##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545154_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1690026 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.881836137432206 31.0 31.0 33.0 30.0 33.0 2 31.20376254566498 31.0 31.0 33.0 30.0 34.0 3 31.367719194852622 31.0 31.0 34.0 30.0 34.0 4 35.241138893721164 37.0 35.0 37.0 33.0 37.0 5 35.140449318531196 37.0 35.0 37.0 32.0 37.0 6 35.20495069306626 37.0 35.0 37.0 32.0 37.0 7 35.54462357383851 36.0 35.0 37.0 35.0 37.0 8 35.60372029779423 37.0 35.0 37.0 35.0 37.0 9 37.464594035831404 39.0 37.0 39.0 35.0 39.0 10 36.955527311414144 39.0 37.0 39.0 33.0 39.0 11 36.55153944377187 39.0 35.0 39.0 32.0 39.0 12 35.461573372243976 37.0 35.0 39.0 31.0 39.0 13 35.15150358633536 37.0 35.0 39.0 30.0 39.0 14 35.84804020766544 37.0 35.0 40.0 30.0 41.0 15 36.19953598347008 37.0 35.0 40.0 31.0 41.0 16 36.31643300162246 37.0 35.0 40.0 32.0 41.0 17 36.14008423539046 36.0 34.0 40.0 31.0 41.0 18 36.2138789580752 36.0 35.0 40.0 31.0 41.0 19 36.14920953878816 36.0 35.0 40.0 31.0 41.0 20 35.93707789110937 36.0 34.0 40.0 31.0 41.0 21 35.80730769822476 36.0 34.0 40.0 31.0 41.0 22 35.63329380731421 35.0 34.0 40.0 30.0 41.0 23 35.57317283876106 35.0 34.0 40.0 30.0 41.0 24 35.669239408151114 35.0 34.0 40.0 30.0 41.0 25 35.57042495204216 35.0 34.0 40.0 30.0 41.0 26 35.34492546268519 35.0 34.0 40.0 30.0 41.0 27 35.335177091950065 35.0 34.0 40.0 30.0 41.0 28 35.42006454338572 36.0 34.0 40.0 30.0 41.0 29 35.39339394778542 36.0 34.0 40.0 30.0 41.0 30 35.376732073944424 36.0 34.0 40.0 30.0 41.0 31 35.17824696188106 36.0 34.0 40.0 29.0 41.0 32 35.03787752377774 35.0 34.0 40.0 29.0 41.0 33 34.823060710308596 35.0 34.0 40.0 27.0 41.0 34 34.65501477492062 35.0 34.0 40.0 27.0 41.0 35 34.446562360579065 35.0 33.0 40.0 26.0 41.0 36 34.235195198180385 35.0 33.0 40.0 24.0 41.0 37 34.26443261819641 35.0 33.0 40.0 25.0 41.0 38 34.3180826803848 35.0 33.0 40.0 25.0 41.0 39 34.33381202419371 35.0 33.0 40.0 25.0 41.0 40 33.978379030855145 35.0 33.0 40.0 23.0 41.0 41 34.07977806258602 35.0 33.0 40.0 23.0 41.0 42 34.08600518571904 35.0 33.0 40.0 24.0 41.0 43 34.06663506951964 35.0 33.0 40.0 24.0 41.0 44 34.03466278033592 35.0 33.0 40.0 24.0 41.0 45 34.11845084040127 35.0 33.0 40.0 24.0 41.0 46 34.12675662977966 35.0 33.0 40.0 24.0 41.0 47 34.05885530755148 35.0 33.0 40.0 24.0 41.0 48 34.09225124347199 35.0 33.0 40.0 24.0 41.0 49 34.149477582001694 36.0 33.0 40.0 24.0 41.0 50 33.955360450075915 35.0 33.0 40.0 24.0 41.0 51 33.684836801327315 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 3.0 13 1.0 14 11.0 15 48.0 16 118.0 17 338.0 18 784.0 19 1581.0 20 2795.0 21 4821.0 22 7661.0 23 11133.0 24 16338.0 25 22548.0 26 28731.0 27 32848.0 28 36474.0 29 42425.0 30 51804.0 31 64498.0 32 82755.0 33 109460.0 34 194738.0 35 280242.0 36 106081.0 37 132403.0 38 193953.0 39 265352.0 40 81.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.53719173551176 25.522270071584696 28.96718748705641 12.973350705847128 2 31.435966073894722 25.450377686497134 30.7637870659978 12.349869173610346 3 27.367922150310115 25.975280853667336 33.816225312509985 12.840571683512561 4 25.216949325039973 29.70143654594663 31.976194449079482 13.105419679933918 5 22.63746238223554 33.33741611075806 31.362121056125762 12.663000450880638 6 19.445736337784155 41.4501315364379 29.685460460371615 9.41867166540633 7 89.05922157410596 3.753255867069501 6.223277038341422 0.9642455204831168 8 91.05842158641346 2.530079418896514 5.56322802134405 0.8482709733459721 9 87.282621687477 4.203840650972233 6.837527943357085 1.6760097181936846 10 54.619573900046504 28.060100850519458 11.046220590689138 6.2741046587448945 11 47.69784606864037 19.1900597978966 23.750344669253607 9.361749464209426 12 44.60700604606083 23.537626048356653 22.48509786239975 9.370270043182767 13 18.021675406177184 48.845698231861526 22.755507903428704 10.37711845853259 14 11.765676977750639 49.36184413730913 27.40827655905885 11.464202325881377 15 10.613031988856976 24.998787000910045 53.90769136096131 10.480489649271668 16 11.63047195723616 20.310042567392454 51.67322869588988 16.3862567794815 17 12.606788297931512 19.20183476467226 31.322772549061373 36.86860438833485 18 16.312293420337912 24.055014538237874 43.53217051098623 16.100521530437994 19 30.268055047673826 22.067944516829918 30.275865578399387 17.388134857096873 20 31.609336187727287 22.681781227034378 29.349252615048528 16.359629970189808 21 17.15452898357777 34.35994475824632 32.35382177552298 16.13170448265293 22 19.403606808415965 24.532166960744984 24.816659625354877 31.247566605484177 23 13.564170018686102 34.369767092340595 27.90377189463357 24.162290994339735 24 11.395505157908813 22.16652288189649 53.154389340755706 13.283582619438992 25 11.069474670803881 26.872959350921228 45.67580617102932 16.38175980724557 26 11.461362132890262 41.01398440023999 30.17302692384614 17.3516265430236 27 10.704214018009191 47.74399920474596 28.056905633404455 13.49488114384039 28 10.246706263690617 34.606864036411274 42.030418466934826 13.11601123296328 29 10.638061189591166 26.40758189518978 41.11291778943046 21.841439125788597 30 14.508652529606053 42.058583714096706 30.239771459137316 13.192992297159925 31 29.924746719872946 30.849111197105845 27.372359951858726 11.853782131162479 32 32.316840095951186 24.31731819510469 30.16776073267512 13.198080976269006 33 33.24061286631093 28.80494146243904 22.924736069149233 15.029709602100796 34 18.664209899729354 27.872293088982065 25.775875637416227 27.687621373872357 35 17.815879755696066 27.722946274199334 35.6372032146251 18.8239707554795 36 34.38071366949384 27.242953658701108 24.79873090709847 13.577601764706579 37 16.07241545396343 43.46678690150329 28.06749718643382 12.39330045809946 38 16.518917460441436 41.62255491927343 25.002041388712364 16.856486231572767 39 18.853260245700362 39.852996344434935 26.93999973964897 14.353743670215724 40 26.01208502117719 25.683746877266977 27.62484127463128 20.67932682692456 41 13.386302932617605 26.178768847343175 28.582637190197076 31.852291029842146 42 16.335014964266822 22.71148491206644 27.40531802469311 33.548182098973626 43 16.832758785959506 23.70602582445477 30.120720036259797 29.340495353325924 44 12.523949335690693 31.836610797703703 35.52625817590972 20.113181690695882 45 11.727216030995972 50.029111978158916 23.48656174520392 14.757110245641192 46 16.61033617234291 41.89923705315776 25.91090314586876 15.579523628630565 47 17.226953904851168 30.814496345026644 26.125988594258313 25.832561155863875 48 17.36162638917981 28.314949000784605 38.36917301863995 15.954251591395636 49 20.979854747796782 28.11980407402016 37.6177052897411 13.282635888441954 50 17.873926199951953 43.89257916742109 25.060087832968247 13.173406799658704 51 16.708500342598278 38.965909400210414 25.3981299695981 18.92746028759321 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1436.0 1 1901.0 2 2366.0 3 6367.0 4 10368.0 5 8501.0 6 6634.0 7 7073.0 8 7512.0 9 7973.0 10 8434.0 11 8477.5 12 8521.0 13 8479.5 14 8438.0 15 7963.5 16 7489.0 17 7053.5 18 6618.0 19 6972.0 20 7326.0 21 7734.0 22 8142.0 23 9557.5 24 10973.0 25 13258.5 26 20062.0 27 24580.0 28 29924.0 29 35268.0 30 42666.5 31 50065.0 32 57315.0 33 64565.0 34 75951.5 35 87338.0 36 92442.5 37 97547.0 38 112230.0 39 126913.0 40 156133.5 41 185354.0 42 219620.5 43 253887.0 44 243051.0 45 232215.0 46 193348.5 47 154482.0 48 132621.5 49 110761.0 50 91480.5 51 72200.0 52 54865.5 53 37531.0 54 27568.0 55 17605.0 56 13787.0 57 9969.0 58 8256.0 59 6543.0 60 5679.5 61 4816.0 62 3926.5 63 3037.0 64 2635.0 65 2233.0 66 1748.0 67 1263.0 68 1004.5 69 746.0 70 584.5 71 423.0 72 401.0 73 379.0 74 322.0 75 191.0 76 117.0 77 83.5 78 50.0 79 46.0 80 42.0 81 29.5 82 17.0 83 11.5 84 6.0 85 6.0 86 6.0 87 3.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1690026.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.25629988469531 #Duplication Level Percentage of deduplicated Percentage of total 1 79.57811867236661 12.93645761397863 2 7.369628768583665 2.3960579060194775 3 2.6947468215615697 1.314198373339032 4 1.4495760670017805 0.9425897300343249 5 0.9519721399566494 0.7737772294505214 6 0.6985387634894649 0.6813393372221396 7 0.5337138650999874 0.6073348850579651 8 0.4279103112950023 0.5564990675331903 9 0.35453376659724234 0.518706650614981 >10 3.7125168113416693 12.990514939251991 >50 0.7948309563446643 9.22087042675799 >100 1.3856528515072195 51.48006268636559 >500 0.044969736341791015 4.752780260689147 >1k 0.0029248609002790905 0.5310452015113426 >5k 3.656076125348863E-4 0.29776569217367943 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5010 0.29644514344749723 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02065056987288953 0.0 2 0.0 0.0 0.0 0.07195155577488158 0.0 3 0.0 0.0 0.0 0.10242445974203947 0.0 4 0.0 0.0 0.0 0.1564472972605155 0.0 5 0.0 0.0 0.0 0.2727176978342345 0.0 6 0.0 0.0 0.0 0.37869239881516614 0.0 7 0.0 0.0 0.0 0.4410583032450388 0.0 8 0.0 0.0 0.0 0.6072687639125078 0.0 9 0.0 0.0 0.0 0.6716464717110862 0.0 10 0.0 0.0 0.0 0.7951356961372192 0.0 11 0.0 0.0 0.0 0.9177373602536293 0.0 12 0.0 0.0 0.0 1.0302800075265115 0.0 13 0.0 0.0 0.0 1.078149093564241 0.0 14 0.0 0.0 0.0 1.0959594704460167 0.0 15 0.0 0.0 0.0 1.1274382760975274 0.0 16 0.0 0.0 0.0 1.1943603234506452 0.0 17 0.0 0.0 0.0 1.2841814267946174 0.0 18 0.0 0.0 0.0 1.4089724063416775 0.0 19 0.0 0.0 0.0 1.469208166028215 0.0 20 0.0 0.0 0.0 1.5270179275348426 0.0 21 0.0 0.0 0.0 1.604472357230007 0.0 22 0.0 0.0 0.0 1.689974000399994 0.0 23 0.0 0.0 0.0 1.792102606705459 0.0 24 0.0 0.0 0.0 1.867486062344603 0.0 25 0.0 0.0 0.0 1.9303845029603095 0.0 26 0.0 0.0 0.0 1.998253281310465 0.0 27 0.0 0.0 0.0 2.067778838905437 0.0 28 0.0 0.0 0.0 2.143576489355785 0.0 29 0.0 0.0 0.0 2.224166965478638 0.0 30 0.0 0.0 0.0 2.346709458907733 0.0 31 0.0 0.0 0.0 2.4509090392692183 0.0 32 0.0 0.0 0.0 2.5465880406573627 0.0 33 0.0 0.0 0.0 2.6442196747268976 0.0 34 0.0 0.0 0.0 2.7504902291444036 0.0 35 0.0 0.0 0.0 2.891671489077683 0.0 36 0.0 0.0 0.0 3.004746672536399 0.0 37 0.0 0.0 0.0 3.1193011231779866 0.0 38 0.0 0.0 0.0 3.2346839634419826 0.0 39 0.0 0.0 0.0 3.3587648947412645 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTTCG 20 7.034229E-4 45.000004 1 AACCGTG 20 7.034229E-4 45.000004 24 AACCGGT 20 7.034229E-4 45.000004 19 CGGCGAA 20 7.034229E-4 45.000004 31 GTACCGT 20 7.034229E-4 45.000004 18 ACACGTC 40 6.8175723E-9 45.000004 22 CTCGTGA 20 7.034229E-4 45.000004 36 CACGGGT 20 7.034229E-4 45.000004 40 GCGAATA 20 7.034229E-4 45.000004 1 GCGCGAC 20 7.034229E-4 45.000004 9 CGCATTG 20 7.034229E-4 45.000004 12 CCGGACC 20 7.034229E-4 45.000004 17 CAACCGG 20 7.034229E-4 45.000004 2 CTAAGCG 65 0.0 45.000004 1 TGACGTC 20 7.034229E-4 45.000004 32 CGACAAG 20 7.034229E-4 45.000004 27 GCGTTAT 20 7.034229E-4 45.000004 23 CCGTCGC 20 7.034229E-4 45.000004 21 GCACCGC 20 7.034229E-4 45.000004 3 CGTTAGA 80 0.0 45.000004 21 >>END_MODULE