##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545149_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1097067 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.104163191491494 31.0 31.0 33.0 30.0 33.0 2 31.43460791364611 31.0 31.0 33.0 30.0 34.0 3 31.563681160767757 31.0 31.0 34.0 30.0 34.0 4 35.44511957792915 37.0 35.0 37.0 33.0 37.0 5 35.38836734675275 37.0 35.0 37.0 33.0 37.0 6 35.48023958427334 37.0 35.0 37.0 33.0 37.0 7 35.69493020936734 37.0 35.0 37.0 35.0 37.0 8 35.74825238567927 37.0 35.0 37.0 35.0 37.0 9 37.65167943252327 39.0 37.0 39.0 35.0 39.0 10 37.241466564940886 39.0 37.0 39.0 34.0 39.0 11 36.8905618344185 39.0 35.0 39.0 33.0 39.0 12 35.6076930579445 37.0 35.0 39.0 32.0 39.0 13 35.1842321389669 35.0 35.0 39.0 31.0 39.0 14 35.863215282202454 36.0 35.0 40.0 31.0 41.0 15 36.23241880395637 37.0 35.0 40.0 32.0 41.0 16 36.40715197886729 36.0 35.0 40.0 32.0 41.0 17 36.2897297977243 36.0 35.0 40.0 32.0 41.0 18 36.39065891144296 36.0 35.0 40.0 32.0 41.0 19 36.266980047709026 36.0 35.0 40.0 32.0 41.0 20 35.977103495046336 36.0 35.0 40.0 31.0 41.0 21 35.86571193919788 35.0 34.0 40.0 31.0 41.0 22 35.702716424794474 35.0 34.0 40.0 31.0 41.0 23 35.654878872484545 35.0 34.0 40.0 31.0 41.0 24 35.678219288338816 35.0 34.0 40.0 31.0 41.0 25 35.58484577514409 35.0 34.0 40.0 31.0 41.0 26 35.38994883630626 35.0 34.0 40.0 31.0 41.0 27 35.38865265293733 35.0 34.0 40.0 31.0 41.0 28 35.44807290712418 36.0 34.0 40.0 31.0 41.0 29 35.46240019980548 36.0 34.0 40.0 31.0 41.0 30 35.428005764461055 36.0 34.0 40.0 30.0 41.0 31 35.175799654898015 35.0 34.0 40.0 30.0 41.0 32 35.03277283885123 35.0 34.0 40.0 29.0 41.0 33 34.77167666149834 35.0 34.0 40.0 29.0 41.0 34 34.52462338216353 35.0 34.0 40.0 27.0 41.0 35 34.27348648715165 35.0 34.0 40.0 26.0 41.0 36 34.01853852134828 35.0 33.0 40.0 24.0 41.0 37 34.0028931687855 35.0 33.0 40.0 24.0 41.0 38 34.021963107084616 35.0 33.0 40.0 25.0 41.0 39 34.04738270315304 35.0 33.0 40.0 24.0 41.0 40 33.72004991490948 35.0 33.0 40.0 23.0 41.0 41 33.81268783036952 35.0 33.0 40.0 23.0 41.0 42 33.81308525368095 35.0 33.0 40.0 23.0 41.0 43 33.774625433086584 35.0 33.0 40.0 23.0 41.0 44 33.704596893352914 35.0 33.0 39.0 23.0 41.0 45 33.74610848744881 35.0 33.0 39.0 23.0 41.0 46 33.76269270700878 35.0 33.0 39.0 23.0 41.0 47 33.73899497478276 35.0 33.0 39.0 23.0 41.0 48 33.78485908335589 35.0 33.0 39.0 23.0 41.0 49 33.791366434319876 35.0 33.0 39.0 24.0 41.0 50 33.572039811606764 35.0 33.0 39.0 24.0 41.0 51 33.27861744086733 35.0 33.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 1.0 14 1.0 15 21.0 16 53.0 17 152.0 18 397.0 19 839.0 20 1542.0 21 2683.0 22 4343.0 23 6873.0 24 10307.0 25 14702.0 26 19471.0 27 22563.0 28 22784.0 29 25525.0 30 30661.0 31 38948.0 32 51707.0 33 71293.0 34 139381.0 35 210701.0 36 63903.0 37 78215.0 38 116551.0 39 163368.0 40 78.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.627026425915645 23.468119996317455 31.02773121422848 14.877122363538417 2 31.99139159230931 25.54046380029661 31.296630014392925 11.171514593001158 3 27.44973643359977 25.066837303464602 34.99640404824865 12.487022214686979 4 24.200253949849916 28.08634294897212 33.91269630751814 13.800706793659822 5 21.252302730826834 32.323185366071534 33.75864919827139 12.665862704830245 6 18.08877671099395 41.560907401279955 30.8989332465565 9.451382641169591 7 86.25544292189994 4.283238854144733 8.26740755122522 1.1939106727301068 8 88.4847507034666 2.651251017485714 7.91875063236794 0.9452476466797378 9 84.73256419161272 4.209496776404722 9.323040434175853 1.7348985978066973 10 57.57150657161322 21.10153709846345 14.582245204714022 6.744711125209308 11 53.61477466736307 15.145838859431557 21.74780574021459 9.491580732990784 12 50.63984241618789 19.743279125158264 20.92014434852201 8.696734110131834 13 17.61177758514293 51.37288789107684 19.900151950610127 11.115182573170099 14 9.852634342296323 50.98622053165395 26.424912972498486 12.736232153551242 15 9.147754877322898 22.768709659482965 56.880117622715844 11.203417840478295 16 9.399790532392279 16.64930218482554 54.97139190222657 18.979515380555608 17 9.395688686288075 17.346433718268802 33.15431053891877 40.103567056524355 18 14.816232736924908 22.67974517508958 44.84457193589817 17.659450152087338 19 29.805289923040252 18.7695008600204 29.65261009582824 21.772599121111107 20 29.906742250017547 19.407201201020538 32.79963757910866 17.886418969853253 21 15.087501492616221 33.21994007658603 32.66281822349957 19.029740207298186 22 19.828962132668288 24.04802988331615 22.74473664780729 33.37827133620827 23 12.628672633485467 32.57540332541221 26.278431490510606 28.517492550591715 24 10.912369071351158 19.741729538852233 56.64467165633458 12.701229733462041 25 10.083066941216899 25.064011587259483 47.19666164418399 17.656259827339625 26 9.832033959639658 38.184085384028506 31.624321942050944 20.359558714280894 27 8.952780459169768 48.372250737648656 28.15169903023243 14.523269772949146 28 8.443695781570314 33.92308765098212 42.97403896024582 14.659177607201748 29 8.78843315859469 23.210888669516084 42.41017184912133 25.590506322767894 30 13.949102470496333 41.54149199638673 31.059178701027374 13.450226832089562 31 29.656803094068092 30.939587099055938 28.5580552509555 10.845554555920469 32 33.144374956133035 20.592178964457048 32.661633245736134 13.601812833673787 33 33.493031874990315 28.436731758406737 22.092269660832017 15.977966705770932 34 19.416863327399327 26.05866369146096 25.980728615481098 28.543744365658615 35 20.12657385556215 23.984679149040122 35.63866199603123 20.250084999366493 36 36.895376490223484 26.469850975373426 24.464686295367557 12.170086239035538 37 15.4099065964066 42.37763053669466 31.544654975493746 10.667807891404992 38 16.696245534684756 39.84597112118038 26.15738145436878 17.300401889766075 39 20.102418539615176 38.311424917530104 28.352051424388847 13.234105118465871 40 26.65862704830243 24.242001627977142 26.287182095532906 22.81218922818752 41 13.127639424027885 23.596279899039896 31.21905954695566 32.05702112997656 42 15.277553695444308 20.620527278643873 29.42062791060163 34.68129111531019 43 16.455421592300194 21.404071036682353 30.927828473557224 31.21267889746023 44 11.189198107317056 30.82318582183221 34.70754293037709 23.280073140473647 45 11.350901995958314 51.51134798512762 21.5011480611485 15.636601957765569 46 18.287488366708686 40.87580794974236 24.89383055000287 15.942873133546081 47 17.368127926553257 29.16667806068362 28.323156197388126 25.142037815374994 48 18.193054754176362 26.626723800825292 39.596578878044824 15.583642566953523 49 23.915221221675615 26.68916301374483 37.0910801254618 12.304535639117757 50 19.38341049361616 41.40840987833924 26.15236808690809 13.055811541136503 51 16.32944934083333 36.03763489376674 25.961677819130465 21.67123794626946 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1398.0 1 2306.5 2 3215.0 3 7906.5 4 12598.0 5 9463.5 6 6329.0 7 6585.5 8 6842.0 9 7185.5 10 7529.0 11 7465.5 12 7402.0 13 7258.5 14 7115.0 15 7039.0 16 6963.0 17 6598.5 18 6234.0 19 5602.5 20 4971.0 21 4491.0 22 4011.0 23 5061.5 24 6112.0 25 6996.0 26 9360.0 27 10840.0 28 14670.0 29 18500.0 30 23393.5 31 28287.0 32 33870.0 33 39453.0 34 43603.0 35 47753.0 36 47469.5 37 47186.0 38 56006.5 39 64827.0 40 93237.0 41 121647.0 42 138088.0 43 154529.0 44 144943.5 45 135358.0 46 120363.5 47 105369.0 48 89573.0 49 73777.0 50 60748.0 51 47719.0 52 39088.0 53 30457.0 54 25943.5 55 21430.0 56 19570.0 57 17710.0 58 14842.0 59 11974.0 60 10520.5 61 9067.0 62 7876.5 63 6686.0 64 5811.0 65 4936.0 66 4288.5 67 3641.0 68 3214.0 69 2787.0 70 2321.0 71 1855.0 72 1509.0 73 1163.0 74 939.0 75 557.5 76 400.0 77 308.5 78 217.0 79 156.0 80 95.0 81 68.0 82 41.0 83 35.0 84 29.0 85 19.5 86 10.0 87 7.5 88 5.0 89 3.0 90 1.0 91 1.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1097067.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.449936065616235 #Duplication Level Percentage of deduplicated Percentage of total 1 78.59873877699826 13.71542966496691 2 6.974783663507232 2.4341905799941155 3 2.8448025002862876 1.4892486524790276 4 1.7775851721819977 1.2407499042305312 5 1.2308138551796115 1.073881154077943 6 0.947662108344937 0.9921985921455742 7 0.7677044267286681 0.9377475214594073 8 0.6416714409866784 0.89577004962795 9 0.5522139523344423 0.867248834649954 >10 3.6146607059435807 11.974118133122635 >50 0.6291215341545255 7.95173440954141 >100 1.3803974995240327 51.3581647852503 >500 0.03774729204927093 4.132076854033671 >1k 0.0015728038353862888 0.30500906040578873 >5k 5.242679451287628E-4 0.6324318040147623 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6913 0.6301347137412756 No Hit TTTGATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1166 0.10628339016668992 No Hit GGCCTGGGCAGTGTAGTCTTAGCAACTGGTGTATATTTTTATATGGTGTTT 1117 0.10181693551989075 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019050796350633097 0.0 2 0.0 0.0 0.0 0.07283055638352079 0.0 3 0.0 0.0 0.0 0.10218154406248661 0.0 4 0.0 0.0 0.0 0.13891585472901838 0.0 5 0.0 0.0 0.0 0.21849166915056237 0.0 6 0.0 0.0 0.0 0.2979763314364574 0.0 7 0.0 0.0 0.0 0.3469250282799501 0.0 8 0.0 0.0 0.0 0.47216806266162414 0.0 9 0.0 0.0 0.0 0.5320550157829923 0.0 10 0.0 0.0 0.0 0.624209824924093 0.0 11 0.0 0.0 0.0 0.7251152390874942 0.0 12 0.0 0.0 0.0 0.8054202705942299 0.0 13 0.0 0.0 0.0 0.8379615830209094 0.0 14 0.0 0.0 0.0 0.8555539452011591 0.0 15 0.0 0.0 0.0 0.8787977397916444 0.0 16 0.0 0.0 0.0 0.9297517836194144 0.0 17 0.0 0.0 0.0 0.9938317349806347 0.0 18 0.0 0.0 0.0 1.08471041422265 0.0 19 0.0 0.0 0.0 1.1231766154665122 0.0 20 0.0 0.0 0.0 1.173766050751686 0.0 21 0.0 0.0 0.0 1.241583239674514 0.0 22 0.0 0.0 0.0 1.3043870611366488 0.0 23 0.0 0.0 0.0 1.383507114879948 0.0 24 0.0 0.0 0.0 1.4450348064429976 0.0 25 0.0 0.0 0.0 1.4953507853212247 0.0 26 0.0 0.0 0.0 1.5565138683416784 0.0 27 0.0 0.0 0.0 1.6172211906838871 0.0 28 0.0 0.0 0.0 1.677655056619149 0.0 29 0.0 0.0 0.0 1.7420996165229654 0.0 30 0.0 0.0 0.0 1.8232250172505418 0.0 31 0.0 0.0 0.0 1.8985166812965844 0.0 32 0.0 0.0 0.0 1.9605912856735277 0.0 33 0.0 0.0 0.0 2.0399847958237736 0.0 34 0.0 0.0 0.0 2.1340537998135027 0.0 35 0.0 0.0 0.0 2.246808991611269 0.0 36 0.0 0.0 0.0 2.3415160605505405 0.0 37 0.0 0.0 0.0 2.4292044150448424 0.0 38 0.0 0.0 0.0 2.5231822668989223 0.0 39 0.0 0.0 0.0 2.631926764728134 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGACG 20 7.033145E-4 45.000004 21 CAGCGAA 20 7.033145E-4 45.000004 33 CTCACGA 40 6.8139343E-9 45.000004 24 AGTCCGT 20 7.033145E-4 45.000004 32 CGTATTC 75 0.0 45.000004 29 CGTGCCT 20 7.033145E-4 45.000004 33 GCGCGAT 20 7.033145E-4 45.000004 3 CGGTTTA 20 7.033145E-4 45.000004 17 GACCGTT 40 6.8139343E-9 45.000004 9 GGCGTAA 30 2.1654105E-6 45.000004 34 GCACGAG 30 2.1654105E-6 45.000004 1 CGCGATA 20 7.033145E-4 45.000004 4 TAAGTCG 40 6.8139343E-9 45.000004 1 TACGGGC 40 6.8139343E-9 45.000004 4 ACTTACG 20 7.033145E-4 45.000004 43 ATCGTAG 60 0.0 45.000004 1 CCGTACG 20 7.033145E-4 45.000004 35 CACTCGA 20 7.033145E-4 45.000004 10 TGCGCGA 20 7.033145E-4 45.000004 2 CGTAGTA 20 7.033145E-4 45.000004 18 >>END_MODULE