.0 35.0 37.0 35.0 37.0 9 37.45659663857742 39.0 37.0 39.0 35.0 39.0 10 36.89150568130812 39.0 37.0 39.0 32.0 39.0 11 36.47445810418342 38.0 35.0 39.0 32.0 39.0 12 35.294365001680895 35.0 35.0 39.0 31.0 39.0 13 34.883138962202416 35.0 34.0 39.0 30.0 39.0 14 35.57475038833984 36.0 34.0 40.0 29.0 41.0 15 35.980198228216906 36.0 34.0 40.0 31.0 41.0 16 36.15851508999764 36.0 34.0 40.0 32.0 41.0 17 35.98994557360688 36.0 34.0 40.0 31.0 41.0 18 36.070894850140135 36.0 35.0 40.0 31.0 41.0 19 35.951551780605485 36.0 35.0 40.0 31.0 41.0 20 35.69673893595194 36.0 34.0 40.0 30.0 41.0 21 35.570734189816925 35.0 34.0 40.0 30.0 41.0 22 35.405804450074264 35.0 34.0 40.0 30.0 41.0 23 35.33717741790691 35.0 34.0 40.0 30.0 41.0 24 35.45475600990336 35.0 34.0 40.0 30.0 41.0 25 35.36503139841346 35.0 34.0 40.0 30.0 41.0 26 35.09865596340783 35.0 34.0 39.0 29.0 41.0 27 35.0914141761221 35.0 34.0 40.0 29.0 41.0 28 35.162204395839794 36.0 34.0 40.0 29.0 41.0 29 35.150899357296794 36.0 34.0 40.0 29.0 41.0 30 35.1372707804377 36.0 34.0 40.0 29.0 41.0 31 34.933717556056216 35.0 34.0 40.0 29.0 41.0 32 34.81125662375581 35.0 34.0 40.0 29.0 41.0 33 34.56535470022765 35.0 33.0 40.0 27.0 41.0 34 34.3682600827509 35.0 34.0 40.0 26.0 41.0 35 34.159405377260775 35.0 33.0 40.0 25.0 41.0 36 33.91435102206587 35.0 33.0 40.0 23.0 41.0 37 33.958154641287905 35.0 33.0 40.0 24.0 41.0 38 33.99311977583087 35.0 33.0 40.0 24.0 41.0 39 34.00778289373078 35.0 33.0 40.0 24.0 41.0 40 33.72520707846477 35.0 33.0 40.0 23.0 41.0 41 33.776402929899476 35.0 33.0 40.0 23.0 41.0 42 33.76211809121916 35.0 33.0 40.0 23.0 41.0 43 33.724501287449485 35.0 33.0 40.0 23.0 41.0 44 33.70365816436139 35.0 33.0 39.0 23.0 41.0 45 33.77052567190995 35.0 33.0 39.0 23.0 41.0 46 33.77180228688671 35.0 33.0 39.0 23.0 41.0 47 33.68826449084917 35.0 33.0 39.0 23.0 41.0 48 33.745719594182546 35.0 33.0 39.0 23.0 41.0 49 33.791373747917454 35.0 33.0 39.0 24.0 41.0 50 33.589731112196624 35.0 33.0 39.0 24.0 41.0 51 33.301373382639646 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 1.0 13 0.0 14 10.0 15 42.0 16 108.0 17 334.0 18 838.0 19 1875.0 20 3277.0 21 5486.0 22 8326.0 23 12018.0 24 16906.0 25 23500.0 26 30156.0 27 34491.0 28 38217.0 29 44054.0 30 52437.0 31 64583.0 32 81317.0 33 108242.0 34 190288.0 35 273949.0 36 96643.0 37 119820.0 38 172181.0 39 236036.0 40 71.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.31228899789439 24.134833324975283 30.526018614309358 13.026859062820972 2 29.66718238939976 26.358384580571308 32.17558842230324 11.798844607725687 3 26.611602585176286 27.218520946824835 34.05584045160719 12.114036016391687 4 25.110125067406138 28.758445501479997 32.793093649181 13.338335781932864 5 21.87190636010572 34.17724888853393 31.59386803813005 12.3569767132303 6 19.613994226134203 42.21688957899566 28.86796693183359 9.301149263036548 7 87.82646703925003 4.079162510857728 6.866417906289526 1.2279525436027163 8 89.95869884330759 2.7626765328821223 6.341779918264448 0.9368447055458458 9 86.06192758955652 4.739015198652311 7.513145357659597 1.6859118541315707 10 56.01504201623443 24.72330206183844 12.87845721513439 6.383198706792744 11 50.202791093907976 17.59270781675932 22.655024829604095 9.549476259728618 12 47.500416354787525 21.147665720039946 22.40094006410316 8.950977861069372 13 18.489867255568786 49.97836193334733 20.844485140932225 10.687285670151665 14 10.731366652860403 50.937742422188094 25.697046016955085 12.633844907996428 15 8.980200085561684 25.150491360560768 54.73526955335192 11.134039000525627 16 10.474062489745908 18.162726928837074 53.49611102959432 17.867099551822704 17 10.873948820245554 19.189714767562588 31.365228896074747 38.57110751611711 18 15.702673771629556 22.53547373745441 44.47189187281646 17.289960618099578 19 30.634859018244697 21.53269329232316 28.802836041651574 19.029611647780566 20 31.733911834319894 21.041116041329637 31.320962178888305 15.904009945462166 21 16.663230578829115 33.750554881752144 31.813034721822376 17.77317981759636 22 19.579571436266143 24.103506109735644 24.143562845427432 32.17335960857078 23 12.706776646242066 33.945080791402226 27.202238224279334 26.14590433807637 24 10.424533295691147 21.871225333687466 54.986073009746725 12.71816836087466 25 10.440939841221786 26.688434747453737 47.264471656609146 15.606153754715335 26 11.33258915719266 40.80889841500388 29.133691057937394 18.724821369866067 27 10.278545996214731 48.75313349541762 27.081510813770848 13.8868096945968 28 9.157081219829756 35.11570329288656 42.58006239440221 13.147153092881478 29 9.335014849471493 25.175008311617873 41.755339401897835 23.734637437012797 30 13.55038264397982 42.35210427876516 30.94633573735659 13.151177339898428 31 29.611647780565857 31.744808257011943 26.817396386473824 11.826147575948376 32 32.73749712885453 23.740642851791936 30.37018738751456 13.151672631838975 33 32.945457832391966 28.508570717473713 22.729070974715963 15.816900475418352 34 18.290636072483498 26.515454037217474 26.219083722292286 28.97482616800674 35 17.82208989672544 24.862479097132322 35.757973116791696 21.55745788935054 36 34.794073088993436 27.915520530160492 24.116383700189882 13.174022680656188 37 15.623303238156797 44.07739184217027 28.818190091808553 11.481114827864381 38 15.172401837780743 41.591397769576574 25.837708928070608 17.39849146457208 39 18.004481153832106 40.04868719775583 28.610972326181937 13.335859322230126 40 26.605535258904577 25.43807024354124 26.635190863844866 21.32120363370932 41 13.448785884674985 24.934853631944843 29.738690163316328 31.877670320063846 42 15.349840175481935 22.325841423617625 28.111965696080198 34.21235270482024 43 16.228488078013434 22.233655211183198 30.949307488999878 30.588549221803497 44 12.274572516621687 29.992836840309828 35.81654138876145 21.916049254307026 45 11.033123267639048 51.759617486034315 22.318102487046566 14.889156759280068 46 17.597536913179656 43.06557231912403 24.38439855151872 14.952492216177596 47 16.57333509161972 30.850187189397783 26.32662398488369 26.249853734098807 48 16.713688445272407 28.300238544980864 39.476439271945615 15.509633737801115 49 21.080429839110604 27.603486607615483 38.25529699252543 13.060786560748486 50 18.49599649333306 42.4849044303245 25.945434925139722 13.073664151202724 51 15.294924681573715 38.21753098205867 26.277899640232317 20.2096446961353 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1707.0 1 2204.5 2 2702.0 3 7457.0 4 12212.0 5 9768.5 6 7325.0 7 7656.0 8 7987.0 9 8389.0 10 8791.0 11 8954.0 12 9117.0 13 8955.5 14 8794.0 15 8100.0 16 7406.0 17 6956.0 18 6506.0 19 6428.0 20 6350.0 21 6655.5 22 6961.0 23 9684.0 24 12407.0 25 13011.5 26 19089.5 27 24563.0 28 30421.0 29 36279.0 30 44047.0 31 51815.0 32 57258.0 33 62701.0 34 68734.0 35 74767.0 36 78867.5 37 82968.0 38 94763.5 39 106559.0 40 146244.5 41 185930.0 42 213400.0 43 240870.0 44 227818.5 45 214767.0 46 182620.5 47 150474.0 48 127784.0 49 105094.0 50 87540.0 51 69986.0 52 52492.0 53 34998.0 54 26833.0 55 18668.0 56 15027.5 57 11387.0 58 9986.0 59 8585.0 60 7748.5 61 6912.0 62 5907.0 63 4902.0 64 4166.0 65 3430.0 66 2916.0 67 2402.0 68 2127.0 69 1852.0 70 1609.5 71 1367.0 72 1164.5 73 962.0 74 769.5 75 421.5 76 266.0 77 198.5 78 131.0 79 95.0 80 59.0 81 43.0 82 27.0 83 20.5 84 14.0 85 10.0 86 6.0 87 4.5 88 3.0 89 5.0 90 7.0 91 3.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1615209.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.10426041615239 #Duplication Level Percentage of deduplicated Percentage of total 1 79.89266779795389 13.665049953573554 2 7.5479569480141135 2.5820444249748036 3 2.6523690968315297 1.3610043525588418 4 1.461954198460886 1.000225813078493 5 0.9517594295191211 0.8139570568011839 6 0.6774496561335466 0.6952365202404642 7 0.5426441388632112 0.6497068665090586 8 0.42742841612019766 0.5848677550866728 9 0.3606986358643382 0.5552535059617107 >10 3.422685802217809 12.610188485216417 >50 0.733139291802875 9.008267897127077 >100 1.28272114023048 50.501905284824986 >500 0.042163687239086325 4.722103962521294 >1k 0.003998280686465083 0.8656009357003447 >5k 3.634800624059166E-4 0.3845871858250615 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6186 0.3829844930284564 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1906 0.1180033048354733 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.020616527025295178 0.0 2 0.0 0.0 0.0 0.07745127720313594 0.0 3 0.0 0.0 0.0 0.10822128900965758 0.0 4 0.0 0.0 0.0 0.16728485291996267 0.0 5 0.0 0.0 0.0 0.3065237997064157 0.0 6 0.0 0.0 0.0 0.4081205590112487 0.0 7 0.0 0.0 0.0 0.4795664214352446 0.0 8 0.0 0.0 0.0 0.6514327248052729 0.0 9 0.0 0.0 0.0 0.7065339531911969 0.0 10 0.0 0.0 0.0 0.8403866001241944 0.0 11 6.191149256845399E-5 0.0 0.0 0.9538084545096022 0.0 12 6.191149256845399E-5 0.0 0.0 1.0656825215807986 0.0 13 6.191149256845399E-5 0.0 0.0 1.1082776284678948 0.0 14 6.191149256845399E-5 0.0 0.0 1.1238793245951453 0.0 15 6.191149256845399E-5 0.0 0.0 1.153844486998277 0.0 16 6.191149256845399E-5 0.0 0.0 1.2199659610613858 0.0 17 6.191149256845399E-5 0.0 0.0 1.3002032554301022 0.0 18 6.191149256845399E-5 0.0 0.0 1.4135012868303731 0.0 19 6.191149256845399E-5 0.0 0.0 1.470212214023077 0.0 20 6.191149256845399E-5 0.0 0.0 1.5248800619610217 0.0 21 6.191149256845399E-5 0.0 0.0 1.611246594094015 0.0 22 6.191149256845399E-5 0.0 0.0 1.7036185410061484 0.0 23 6.191149256845399E-5 0.0 0.0 1.8123351219563537 0.0 24 6.191149256845399E-5 0.0 0.0 1.8985159196116417 0.0 25 6.191149256845399E-5 0.0 0.0 1.9689711981545421 0.0 26 6.191149256845399E-5 0.0 0.0 2.0457414489394252 0.0 27 6.191149256845399E-5 0.0 0.0 2.1180540722593793 0.0 28 6.191149256845399E-5 0.0 0.0 2.1950100575219675 0.0 29 6.191149256845399E-5 0.0 0.0 2.285896128612458 0.0 30 6.191149256845399E-5 0.0 0.0 2.406995008076354 0.0 31 6.191149256845399E-5 0.0 0.0 2.522707587686795 0.0 32 6.191149256845399E-5 0.0 0.0 2.6263474262463866 0.0 33 6.191149256845399E-5 0.0 0.0 2.728129920028925 0.0 34 6.191149256845399E-5 0.0 0.0 2.832760342469612 0.0 35 6.191149256845399E-5 0.0 0.0 2.9916252324002652 0.0 36 6.191149256845399E-5 0.0 0.0 3.1148291026114885 0.0 37 6.191149256845399E-5 0.0 0.0 3.238156795807849 0.0 38 6.191149256845399E-5 0.0 0.0 3.3544884903439742 0.0 39 6.191149256845399E-5 0.0 0.0 3.479116324884272 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 80 0.0 45.000004 1 AATCCGG 20 7.0341356E-4 45.000004 2 TAGACGC 20 7.0341356E-4 45.000004 30 CTAAGCG 60 0.0 45.000004 1 GCGTTAG 155 0.0 45.000004 1 ATCCGGA 20 7.0341356E-4 45.000004 12 AATGCGT 20 7.0341356E-4 45.000004 16 CTACGCG 30 2.1660508E-6 45.000004 1 TGCGAAG 80 0.0 45.000004 1 ACGGACC 30 2.1660508E-6 45.000004 39 GCCTCGT 40 6.8175723E-9 45.000004 13 TTACGCG 75 0.0 45.000004 1 CGATGCG 30 2.1660508E-6 45.000004 10 GCGTCAG 20 7.0341356E-4 45.000004 19 TGTCGTT 20 7.0341356E-4 45.000004 31 TATCGCT 40 6.8175723E-9 45.000004 44 ACCTTCG 40 6.8175723E-9 45.000004 23 TCCGGCA 50 2.1827873E-11 45.0 10 GATCGCG 25 3.891511E-5 45.0 1 ATTACCG 35 1.2123382E-7 45.0 1 >>END_MODULE