SRR1545150_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545150_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2167284
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7116	0.32833721838023994	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	5140	0.23716319596324248	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2185	0.10081742863417992	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGGA	30	2.1663946E-6	45.000004	4
CCGTACC	75	0.0	45.000004	31
TCTACGG	30	2.1663946E-6	45.000004	2
CGCTATA	30	2.1663946E-6	45.000004	18
TATCGTG	65	0.0	45.000004	1
CCGCAAC	30	2.1663946E-6	45.000004	13
TGCACCG	45	3.8562575E-10	45.000004	16
ACGACGA	45	3.8562575E-10	45.000004	1
TACGTAA	65	0.0	45.000004	1
CGGAATA	35	1.2125929E-7	45.0	34
TCGTTAG	25	3.8919534E-5	45.0	1
GTCGAAA	25	3.8919534E-5	45.0	42
CAACGAA	25	3.8919534E-5	45.0	8
CGTGCCG	20	7.034673E-4	45.0	40
CGCATTG	25	3.8919534E-5	45.0	37
TCGGGTG	85	0.0	45.0	5
TTATCCG	25	3.8919534E-5	45.0	1
CCGTAGA	20	7.034673E-4	45.0	28
GTATGCG	35	1.2125929E-7	45.0	1
CACTAGC	35	1.2125929E-7	45.0	31