SRR1545148_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545148_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1228098
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4349	0.3541248336859111	No Hit
GTATTTGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGC	1331	0.10837897301355429	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCGGGC	145	0.0	45.000004	4
ACGGGTA	95	0.0	45.000004	5
TACGTGG	125	0.0	45.000004	2
TCACGAC	50	2.1827873E-11	45.0	25
TATCACG	20	7.033475E-4	45.0	1
CGGGTAT	140	0.0	45.0	6
ATCTCGC	50	2.1827873E-11	45.0	11
TCGTTAG	80	0.0	45.0	1
ATCTCCG	25	3.890963E-5	45.0	13
ACCGGGC	20	7.033475E-4	45.0	4
TCCGCAA	20	7.033475E-4	45.0	32
GATCGCG	35	1.2120108E-7	45.0	10
CACGGGT	35	1.2120108E-7	45.0	4
TAGACCG	20	7.033475E-4	45.0	2
ACGCACG	20	7.033475E-4	45.0	1
GACACGG	40	6.8157533E-9	45.0	2
GACACGC	20	7.033475E-4	45.0	13
ATGTGCG	20	7.033475E-4	45.0	1
GATCCTA	20	7.033475E-4	45.0	23
GATCCGG	40	6.8157533E-9	45.0	2