SRR1545149_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545149_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1097067
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6913	0.6301347137412756	No Hit
TTTGATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA	1166	0.10628339016668992	No Hit
GGCCTGGGCAGTGTAGTCTTAGCAACTGGTGTATATTTTTATATGGTGTTT	1117	0.10181693551989075	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTGACG	20	7.033145E-4	45.000004	21
CAGCGAA	20	7.033145E-4	45.000004	33
CTCACGA	40	6.8139343E-9	45.000004	24
AGTCCGT	20	7.033145E-4	45.000004	32
CGTATTC	75	0.0	45.000004	29
CGTGCCT	20	7.033145E-4	45.000004	33
GCGCGAT	20	7.033145E-4	45.000004	3
CGGTTTA	20	7.033145E-4	45.000004	17
GACCGTT	40	6.8139343E-9	45.000004	9
GGCGTAA	30	2.1654105E-6	45.000004	34
GCACGAG	30	2.1654105E-6	45.000004	1
CGCGATA	20	7.033145E-4	45.000004	4
TAAGTCG	40	6.8139343E-9	45.000004	1
TACGGGC	40	6.8139343E-9	45.000004	4
ACTTACG	20	7.033145E-4	45.000004	43
ATCGTAG	60	0.0	45.000004	1
CCGTACG	20	7.033145E-4	45.000004	35
CACTCGA	20	7.033145E-4	45.000004	10
TGCGCGA	20	7.033145E-4	45.000004	2
CGTAGTA	20	7.033145E-4	45.000004	18