##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545141_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2437119 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.737805991418558 31.0 30.0 31.0 28.0 33.0 2 31.048130189785564 31.0 31.0 33.0 28.0 34.0 3 30.956460886809385 31.0 31.0 34.0 28.0 34.0 4 34.9945907442353 35.0 35.0 37.0 32.0 37.0 5 34.97715047972627 35.0 35.0 37.0 32.0 37.0 6 35.07709184492017 37.0 35.0 37.0 32.0 37.0 7 35.399766691737256 35.0 35.0 37.0 35.0 37.0 8 35.43170727403955 36.0 35.0 37.0 35.0 37.0 9 37.24805395222802 39.0 37.0 39.0 35.0 39.0 10 36.706929370293366 39.0 37.0 39.0 32.0 39.0 11 36.43118042245783 38.0 35.0 39.0 32.0 39.0 12 36.14787378047605 38.0 35.0 39.0 32.0 39.0 13 35.9846322645714 38.0 35.0 39.0 31.0 39.0 14 36.92459416220546 39.0 35.0 40.0 31.0 41.0 15 37.036175090342326 39.0 35.0 40.0 31.0 41.0 16 36.96302314330978 39.0 35.0 40.0 31.0 41.0 17 36.71007940112896 38.0 35.0 40.0 31.0 41.0 18 36.591683048714486 38.0 35.0 40.0 31.0 41.0 19 36.39126443969293 37.0 35.0 40.0 30.0 41.0 20 36.12398738018127 37.0 34.0 40.0 30.0 41.0 21 36.0403923649194 37.0 34.0 40.0 30.0 41.0 22 35.89135491537344 37.0 34.0 40.0 30.0 41.0 23 35.66160577304596 37.0 34.0 40.0 29.0 41.0 24 35.5829703022298 37.0 34.0 40.0 29.0 41.0 25 35.34324667773711 36.0 34.0 40.0 29.0 41.0 26 35.02857020933323 36.0 34.0 40.0 27.0 41.0 27 35.04791600246028 36.0 34.0 40.0 27.0 41.0 28 34.943181682962546 36.0 33.0 40.0 26.0 41.0 29 34.82214820039563 36.0 33.0 40.0 26.0 41.0 30 34.74796593847079 36.0 33.0 40.0 25.0 41.0 31 34.59024651648114 36.0 33.0 40.0 25.0 41.0 32 34.35453869917718 36.0 33.0 40.0 23.0 41.0 33 33.90298750286711 36.0 33.0 40.0 21.0 41.0 34 33.362439421300316 36.0 32.0 40.0 18.0 41.0 35 32.93635928323565 36.0 31.0 40.0 16.0 41.0 36 32.74510108041503 36.0 31.0 40.0 15.0 41.0 37 32.71324912735078 36.0 31.0 40.0 15.0 41.0 38 32.566322366696085 35.0 31.0 40.0 15.0 41.0 39 32.453495295059454 35.0 31.0 40.0 15.0 41.0 40 32.27132856458794 35.0 30.0 40.0 13.0 41.0 41 32.107016932697995 35.0 30.0 40.0 12.0 41.0 42 32.03797147369497 35.0 30.0 40.0 11.0 41.0 43 31.901114389572278 35.0 30.0 40.0 10.0 41.0 44 31.771335745197504 35.0 30.0 39.0 10.0 41.0 45 31.789329942444336 35.0 30.0 39.0 10.0 41.0 46 31.758235441108948 35.0 30.0 39.0 10.0 41.0 47 31.63175823585143 35.0 29.0 39.0 10.0 41.0 48 31.619653369408717 35.0 29.0 39.0 10.0 41.0 49 31.554234733716328 35.0 29.0 39.0 10.0 41.0 50 31.422365506157064 35.0 29.0 39.0 10.0 41.0 51 31.13147490951406 35.0 28.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 2.0 12 1.0 13 12.0 14 34.0 15 109.0 16 350.0 17 1082.0 18 2538.0 19 5027.0 20 8711.0 21 13621.0 22 20213.0 23 28842.0 24 41450.0 25 58917.0 26 75872.0 27 83467.0 28 80373.0 29 78693.0 30 85514.0 31 96207.0 32 113908.0 33 139154.0 34 192662.0 35 238755.0 36 203979.0 37 243398.0 38 311094.0 39 313088.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.63887360444853 20.63662053432762 24.540943630573643 23.183562230650207 2 39.493803954587364 22.695239748243726 26.321652738335715 11.489303558833196 3 26.271470535497038 23.84458863108449 37.52319849789854 12.36074233551993 4 23.31568544662776 25.60289423700689 37.19416245164886 13.887257864716496 5 20.497809093441887 28.795434281214828 37.095275199938946 13.61148142540434 6 18.62568056791646 38.25660544273792 33.75620968857081 9.36150430077481 7 79.68974842836973 3.325812157715729 15.412296239945608 1.5721431739689362 8 80.34195293705395 2.750296559174993 15.358421152188301 1.54932935158275 9 75.92809378614668 4.616106148284102 16.875335180596434 2.5804648849727894 10 36.88449353519463 26.949853495048863 23.676275142904387 12.489377826852115 11 26.49127925226466 21.689995441338727 33.074051779991045 18.744673526405563 12 25.788564284304545 21.687041133403824 36.62488372541513 15.8995108568765 13 18.67984288005633 26.953177091475634 35.561948349670246 18.805031678797793 14 15.855647590454138 28.83059875205109 36.022451099023066 19.291302558471703 15 16.13388595304538 21.798976578492884 42.777722384503996 19.28941508395774 16 16.91431563251528 20.941406636278327 40.11724499296095 22.027032738245445 17 17.23502217167073 20.953141803908633 37.61232012060142 24.199515903819222 18 18.66892835351905 21.909106613177283 38.62244724200993 20.799517791293738 19 22.56221382706384 22.620602440832805 32.05202536273362 22.765158369369733 20 24.082820740390602 22.26021790482943 34.23587440744584 19.421086947334125 21 19.754103102885004 24.201690602715747 33.73068775057763 22.31351854382162 22 20.767389692501677 23.62207179870987 31.61675732699142 23.99378118179703 23 18.82813272556654 26.480446789836687 32.6083379596975 22.08308252489928 24 19.532940328313884 21.73447418858086 41.099757541589064 17.63282794151619 25 18.625762632025765 25.10238523436894 35.37808371277726 20.893768420828035 26 18.549771266811348 25.27820758855025 34.777046176243346 21.394974968395058 27 16.76582062673181 26.04062419602818 33.75854851568594 23.435006661554073 28 16.928430659315364 23.00458040826074 37.0781648331493 22.988824099274595 29 16.875253116487134 20.34332340767931 39.25233031296379 23.529093162869767 30 19.962751100787447 25.380090180249717 35.972515088512296 18.684643630450545 31 22.733932975780007 26.868527962729765 32.12547274055965 18.272066320930573 32 23.7737262727015 22.51141614340539 30.94342131016171 22.771436273731403 33 23.094850928493848 27.58293706626554 29.221059784113944 20.101152221126668 34 21.115628740328233 24.689643796630364 30.959464843530416 23.235262619510987 35 23.142899464490654 25.995488935911627 31.35095167695956 19.510659922638165 36 24.489653562259374 30.039854434682915 27.551014127746736 17.91947787531097 37 19.92697114913141 31.330066361141988 31.083340616523035 17.659621873203566 38 21.64961989956174 28.77463102950656 30.887822876109045 18.68792619482266 39 22.40034237146401 31.054905402649602 27.8633501277533 18.68140209813308 40 23.18590105776534 26.203644549158252 29.30501136793074 21.305443025145674 41 19.14867513650339 25.71798915030411 31.401051815688934 23.73228389750357 42 19.079495092361103 26.20249565162801 29.708110272826232 25.00989898318465 43 19.186875979383856 25.636458457711747 29.91257300115423 25.26409256175016 44 19.015936439706064 26.667758119320396 30.00678259863388 24.309522842339664 45 18.11844230831568 31.508843023258198 26.805461694730543 23.56725297369558 46 19.933659374039596 29.181135594938123 30.302993001162438 20.582212029859846 47 19.124876544805566 27.543997646401348 32.021292353799716 21.309833454993377 48 20.07657402039047 24.958608914870386 32.62934637167902 22.335470693060124 49 22.153493530681104 25.92889391121238 32.219559241875345 19.698053316231174 50 19.76645375133508 30.01679441996882 31.36227652404335 18.85447530465275 51 18.436112475426928 27.79626271839824 30.429823082089957 23.337801724084873 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2152.0 1 3691.5 2 5231.0 3 39356.5 4 73482.0 5 52712.5 6 31943.0 7 31054.5 8 30166.0 9 30707.0 10 31248.0 11 31086.5 12 30925.0 13 30691.5 14 30458.0 15 30088.0 16 29718.0 17 28117.5 18 26517.0 19 23381.5 20 20246.0 21 18404.5 22 16563.0 23 16732.5 24 16902.0 25 18793.0 26 22962.0 27 25240.0 28 28384.5 29 31529.0 30 37703.5 31 43878.0 32 53102.5 33 62327.0 34 74710.5 35 87094.0 36 89570.0 37 92046.0 38 97007.0 39 101968.0 40 113394.0 41 124820.0 42 132629.5 43 140439.0 44 141472.0 45 142505.0 46 137311.5 47 132118.0 48 129109.5 49 126101.0 50 121963.5 51 117826.0 52 120033.0 53 122240.0 54 126421.5 55 130603.0 56 128898.5 57 127194.0 58 116767.0 59 106340.0 60 96508.5 61 86677.0 62 80861.5 63 75046.0 64 67334.5 65 59623.0 66 51647.0 67 43671.0 68 38229.0 69 32787.0 70 28021.5 71 23256.0 72 19739.0 73 16222.0 74 13063.0 75 7242.0 76 4580.0 77 3579.0 78 2578.0 79 1921.0 80 1264.0 81 876.0 82 488.0 83 375.0 84 262.0 85 191.0 86 120.0 87 87.5 88 55.0 89 53.5 90 52.0 91 37.5 92 23.0 93 15.0 94 7.0 95 3.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2437119.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.53474258983567 #Duplication Level Percentage of deduplicated Percentage of total 1 73.89122990074422 19.606847650626165 2 6.730539952784424 3.571862902754788 3 3.196605544367496 2.5446331584309907 4 2.1987696087758377 2.3337514233288212 5 1.6525972791895458 2.1925621703978693 6 1.3102945903048062 2.0860997802355334 7 1.1415906396462088 2.1204269636184594 8 0.9318820513272312 1.9781800284844886 9 0.8098261788916683 1.933967627946057 >10 7.2076249323167 38.13565719592133 >50 0.7448603734759696 13.693331907495429 >100 0.17964573768230319 6.831742037803945 >500 0.002188446445249646 0.3919715759002967 >1k 0.002188446445249646 0.7951838181570992 >5k 0.0 0.0 >10k+ 1.5631760323211755E-4 1.7837817588986518 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 43005 1.764583510284069 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012350648450075684 0.0 2 0.0 0.0 0.0 0.04312468943863636 0.0 3 0.0 0.0 0.0 0.07398079453649986 0.0 4 0.0 0.0 0.0 0.10249807251923275 0.0 5 0.0 0.0 0.0 0.18210025854297635 0.0 6 0.0 0.0 0.0 0.35570688177311 0.0 7 0.0 0.0 0.0 0.4932463289646505 0.0 8 0.0 0.0 0.0 0.734104489768452 0.0 9 0.0 0.0 0.0 0.9005305034345882 0.0 10 0.0 0.0 0.0 1.067613029975147 0.0 11 0.0 0.0 0.0 1.1736808912490526 0.0 12 0.0 0.0 0.0 1.2574273147925892 0.0 13 0.0 0.0 0.0 1.3016188376521622 0.0 14 0.0 0.0 0.0 1.3401889690244917 0.0 15 0.0 0.0 0.0 1.3675163174223335 0.0 16 0.0 0.0 0.0 1.404814455100469 0.0 17 0.0 0.0 0.0 1.4465440546809574 0.0 18 0.0 0.0 0.0 1.5126466947243857 0.0 19 0.0 0.0 0.0 1.5400971392861817 0.0 20 0.0 0.0 0.0 1.5702556994549712 0.0 21 0.0 0.0 0.0 1.6057073946737932 0.0 22 0.0 0.0 0.0 1.648093507128704 0.0 23 0.0 0.0 0.0 1.6993425433883205 0.0 24 0.0 0.0 0.0 1.7458318613083728 0.0 25 0.0 0.0 0.0 1.7884231340365406 0.0 26 0.0 0.0 0.0 1.8285935155402753 0.0 27 0.0 0.0 0.0 1.876806179755687 0.0 28 0.0 0.0 0.0 1.9216542154896827 0.0 29 0.0 0.0 0.0 1.973190476131859 0.0 30 0.0 0.0 0.0 2.0437656101322914 0.0 31 0.0 0.0 0.0 2.0976817299442496 0.0 32 0.0 0.0 0.0 2.1534442922155215 0.0 33 0.0 0.0 0.0 2.223937362106651 0.0 34 0.0 0.0 0.0 2.296523066785003 0.0 35 0.0 0.0 0.0 2.379202656907603 0.0 36 0.0 0.0 0.0 2.449777790908035 0.0 37 0.0 0.0 0.0 2.517111392591006 0.0 38 0.0 0.0 0.0 2.591174251236809 0.0 39 0.0 0.0 0.0 2.681485803524571 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 29445 0.0 44.029545 1 ACGGGTA 190 0.0 43.81579 5 CGGTCTA 300 0.0 40.500004 31 TAATGCG 100 0.0 40.5 1 ATGGGAC 2385 0.0 40.0 5 TTGGGAC 1760 0.0 39.886364 5 TGGGACA 2435 0.0 39.548256 6 GTTTTTT 34070 0.0 39.37995 2 CCCTAGC 5150 0.0 39.32039 21 ATACTAT 5095 0.0 38.949947 45 GATGCCA 4610 0.0 38.80152 9 GGGCGAT 3560 0.0 38.742977 7 GCCCTAG 5275 0.0 38.72986 20 ACTAATC 5300 0.0 38.67453 10 TACTCGA 35 6.2511717E-6 38.571426 44 ATCCTAG 5345 0.0 38.517307 14 GGACTAA 5615 0.0 38.50846 8 GACTAAT 5280 0.0 38.394886 9 TACACAA 5270 0.0 38.339657 30 GGATGCC 4740 0.0 38.30696 8 >>END_MODULE