##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545152_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2130646 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.828706880448465 31.0 31.0 33.0 28.0 33.0 2 31.150231432157195 31.0 31.0 33.0 30.0 34.0 3 31.28839704014651 31.0 31.0 34.0 28.0 34.0 4 35.149398351485885 35.0 35.0 37.0 32.0 37.0 5 35.008365537963606 35.0 35.0 37.0 32.0 37.0 6 35.09289107622759 37.0 35.0 37.0 32.0 37.0 7 35.538013353696485 36.0 35.0 37.0 35.0 37.0 8 35.62227042878075 37.0 35.0 37.0 35.0 37.0 9 37.48864428910293 39.0 37.0 39.0 35.0 39.0 10 36.95522954071207 39.0 37.0 39.0 32.0 39.0 11 36.475736466780496 38.0 35.0 39.0 32.0 39.0 12 35.06338359352046 35.0 34.0 39.0 30.0 39.0 13 34.571916686300774 35.0 33.0 39.0 27.0 39.0 14 35.19253785002295 35.0 33.0 40.0 27.0 41.0 15 35.674729635988335 35.0 34.0 40.0 30.0 41.0 16 35.879084559330835 35.0 34.0 40.0 31.0 41.0 17 35.73888060240885 35.0 34.0 40.0 31.0 41.0 18 35.81905159280331 36.0 35.0 39.0 31.0 41.0 19 35.67396648715929 36.0 34.0 39.0 31.0 41.0 20 35.408402428183756 35.0 34.0 39.0 30.0 41.0 21 35.236344751779505 35.0 34.0 39.0 30.0 41.0 22 35.06956669479585 35.0 34.0 39.0 29.0 41.0 23 34.99931616983769 35.0 34.0 39.0 29.0 41.0 24 35.14249575011522 35.0 34.0 39.0 30.0 41.0 25 35.064999535352186 35.0 34.0 39.0 30.0 41.0 26 34.81948197870505 35.0 34.0 39.0 29.0 41.0 27 34.80124619481603 35.0 34.0 39.0 29.0 41.0 28 34.89111799895431 35.0 34.0 39.0 29.0 41.0 29 34.889436818692545 36.0 34.0 39.0 29.0 41.0 30 34.84915795491133 36.0 34.0 39.0 29.0 41.0 31 34.600010513243404 35.0 34.0 39.0 29.0 41.0 32 34.40919983892209 35.0 34.0 39.0 27.0 41.0 33 34.14061697719846 35.0 33.0 39.0 26.0 41.0 34 33.910675917069284 35.0 33.0 39.0 24.0 41.0 35 33.67355158951792 35.0 33.0 39.0 23.0 41.0 36 33.427272761406634 35.0 33.0 39.0 23.0 41.0 37 33.44881364618993 35.0 33.0 39.0 23.0 41.0 38 33.50724756716977 35.0 33.0 39.0 23.0 41.0 39 33.5042996349464 35.0 33.0 39.0 23.0 41.0 40 33.14357523492875 35.0 32.0 39.0 23.0 41.0 41 33.2371210421628 35.0 32.0 39.0 23.0 41.0 42 33.23679625803629 35.0 32.0 39.0 23.0 41.0 43 33.20784306731386 35.0 32.0 39.0 23.0 41.0 44 33.180065576355716 35.0 32.0 39.0 23.0 41.0 45 33.236183767739924 35.0 33.0 39.0 23.0 41.0 46 33.25536339682894 35.0 33.0 39.0 23.0 41.0 47 33.19007709398934 35.0 32.0 39.0 23.0 41.0 48 33.24194680862048 35.0 33.0 39.0 23.0 41.0 49 33.30236369626864 35.0 33.0 39.0 23.0 41.0 50 33.07545176439446 35.0 32.0 38.0 23.0 41.0 51 32.77526675008425 35.0 32.0 38.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 4.0 13 5.0 14 14.0 15 53.0 16 180.0 17 571.0 18 1442.0 19 2822.0 20 5058.0 21 8102.0 22 12503.0 23 18377.0 24 25552.0 25 34789.0 26 44168.0 27 49764.0 28 53845.0 29 61059.0 30 72659.0 31 88880.0 32 113333.0 33 148808.0 34 270079.0 35 393874.0 36 117327.0 37 141971.0 38 198408.0 39 266916.0 40 79.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.40289189288131 25.93894058421718 29.605903561642805 14.0522639612587 2 29.05147077459137 26.841342954202624 32.451847937198394 11.65533833400762 3 25.408772738408913 25.352874198717195 36.563652526041395 12.674700536832493 4 23.455890842495656 28.545520935903944 35.67706695528023 12.321521266320168 5 21.36272285494634 33.25352968066962 33.64646215279309 11.737285311590945 6 19.006066704652017 41.8450554432787 29.817904992194855 9.330972859874423 7 87.64994278730488 4.118563102458127 7.27943543882935 0.9520586714076388 8 90.39680923062771 2.193794745818874 6.5510647944332385 0.8583312291201824 9 87.3659913472252 3.559671573785603 7.641579126706173 1.4327579522830165 10 60.74932203660298 22.46023037144603 11.336233236304857 5.454214355646128 11 55.07813123343812 15.049191653611157 21.29147685725362 8.581200255697098 12 50.32445558764807 20.468956363469108 20.738545962116653 8.468042086766173 13 17.793758324939947 53.02851811140846 20.396724749207518 8.78099881444407 14 10.063755311769293 52.87828198583904 26.970834197703418 10.087128504688248 15 8.549378920759244 22.957168858646625 58.62606927664192 9.86738294395221 16 9.170927502738605 17.050134090787488 57.15430906870499 16.62462933776892 17 10.155605389163663 16.635564988271163 32.07435679132057 41.13447283124461 18 15.541765267435323 21.764056534966393 45.95033618911823 16.743842008480055 19 31.893097210892847 19.697359392409624 30.022115358440587 18.387428038256942 20 32.60626119965494 19.67788173164383 31.0810430263873 16.634814042313927 21 16.489928406689803 33.946934403931955 32.633952331828 16.929184857550243 22 18.805564134070135 24.190879198139907 22.850346796229875 34.15320987156008 23 11.094381703952697 34.47128241857165 26.638399809259727 27.79593606821593 24 9.811108931281874 20.742723099003776 56.81098596388138 12.635182005832974 25 9.56982060839764 24.36110925982073 49.872573857881605 16.19649627390003 26 9.95177049589655 40.81128446489938 31.486929316273095 17.75001572293098 27 9.534338411918263 50.87949851828976 26.666654150900715 12.919508918891264 28 8.362581113896912 34.78893255848226 43.401156269037656 13.447330058583171 29 9.268456608934567 24.63689416261547 42.86939266307026 23.225256565379702 30 13.548426158076001 42.04086460162787 31.08996050962947 13.320748730666661 31 31.30383930507461 30.107582395198452 27.33095971832017 11.257618581406765 32 35.43836000912399 21.083887234200333 31.067619867401717 12.410132889273957 33 36.475087837209934 26.750666229866432 21.676524396826128 15.097721536097502 34 19.84412239292684 25.498651582665538 24.805199925280878 29.852026099126743 35 17.753488847983192 24.201110836807242 36.34165412743366 21.703746187775913 36 37.54157189885133 25.754442549348884 24.442821566792418 12.261163985007364 37 15.792064941806384 44.49232767902317 27.768338804287524 11.947268574882923 38 15.940470636605047 42.90553193726222 23.660007340496733 17.493990085636 39 19.31118543390127 41.23852578044405 26.428651216579386 13.021637569075295 40 28.159393911517917 23.785696920089023 25.38385071945316 22.6710584489399 41 13.615776623615561 24.53377989586257 28.26635677630165 33.584086704220226 42 16.10530327421824 20.458536988312463 27.16739430200981 36.268765435459486 43 16.689633097192118 20.72629615618925 30.169253831936416 32.41481691468221 44 11.531666921675399 30.077826161642996 36.16949976673741 22.221007149944192 45 11.551989396643084 52.080354972153984 22.44539918879063 13.922256442412301 46 18.0443865381673 42.29599849059863 24.66388128295362 14.995733688280454 47 16.596234193760953 30.289639855705737 25.839674915495113 27.2744510350382 48 17.92315570019609 26.974166520388653 39.55626603386954 15.546411745545718 49 22.486842018805564 25.36174474783704 38.871872662094034 13.279540571263363 50 18.471580919589645 43.03338048648156 25.056719886832447 13.438318707096345 51 15.198066689633096 39.946476326898036 25.415859790880326 19.43959719258854 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2647.0 1 3108.0 2 3569.0 3 9891.5 4 16214.0 5 13191.5 6 10169.0 7 10814.5 8 11460.0 9 12354.0 10 13248.0 11 13477.5 12 13707.0 13 13329.5 14 12952.0 15 12188.0 16 11424.0 17 10775.5 18 10127.0 19 9503.0 20 8879.0 21 9770.0 22 10661.0 23 10914.5 24 11168.0 25 14939.5 26 22602.0 27 26493.0 28 26992.0 29 27491.0 30 37666.0 31 47841.0 32 58314.0 33 68787.0 34 78725.5 35 88664.0 36 97693.0 37 106722.0 38 120615.0 39 134508.0 40 190995.0 41 247482.0 42 289162.5 43 330843.0 44 322214.0 45 313585.0 46 261273.0 47 208961.0 48 180383.5 49 151806.0 50 123539.5 51 95273.0 52 72834.0 53 50395.0 54 38054.0 55 25713.0 56 20462.5 57 15212.0 58 12991.5 59 10771.0 60 9518.0 61 8265.0 62 6980.5 63 5696.0 64 4800.0 65 3904.0 66 3243.0 67 2582.0 68 2094.5 69 1607.0 70 1475.5 71 1344.0 72 1038.0 73 732.0 74 627.5 75 403.0 76 283.0 77 188.5 78 94.0 79 88.0 80 82.0 81 58.0 82 34.0 83 21.0 84 8.0 85 7.5 86 7.0 87 4.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2130646.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.556166956098725 #Duplication Level Percentage of deduplicated Percentage of total 1 80.66891177145587 14.162368832264768 2 7.835627480497701 2.751271685068257 3 2.7642036672754333 1.4558646325004363 4 1.4508567549670002 1.018859336783371 5 0.9081238604116687 0.7971587055102074 6 0.6549207035609984 0.6898738328833517 7 0.49467691702728384 0.6079241381261433 8 0.37655352101922873 0.5288669186336328 9 0.31530549090869475 0.4982000256510941 >10 2.9961736546945033 11.391977478168116 >50 0.5304297359701544 6.6049513550079375 >100 0.790541946624714 34.323829186758395 >500 0.1981052484209434 21.187050847631294 >1k 0.01530081186991026 3.5919217781828174 >5k 2.684352959633379E-4 0.38988124683022973 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8273 0.3882859940130834 No Hit AATTTAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 2521 0.11832092238691927 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2287 0.10733833776235002 No Hit GAAATTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 2258 0.10597724821486065 No Hit AGTATAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 2131 0.10001661467930383 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0191960560318326 0.0 2 0.0 0.0 0.0 0.07241935075089902 0.0 3 0.0 0.0 0.0 0.10649352356046007 0.0 4 0.0 0.0 0.0 0.17877207194437744 0.0 5 0.0 0.0 0.0 0.3344994898260903 0.0 6 0.0 0.0 0.0 0.4910247877873659 0.0 7 0.0 0.0 0.0 0.6049808367978537 0.0 8 0.0 0.0 0.0 0.9258224970267234 0.0 9 0.0 0.0 0.0 1.0621191882649674 0.0 10 0.0 0.0 0.0 1.29768154822528 0.0 11 0.0 0.0 0.0 1.473168231606752 0.0 12 0.0 0.0 0.0 1.6457919335262639 0.0 13 0.0 0.0 0.0 1.7078857773651748 0.0 14 0.0 0.0 0.0 1.7293816053910411 0.0 15 0.0 0.0 0.0 1.7646760653811098 0.0 16 0.0 0.0 0.0 1.8404277388172414 0.0 17 0.0 0.0 0.0 1.9377691085238937 0.0 18 0.0 0.0 0.0 2.1058402005776653 0.0 19 0.0 0.0 0.0 2.17394161207446 0.0 20 0.0 0.0 0.0 2.249740219632919 0.0 21 0.0 0.0 0.0 2.3543563783002903 0.0 22 0.0 0.0 0.0 2.4596296146802423 0.0 23 0.0 0.0 0.0 2.593016390334199 0.0 24 0.0 0.0 0.0 2.6933146097474663 0.0 25 0.0 0.0 0.0 2.7752146532084634 0.0 26 0.0 0.0 0.0 2.862512120737091 0.0 27 0.0 0.0 0.0 2.9478852892503027 0.0 28 0.0 0.0 0.0 3.039641498400016 0.0 29 0.0 0.0 0.0 3.1474961115079654 0.0 30 0.0 0.0 0.0 3.3027072540440785 0.0 31 0.0 0.0 0.0 3.442477070334537 0.0 32 0.0 0.0 0.0 3.559859310274912 0.0 33 0.0 0.0 0.0 3.679869861065611 0.0 34 0.0 0.0 0.0 3.80748373967332 0.0 35 0.0 0.0 0.0 3.997191462119939 0.0 36 0.0 0.0 0.0 4.1387917091811595 0.0 37 0.0 0.0 0.0 4.28780754757008 0.0 38 0.0 0.0 0.0 4.4313320936467155 0.0 39 0.0 0.0 0.0 4.5833047817422505 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGACG 30 2.1663782E-6 45.000004 1 CTATGCG 35 1.2125747E-7 45.000004 1 GGTACGT 25 3.8919305E-5 45.000004 8 CGTGCAA 25 3.8919305E-5 45.000004 11 CGCATCG 35 1.2125747E-7 45.000004 29 ATTCGCA 25 3.8919305E-5 45.000004 33 TACGGGT 45 3.8562575E-10 45.000004 4 AATATCG 30 2.1663782E-6 45.000004 30 ACGGCAA 25 3.8919305E-5 45.000004 36 ATCCCGC 25 3.8919305E-5 45.000004 23 CCATACG 25 3.8919305E-5 45.000004 43 GTCGTTC 35 1.2125747E-7 45.000004 17 CTACCGT 30 2.1663782E-6 45.000004 21 GTTCACG 45 3.8562575E-10 45.000004 1 ACCGTTG 25 3.8919305E-5 45.000004 10 TAAATCG 25 3.8919305E-5 45.000004 31 TCGACTG 60 0.0 45.000004 1 TCGACTA 25 3.8919305E-5 45.000004 35 TAGTCCG 25 3.8919305E-5 45.000004 1 ATCGACT 25 3.8919305E-5 45.000004 34 >>END_MODULE