##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545146_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1559603 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.824073177597118 31.0 31.0 33.0 28.0 33.0 2 31.14329159407875 31.0 31.0 33.0 30.0 34.0 3 31.31039629957111 31.0 31.0 34.0 28.0 34.0 4 35.15093264119138 35.0 35.0 37.0 32.0 37.0 5 35.009117063765586 35.0 35.0 37.0 32.0 37.0 6 35.08718436679078 37.0 35.0 37.0 32.0 37.0 7 35.50919112107376 36.0 35.0 37.0 35.0 37.0 8 35.58492962632157 37.0 35.0 37.0 35.0 37.0 9 37.4157622164102 39.0 37.0 39.0 35.0 39.0 10 36.954628838236395 39.0 37.0 39.0 32.0 39.0 11 36.52281830696658 39.0 35.0 39.0 32.0 39.0 12 34.968648431684215 35.0 34.0 39.0 30.0 39.0 13 34.40282623206034 35.0 33.0 39.0 27.0 39.0 14 34.980141100010705 35.0 33.0 40.0 27.0 41.0 15 35.48246573006079 35.0 33.0 40.0 30.0 41.0 16 35.728445636485695 35.0 34.0 40.0 31.0 41.0 17 35.60337855210589 35.0 34.0 40.0 31.0 41.0 18 35.73204655287275 36.0 35.0 39.0 31.0 41.0 19 35.56501366052771 36.0 34.0 39.0 30.0 41.0 20 35.28024952503939 35.0 34.0 39.0 30.0 41.0 21 35.109714459384854 35.0 34.0 39.0 29.0 41.0 22 34.921365244873215 35.0 34.0 39.0 29.0 41.0 23 34.89522718281511 35.0 34.0 39.0 29.0 41.0 24 35.010344299158184 35.0 34.0 39.0 30.0 41.0 25 34.935481657832156 35.0 34.0 39.0 30.0 41.0 26 34.679202335466144 35.0 34.0 39.0 29.0 41.0 27 34.673535508716 35.0 34.0 39.0 29.0 41.0 28 34.76717536449981 35.0 34.0 39.0 29.0 41.0 29 34.774316284336464 35.0 34.0 39.0 29.0 41.0 30 34.74870335591814 35.0 34.0 39.0 29.0 41.0 31 34.468496790529386 35.0 34.0 39.0 29.0 41.0 32 34.32288922244956 35.0 34.0 39.0 27.0 41.0 33 34.078964967366694 35.0 33.0 39.0 27.0 41.0 34 33.86697768598804 35.0 33.0 39.0 25.0 41.0 35 33.64916969254355 35.0 33.0 39.0 23.0 41.0 36 33.363397608237484 35.0 33.0 38.0 23.0 41.0 37 33.37424331704928 35.0 33.0 38.0 23.0 41.0 38 33.449736246980805 35.0 33.0 38.0 23.0 41.0 39 33.48356344531268 35.0 33.0 38.0 23.0 41.0 40 33.10605840075968 35.0 32.0 38.0 23.0 41.0 41 33.246581982722525 35.0 32.0 38.0 23.0 41.0 42 33.24626908258063 35.0 32.0 38.0 23.0 41.0 43 33.19518492847218 35.0 32.0 38.0 23.0 41.0 44 33.18358197566945 35.0 32.0 38.0 23.0 41.0 45 33.2603867779172 35.0 33.0 38.0 23.0 41.0 46 33.27274633352206 35.0 33.0 38.0 23.0 41.0 47 33.22033684213226 35.0 33.0 38.0 23.0 41.0 48 33.265356632425046 35.0 33.0 38.0 23.0 41.0 49 33.3257591835871 35.0 33.0 38.0 24.0 40.0 50 33.055133902666256 35.0 32.0 38.0 23.0 40.0 51 32.73047948740801 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 1.0 12 0.0 13 7.0 14 12.0 15 33.0 16 136.0 17 437.0 18 1013.0 19 2082.0 20 3599.0 21 5877.0 22 9043.0 23 12912.0 24 18202.0 25 24755.0 26 31447.0 27 36196.0 28 40259.0 29 45936.0 30 54269.0 31 66135.0 32 84477.0 33 112662.0 34 207329.0 35 302912.0 36 81312.0 37 96172.0 38 134801.0 39 187496.0 40 88.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.78046143794286 25.61562141134635 31.21973989534516 12.384177255365628 2 29.241992994371003 26.35350150006123 32.78064994745458 11.623855558113187 3 27.550985731625293 26.26322211485872 34.4627446856668 11.72304746784919 4 24.724689552405323 29.78879881610897 32.50763174987481 12.978879881610897 5 21.436480950600888 32.92017263367665 32.82489197571433 12.818454440008132 6 19.093769375924513 43.18701618296451 28.030787322158268 9.688427118952708 7 85.68885799783664 5.784036065588486 7.063207752229253 1.4638981843456316 8 89.0670253904359 3.2719865247758566 6.346486894421209 1.3145011903670356 9 85.32408568077902 5.14246253694049 7.724016945338012 1.8094348369424782 10 64.06495755650636 18.499259106323855 11.644758313493883 5.791025023675897 11 60.80021646534407 14.820822991492067 17.24785089538812 7.131109647775748 12 55.33267119901667 19.932636703058407 17.571651247144302 7.163040850780615 13 18.59050027474941 55.5148329414601 18.024009956379924 7.870656827410566 14 9.259343563714612 56.53066838163302 24.167175877450862 10.042812177201506 15 8.167014297869393 22.660125685831588 60.172813209515496 9.000046806783521 16 8.82288633709989 15.83249070436515 58.955067411386096 16.389555547148856 17 8.946379302937991 16.037607006398424 30.92799898435692 44.088014706306666 18 14.789917690591773 21.418207069363167 46.647255743929705 17.144619496115357 19 33.58335422540223 18.49015422514576 28.529568101625863 19.396923447826143 20 34.16920844599555 19.724570932474485 28.94435314628146 17.16186747524851 21 16.573640856038363 34.452421545739526 31.419213735803282 17.554723862418832 22 19.248103523781374 25.416019333125163 19.917568765897474 35.41830837719599 23 12.067558218341462 34.417540874184006 24.468149907380276 29.046751000094257 24 9.796275077696055 20.88396854840623 56.839272558465204 12.480483815432516 25 8.961126645691243 24.743348146932263 50.63878435730118 15.656740850075307 26 8.669321615821463 42.309356932501416 30.219485343385465 18.80183610829166 27 8.990108380145461 53.68782953097679 25.272393038484793 12.049669050392954 28 7.826286561387738 37.779999140806986 42.69407022171668 11.699644076088594 29 8.414449061716347 25.403836745633345 41.83987848189572 24.341835710754594 30 13.45329548609486 44.71612326983213 29.248981952458415 12.581599291614598 31 32.795653765733974 31.434474029608815 24.963788861652613 10.806083343004598 32 37.805390217895194 21.46078200670299 29.815023438657146 10.918804336744671 33 38.04224536628873 27.038291154864414 19.509836798210827 15.409626680636034 34 20.03727871772496 26.688971488256946 23.391145054222132 29.88260473979596 35 18.06139126431534 23.52765415301202 35.37124511814866 23.039709464523987 36 40.86713093011491 25.056697120998102 22.04375087762719 12.032421071259801 37 15.936940362387094 45.19156477642067 28.225772840908874 10.645722020283367 38 15.513563387605691 44.27639598025908 21.945520751114227 18.264519881021005 39 19.57870047698036 40.7956383772024 26.570287438534034 13.055373707283199 40 28.165629330028217 24.35421065489102 24.278550374678684 23.201609640402076 41 13.48811203876884 22.97148697456981 28.00834571362071 35.53205527304064 42 15.899943767740893 19.591652491050606 26.627737956390185 37.88066578481832 43 15.640775248572874 20.14269015896994 30.30848235095726 33.90805224149992 44 10.606160670375731 30.954993033483518 34.99865029754367 23.44019599859708 45 9.969267820079853 54.560423389798565 21.0570895285531 14.41321926156849 46 18.131537320715594 44.05133870606815 23.00386700974543 14.813256963470833 47 17.476370589181993 30.838745501258973 23.95769949147315 27.727184418085887 48 17.710532744551017 27.546882123206995 39.50492529188518 15.237659840356809 49 23.301827452242655 26.027328749688223 38.39066736855469 12.280176429514436 50 19.03240760629468 45.11494271298529 23.647428223721036 12.205221456998991 51 16.08601676195801 40.23158457633129 23.152045744974842 20.53035291673586 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2385.0 1 2923.0 2 3461.0 3 6894.0 4 10327.0 5 8454.0 6 6581.0 7 7089.0 8 7597.0 9 8161.0 10 8725.0 11 8691.0 12 8657.0 13 8507.5 14 8358.0 15 7858.0 16 7358.0 17 6675.5 18 5993.0 19 5849.0 20 5705.0 21 5841.0 22 5977.0 23 6353.0 24 6729.0 25 8048.5 26 13027.0 27 16686.0 28 21685.5 29 26685.0 30 31129.0 31 35573.0 32 40486.5 33 45400.0 34 50026.0 35 54652.0 36 57639.5 37 60627.0 38 76485.0 39 92343.0 40 137918.5 41 183494.0 42 221623.5 43 259753.0 44 247759.0 45 235765.0 46 202085.5 47 168406.0 48 139036.5 49 109667.0 50 91126.0 51 72585.0 52 55556.0 53 38527.0 54 28996.5 55 19466.0 56 15354.5 57 11243.0 58 9718.5 59 8194.0 60 7772.5 61 7351.0 62 6344.0 63 5337.0 64 4364.0 65 3391.0 66 2916.5 67 2442.0 68 1996.0 69 1550.0 70 1476.0 71 1402.0 72 1119.0 73 836.0 74 673.5 75 400.0 76 289.0 77 193.5 78 98.0 79 80.5 80 63.0 81 43.5 82 24.0 83 16.5 84 9.0 85 7.0 86 5.0 87 5.0 88 5.0 89 3.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1559603.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.270569754111655 #Duplication Level Percentage of deduplicated Percentage of total 1 80.60092104071906 13.920238290793844 2 7.887175574579428 2.724320318473993 3 2.828416948646001 1.465451166159072 4 1.427521261346647 0.9861642207825885 5 0.899837213757935 0.7770350683775947 6 0.667279186882375 0.6914575045511377 7 0.48239907976107665 0.5831914869433061 8 0.3981849514974576 0.5501504783899525 9 0.32457179558112736 0.5044985852221016 >10 2.82567760860354 9.845962704918849 >50 0.44459705608044053 5.50131904587508 >100 1.129567203437863 51.542378997875296 >500 0.0737889496142187 8.319816613046664 >1k 0.009689458030149931 2.2556476464691397 >5k 3.7267146269807423E-4 0.33236787212140145 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5164 0.33110990425127423 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2918 0.18709889632169213 No Hit TTTGTAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 2158 0.1383685463544248 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1946 0.12477534346881866 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1633 0.10470613354808884 No Hit GATAGAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1570 0.10066664401132852 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02872525892807336 0.0 2 0.0 0.0 0.0 0.10682205663877281 0.0 3 0.0 0.0 0.0 0.15439826673839432 0.0 4 0.0 0.0 0.0 0.2432029176655854 0.0 5 0.0 0.0 0.0 0.42491582793826377 0.0 6 0.0 0.0 0.0 0.600922157754249 0.0 7 0.0 0.0 0.0 0.7273004732614646 0.0 8 0.0 0.0 0.0 1.0770689720396793 0.0 9 0.0 0.0 0.0 1.2167198960248218 0.0 10 0.0 0.0 0.0 1.4593457437565842 0.0 11 0.0 0.0 0.0 1.6328514371926701 0.0 12 0.0 0.0 0.0 1.8017405711581729 0.0 13 0.0 0.0 0.0 1.8723995786107106 0.0 14 0.0 0.0 0.0 1.893174096228335 0.0 15 0.0 0.0 0.0 1.9358772713312298 0.0 16 0.0 0.0 0.0 2.030388502715114 0.0 17 0.0 0.0 0.0 2.13778762928771 0.0 18 0.0 0.0 0.0 2.3302083927768797 0.0 19 0.0 0.0 0.0 2.3986232393756617 0.0 20 0.0 0.0 0.0 2.472616428668065 0.0 21 0.0 0.0 0.0 2.5753348768885416 0.0 22 0.0 0.0 0.0 2.681900458001171 0.0 23 0.0 0.0 0.0 2.8082787735083863 0.0 24 0.0 0.0 0.0 2.9112536972550065 0.0 25 0.0 0.0 0.0 2.9896069704918493 0.0 26 0.0 0.0 0.0 3.0741797752376727 0.0 27 0.0 0.0 0.0 3.1577907967604575 0.0 28 0.0 0.0 0.0 3.247557230910687 0.0 29 0.0 0.0 0.0 3.3466850217651545 0.0 30 0.0 0.0 0.0 3.491465456273167 0.0 31 0.0 0.0 0.0 3.6247686109862576 0.0 32 0.0 0.0 0.0 3.736591940384829 0.0 33 0.0 0.0 0.0 3.84732524879729 0.0 34 0.0 0.0 0.0 3.973062375489147 0.0 35 0.0 0.0 0.0 4.145606285702195 0.0 36 0.0 0.0 0.0 4.278075894955319 0.0 37 0.0 0.0 0.0 4.414841469271346 0.0 38 0.0 0.0 0.0 4.54327158898771 0.0 39 0.0 0.0 0.0 4.676061792648514 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACGC 65 0.0 45.000004 1 TAAACGG 65 0.0 45.000004 2 AGTTCCC 65 0.0 45.000004 17 TTGTTCG 115 0.0 45.000004 1 TGATCCG 35 1.2123019E-7 45.0 1 TCACGAC 70 0.0 45.0 25 CGGGTTC 20 7.034063E-4 45.0 6 TATCACT 20 7.034063E-4 45.0 45 TGTCACG 55 1.8189894E-12 45.0 2 ACTATCC 40 6.8175723E-9 45.0 44 CTCACGA 70 0.0 45.0 24 ACACGGC 25 3.8914488E-5 45.0 3 GCGACTT 25 3.8914488E-5 45.0 41 GTCGATA 50 2.1827873E-11 45.0 9 CAACGCG 20 7.034063E-4 45.0 40 TTAGCGT 55 1.8189894E-12 45.0 30 TTAGCGA 25 3.8914488E-5 45.0 31 CGTTGGC 25 3.8914488E-5 45.0 15 TGAACCG 40 6.8175723E-9 45.0 1 AGGCGTA 20 7.034063E-4 45.0 12 >>END_MODULE