##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545148_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1228098 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.852462099930136 31.0 31.0 33.0 30.0 33.0 2 31.152644984357927 31.0 31.0 33.0 30.0 34.0 3 31.313308872744685 31.0 31.0 34.0 28.0 34.0 4 35.149745378626136 35.0 35.0 37.0 32.0 37.0 5 35.04137454828523 37.0 35.0 37.0 32.0 37.0 6 35.120427685738434 37.0 35.0 37.0 32.0 37.0 7 35.53314230623289 36.0 35.0 37.0 35.0 37.0 8 35.60682942240766 37.0 35.0 37.0 35.0 37.0 9 37.458980472242445 39.0 37.0 39.0 35.0 39.0 10 36.94098597994623 39.0 37.0 39.0 33.0 39.0 11 36.51897894141999 39.0 35.0 39.0 32.0 39.0 12 34.87453444269106 35.0 34.0 39.0 30.0 39.0 13 34.323620753392646 35.0 33.0 39.0 27.0 39.0 14 34.91805539948766 35.0 33.0 40.0 27.0 41.0 15 35.44463389729484 35.0 33.0 40.0 30.0 41.0 16 35.71365314494446 35.0 34.0 40.0 31.0 41.0 17 35.574784748448415 35.0 34.0 40.0 31.0 41.0 18 35.68984397010662 36.0 35.0 39.0 31.0 41.0 19 35.53090144271874 36.0 34.0 39.0 31.0 41.0 20 35.20489732904051 35.0 34.0 39.0 30.0 41.0 21 35.03584730208827 35.0 34.0 39.0 29.0 41.0 22 34.87007225807712 35.0 34.0 39.0 29.0 41.0 23 34.85660102043974 35.0 34.0 39.0 29.0 41.0 24 34.98789103149748 35.0 34.0 39.0 30.0 41.0 25 34.91372594043798 35.0 34.0 39.0 30.0 41.0 26 34.6510563489233 35.0 34.0 38.0 29.0 41.0 27 34.65577339919127 35.0 34.0 39.0 29.0 41.0 28 34.76894759213027 35.0 34.0 39.0 29.0 41.0 29 34.75260931945171 35.0 34.0 38.0 29.0 41.0 30 34.729746323176165 35.0 34.0 38.0 29.0 41.0 31 34.4428506519838 35.0 34.0 38.0 29.0 41.0 32 34.27492349959042 35.0 34.0 39.0 27.0 41.0 33 34.00605814845395 35.0 33.0 39.0 27.0 41.0 34 33.81466625627596 35.0 33.0 38.0 24.0 41.0 35 33.553983476888654 35.0 33.0 38.0 23.0 41.0 36 33.24631666202534 35.0 33.0 38.0 23.0 41.0 37 33.25812598017422 35.0 32.0 38.0 23.0 41.0 38 33.351147058296654 35.0 32.0 38.0 23.0 41.0 39 33.39336030186516 35.0 33.0 38.0 23.0 41.0 40 32.993526575240736 35.0 32.0 38.0 23.0 41.0 41 33.14570498445564 35.0 32.0 38.0 23.0 41.0 42 33.1503471221352 35.0 32.0 38.0 23.0 41.0 43 33.12924620022181 35.0 32.0 38.0 23.0 41.0 44 33.08649554025819 35.0 32.0 38.0 23.0 41.0 45 33.14831552530824 35.0 32.0 38.0 23.0 41.0 46 33.163803702961815 35.0 33.0 38.0 23.0 40.0 47 33.1063213196341 35.0 32.0 38.0 23.0 40.0 48 33.16198300135657 35.0 33.0 38.0 23.0 40.0 49 33.2375795742685 35.0 33.0 38.0 24.0 40.0 50 32.99557201461121 35.0 32.0 38.0 23.0 40.0 51 32.68281032946882 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 1.0 13 4.0 14 6.0 15 27.0 16 105.0 17 321.0 18 856.0 19 1683.0 20 2837.0 21 4677.0 22 7105.0 23 10344.0 24 14486.0 25 19907.0 26 25260.0 27 28996.0 28 31777.0 29 35906.0 30 42795.0 31 52409.0 32 66228.0 33 89072.0 34 169641.0 35 242254.0 36 59964.0 37 73727.0 38 104900.0 39 142744.0 40 63.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.92921086102249 23.454561443793573 31.348068313766493 13.268159381417444 2 29.697711420424106 26.539494405169624 31.613926575892155 12.148867598514125 3 28.195144035736565 26.043687067318732 33.82246367960863 11.938705217336077 4 24.137324545761004 29.975620838076438 32.5098648479193 13.37718976824325 5 22.223552192088906 32.77393172206126 33.07382635587714 11.92868972997269 6 19.105885686647156 42.08426363368395 29.794202091364042 9.015648588304842 7 87.61222638584218 4.4468763893435215 6.943256971349192 0.9976402534651143 8 90.42845114966394 2.5985711238028233 6.078505135583642 0.8944725909495821 9 87.14190561339568 3.8839734288305983 7.739773210281264 1.234347747492464 10 65.01728689404266 18.248055122636792 11.386469157998793 5.348188825321758 11 61.876413771539404 13.682947126369394 17.204164488501732 7.236474613589469 12 55.65182908855808 19.491441236774264 18.038462728544467 6.818266946123192 13 16.777732721655763 57.449568356922654 17.642484557421316 8.130214364000267 14 9.038529498460221 56.485231634608965 24.614810870142286 9.86142799678853 15 7.498912953200803 21.257749788697645 62.491836970665204 8.751500287436345 16 7.696454191766455 14.460572364746135 60.9061328981889 16.9368405452985 17 7.991056088357769 15.173219075350664 30.30344483909265 46.53227999719892 18 14.739214622937258 20.839134987598708 47.76988481375265 16.651765575711387 19 34.109248610452916 17.590127172261496 28.833610998470803 19.467013218814785 20 34.77393497913033 18.219881475256862 30.122270372559846 16.883913173052964 21 15.259368552021094 34.60554450866299 32.26705034940208 17.868036589913835 22 19.07991056088358 22.947110084048667 20.462047817030886 37.51093153803687 23 10.96500442147125 34.42347434813834 24.680277958273688 29.93124327211672 24 9.058153339554336 18.60755412027379 60.33565725210855 11.99863528806333 25 8.591333916348695 23.261905808819815 51.78397815158073 16.36278212325075 26 8.524482573866255 41.727044584389844 30.418093670049135 19.330379171694766 27 8.087953892930368 54.56649225061844 25.37126515962081 11.974288696830383 28 7.470413598914745 35.88801545153563 44.837464111170284 11.804106838379349 29 8.536208022486806 23.806569182589662 42.57257971269394 25.084643082229597 30 12.694833799908475 45.30591206890655 29.650728199215372 12.348525931969599 31 33.536411589303135 31.46882414921285 25.264759001317483 9.730005260166534 32 37.43772891088496 20.800538719222732 30.709031363946526 11.05270100594578 33 38.0437066097331 27.803888614752243 19.06378806903032 15.088616706484338 34 19.57856783416307 25.11037392781358 23.77929122920158 31.53176700882177 35 18.00605489138489 23.904769814786768 36.692348656214726 21.39682663761361 36 41.87247271797527 25.213378736876045 21.380215585401167 11.533932959747512 37 14.828295461762824 46.94462494035492 28.286260542725415 9.940819055156835 38 15.48882906738713 43.6695605725276 22.662116541188084 18.17949381889719 39 19.262387855040885 41.34132618080967 26.615221260844002 12.781064703305436 40 29.231950544663377 22.11957026230806 25.41433989795603 23.23413929507254 41 11.89245483666613 22.936768889779156 29.023335271289426 36.14744100226529 42 15.319135769295283 19.00198518359284 27.051505661600295 38.62737338551158 43 16.35553514458944 19.413027299124337 30.393584225363124 33.8378533309231 44 10.858172556261797 30.226496582520284 36.04207481813341 22.87325604308451 45 10.009787492529098 56.845789179690875 20.78303197301844 12.36139135476159 46 18.777735978724824 44.25501873628978 22.886121465876503 14.081123819108898 47 17.158565521644036 30.170637848119615 24.629549107644504 28.041247522591846 48 17.658362769094975 26.85714006536938 41.1089343032885 14.375562862247149 49 23.408392489850158 26.049956925261665 39.08548014897834 11.456170435909838 50 19.525314755011408 46.01986160713559 23.014368560163764 11.44045507768924 51 15.94188737380893 40.38863348039 23.849399640745283 19.820079505055784 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1493.0 1 2190.5 2 2888.0 3 6222.0 4 9556.0 5 7792.0 6 6028.0 7 6213.0 8 6398.0 9 6777.0 10 7156.0 11 7165.5 12 7175.0 13 6930.5 14 6686.0 15 6430.5 16 6175.0 17 5704.5 18 5234.0 19 5016.0 20 4798.0 21 5117.5 22 5437.0 23 6154.5 24 6872.0 25 7332.0 26 9109.5 27 10427.0 28 14757.5 29 19088.0 30 21889.5 31 24691.0 32 30544.5 33 36398.0 34 39569.5 35 42741.0 36 46841.0 37 50941.0 38 59936.5 39 68932.0 40 112733.5 41 156535.0 42 179171.5 43 201808.0 44 191805.5 45 181803.0 46 154941.5 47 128080.0 48 104903.5 49 81727.0 50 68468.0 51 55209.0 52 42583.0 53 29957.0 54 22205.5 55 14454.0 56 12280.0 57 10106.0 58 9151.0 59 8196.0 60 7540.5 61 6885.0 62 5927.0 63 4969.0 64 4370.0 65 3771.0 66 3298.5 67 2826.0 68 2329.0 69 1832.0 70 1538.0 71 1244.0 72 998.0 73 752.0 74 633.0 75 396.5 76 279.0 77 218.5 78 158.0 79 101.0 80 44.0 81 32.5 82 21.0 83 17.0 84 13.0 85 8.5 86 4.0 87 3.0 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1228098.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.980993379588664 #Duplication Level Percentage of deduplicated Percentage of total 1 80.59151411423213 13.685239676248024 2 7.406291205734071 2.51532363863752 3 2.6762592868425608 1.3633662369580861 4 1.460094235612014 0.9917540219401272 5 0.993313005087119 0.8433720781621846 6 0.6769582381906181 0.6897254016583735 7 0.5442516613837322 0.6469353701151103 8 0.4465967490061072 0.6066925150574821 9 0.3915891998015322 0.5984616248413417 >10 3.036926664815327 10.370655989331128 >50 0.43960247882908277 5.384029173803537 >100 1.2817730919903205 55.20455288482119 >500 0.05002041334596373 5.90175255799478 >1k 0.004809655129419589 1.1981388304311236 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4349 0.3541248336859111 No Hit GTATTTGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGC 1331 0.10837897301355429 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.142672653159601E-5 0.0 0.0 0.02410231105335242 0.0 2 8.142672653159601E-5 0.0 0.0 0.07996104545402728 0.0 3 8.142672653159601E-5 0.0 0.0 0.10528475740535365 0.0 4 8.142672653159601E-5 0.0 0.0 0.15658359512025913 0.0 5 8.142672653159601E-5 0.0 0.0 0.265451128493003 0.0 6 8.142672653159601E-5 0.0 0.0 0.371468726437141 0.0 7 8.142672653159601E-5 0.0 0.0 0.4431242457849455 0.0 8 8.142672653159601E-5 0.0 0.0 0.6353727471260436 0.0 9 8.142672653159601E-5 0.0 0.0 0.7058882923024058 0.0 10 8.142672653159601E-5 0.0 0.0 0.8340539598631379 0.0 11 8.142672653159601E-5 0.0 0.0 0.9371401956521385 0.0 12 8.142672653159601E-5 0.0 0.0 1.0451120350330347 0.0 13 8.142672653159601E-5 0.0 0.0 1.086395385384554 0.0 14 8.142672653159601E-5 0.0 0.0 1.1006450625275832 0.0 15 8.142672653159601E-5 0.0 0.0 1.126701615017694 0.0 16 8.142672653159601E-5 0.0 0.0 1.188993060814365 0.0 17 8.142672653159601E-5 0.0 0.0 1.2669998648316338 0.0 18 8.142672653159601E-5 0.0 0.0 1.395409812571961 0.0 19 8.142672653159601E-5 0.0 0.0 1.4436958614051973 0.0 20 8.142672653159601E-5 0.0 0.0 1.4901905222547387 0.0 21 8.142672653159601E-5 0.0 0.0 1.562497455414796 0.0 22 8.142672653159601E-5 0.0 0.0 1.6243003408522774 0.0 23 8.142672653159601E-5 0.0 0.0 1.7130554727717169 0.0 24 8.142672653159601E-5 0.0 0.0 1.7781968539969937 0.0 25 8.142672653159601E-5 0.0 0.0 1.82851857099352 0.0 26 8.142672653159601E-5 0.0 0.0 1.8816087966921207 0.0 27 8.142672653159601E-5 0.0 0.0 1.9345361689376581 0.0 28 8.142672653159601E-5 0.0 0.0 1.9876263946362587 0.0 29 8.142672653159601E-5 0.0 0.0 2.0527677758615357 0.0 30 8.142672653159601E-5 0.0 0.0 2.147629912270845 0.0 31 8.142672653159601E-5 0.0 0.0 2.234430802753526 0.0 32 8.142672653159601E-5 0.0 0.0 2.307796283358494 0.0 33 8.142672653159601E-5 0.0 0.0 2.3861287942818894 0.0 34 8.142672653159601E-5 0.0 0.0 2.4730925382176343 0.0 35 8.142672653159601E-5 0.0 0.0 2.6060623826437306 0.0 36 8.142672653159601E-5 0.0 0.0 2.696446049093802 0.0 37 8.142672653159601E-5 0.0 0.0 2.7916338924092376 0.0 38 8.142672653159601E-5 0.0 0.0 2.882668972671562 0.0 39 8.142672653159601E-5 0.0 0.0 2.9703655571460907 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGGGC 145 0.0 45.000004 4 ACGGGTA 95 0.0 45.000004 5 TACGTGG 125 0.0 45.000004 2 TCACGAC 50 2.1827873E-11 45.0 25 TATCACG 20 7.033475E-4 45.0 1 CGGGTAT 140 0.0 45.0 6 ATCTCGC 50 2.1827873E-11 45.0 11 TCGTTAG 80 0.0 45.0 1 ATCTCCG 25 3.890963E-5 45.0 13 ACCGGGC 20 7.033475E-4 45.0 4 TCCGCAA 20 7.033475E-4 45.0 32 GATCGCG 35 1.2120108E-7 45.0 10 CACGGGT 35 1.2120108E-7 45.0 4 TAGACCG 20 7.033475E-4 45.0 2 ACGCACG 20 7.033475E-4 45.0 1 GACACGG 40 6.8157533E-9 45.0 2 GACACGC 20 7.033475E-4 45.0 13 ATGTGCG 20 7.033475E-4 45.0 1 GATCCTA 20 7.033475E-4 45.0 23 GATCCGG 40 6.8157533E-9 45.0 2 >>END_MODULE