##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545139_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1313772 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.967047554674632 31.0 31.0 33.0 30.0 33.0 2 31.30090076512515 31.0 31.0 33.0 30.0 34.0 3 31.43032200412248 31.0 31.0 34.0 30.0 34.0 4 35.306138355818206 37.0 35.0 37.0 33.0 37.0 5 35.20769205006653 37.0 35.0 37.0 32.0 37.0 6 35.270594897744814 37.0 35.0 37.0 32.0 37.0 7 35.59699171545748 36.0 35.0 37.0 35.0 37.0 8 35.64714196983952 37.0 35.0 37.0 35.0 37.0 9 37.48985364279342 39.0 37.0 39.0 35.0 39.0 10 37.046524815569214 39.0 37.0 39.0 33.0 39.0 11 36.64107927402928 39.0 35.0 39.0 32.0 39.0 12 35.37868519042878 35.0 35.0 39.0 31.0 39.0 13 34.973800629028474 35.0 34.0 39.0 30.0 39.0 14 35.66881011317032 36.0 34.0 40.0 30.0 41.0 15 36.08575460582202 36.0 35.0 40.0 31.0 41.0 16 36.240094171591416 36.0 35.0 40.0 32.0 41.0 17 36.084514664645006 36.0 35.0 40.0 31.0 41.0 18 36.182246234506444 36.0 35.0 40.0 31.0 41.0 19 36.05669781362367 36.0 35.0 40.0 31.0 41.0 20 35.77534610267231 36.0 34.0 40.0 31.0 41.0 21 35.65545239204367 35.0 34.0 40.0 31.0 41.0 22 35.48596027316764 35.0 34.0 40.0 30.0 41.0 23 35.41677399122526 35.0 34.0 40.0 30.0 41.0 24 35.496940869496385 35.0 34.0 40.0 31.0 41.0 25 35.4074641566421 35.0 34.0 40.0 30.0 41.0 26 35.16318508843239 35.0 34.0 39.0 30.0 41.0 27 35.16140624096114 35.0 34.0 40.0 30.0 41.0 28 35.237175856998014 36.0 34.0 40.0 30.0 41.0 29 35.230434200150405 36.0 34.0 40.0 30.0 41.0 30 35.195702907353784 36.0 34.0 40.0 30.0 41.0 31 34.96723480177687 35.0 34.0 40.0 29.0 41.0 32 34.80646109066109 35.0 34.0 40.0 29.0 41.0 33 34.53954643575902 35.0 33.0 40.0 27.0 41.0 34 34.311520568256896 35.0 34.0 40.0 26.0 41.0 35 34.09315543336287 35.0 33.0 40.0 24.0 41.0 36 33.84027061012109 35.0 33.0 40.0 23.0 41.0 37 33.87287520208986 35.0 33.0 40.0 23.0 41.0 38 33.9238794859382 35.0 33.0 40.0 24.0 41.0 39 33.900457613649856 35.0 33.0 40.0 23.0 41.0 40 33.57347774195218 35.0 33.0 39.0 23.0 41.0 41 33.663878511644334 35.0 33.0 39.0 23.0 41.0 42 33.66136209327037 35.0 33.0 39.0 23.0 41.0 43 33.63096412467308 35.0 33.0 39.0 23.0 41.0 44 33.60339617528764 35.0 33.0 39.0 23.0 41.0 45 33.656747137250605 35.0 33.0 39.0 23.0 41.0 46 33.6607600101083 35.0 33.0 39.0 23.0 41.0 47 33.61637026820483 35.0 33.0 39.0 23.0 41.0 48 33.6546014072457 35.0 33.0 39.0 23.0 41.0 49 33.68652551584293 35.0 33.0 39.0 24.0 41.0 50 33.4943734529279 35.0 33.0 39.0 24.0 41.0 51 33.17943828913997 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 1.0 13 3.0 14 9.0 15 26.0 16 92.0 17 238.0 18 658.0 19 1354.0 20 2561.0 21 3951.0 22 6191.0 23 9175.0 24 13312.0 25 18822.0 26 24623.0 27 28404.0 28 30421.0 29 34663.0 30 41143.0 31 50820.0 32 64879.0 33 86784.0 34 160063.0 35 239328.0 36 77208.0 37 93667.0 38 134870.0 39 190428.0 40 75.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.48961311399543 24.20229689778744 31.50287873390512 13.805211254312011 2 31.37066401171588 26.350310403936145 30.127678166378946 12.151347417969022 3 27.934984152501347 25.59957131069927 34.16445167045728 12.300992866342105 4 25.30812043490042 29.051083445224897 32.380732729880066 13.260063389994611 5 22.7908647771455 32.664571934856276 32.23466476679363 12.309898521204593 6 20.14162274732602 40.92932411407763 29.696553130984675 9.232500007611671 7 85.6421814439644 4.91782440179879 8.118303632593783 1.3216905216430248 8 87.67350803640205 3.456992537517926 7.664648051564503 1.2048513745155172 9 83.23110859418529 5.25555423619928 9.4382434699476 2.0750936996678266 10 57.0563233194192 21.270890230572732 14.557929381962776 7.114857068045293 11 54.30074624820745 15.803959895628768 21.371364285431564 8.523929570732212 12 50.01339654064785 20.45050434930871 21.890251885410862 7.645847224632584 13 18.66069607207339 50.61144551718259 20.184476454057474 10.543381956686549 14 10.314499015049796 49.276358454891714 27.406962547534885 13.002179982523604 15 9.035662200138228 23.10142094670917 56.73823159574112 11.124685257411484 16 9.865029852972967 16.80801539384307 54.74800802574572 18.578946727438247 17 10.474191868908761 18.71382553441541 31.13021133042872 39.68177126624711 18 16.08391714848543 23.31797298161325 43.924744932910734 16.67336493699059 19 31.87623118775556 19.838526015168537 29.032663201834108 19.25257959524179 20 31.63250548801466 20.11087159720256 31.11475963865876 17.141863276124013 21 16.152422185889183 34.89235575122624 31.6617343039736 17.293487758910985 22 19.312331211199506 24.357042165611688 22.576139543238856 33.754487079949946 23 13.533931306193159 33.990677225576434 27.080041285702546 25.395350182527864 24 11.088986521253307 20.70785493982213 55.02857421226819 13.174584326656374 25 10.47799770432008 25.56539490870562 47.549498695359624 16.40710869161468 26 10.012239566682805 41.14435381481718 30.10141790204084 18.741988716459172 27 9.718581306345394 49.40073315613363 27.350255599906227 13.530429937614747 28 9.303745246511571 33.39384611637331 43.41430628754457 13.88810234957055 29 9.462905283412953 25.235505095252446 42.05082769308525 23.250761928249347 30 13.827970150071703 42.58722213595662 30.15903825016822 13.42576946380346 31 31.194986649129376 30.653264036682167 26.643968664273558 11.507780649914903 32 34.948682115313765 22.577052943737574 29.28856757489123 13.185697366057427 33 34.93833024299498 27.231894118614186 21.486833331811 16.342942306579832 34 17.93591277634171 26.461060214405546 26.18095072813243 29.42207628112032 35 18.983963731910862 24.8301075072387 36.334995722241 19.85093303860944 36 36.53213799654735 27.997780436788116 23.35587910230999 12.114202464354545 37 15.95847681332834 44.85451052389608 27.965963652749487 11.221049010026093 38 15.627673599376452 42.376226620753066 25.48844091668874 16.50765886318174 39 19.139698516942058 39.67035376001316 27.85277810761685 13.337169615427943 40 27.69826118991728 24.704819405498064 26.600886607417422 20.996032797167242 41 13.783289642342812 24.22185889180162 29.352962310050756 32.64188915580481 42 15.226843013856287 20.99329259567109 27.801779913105168 35.97808447736745 43 16.608970201831063 22.38683728987983 29.474520693088298 31.52967181520081 44 11.978562490295118 31.460101143881893 35.31084541305493 21.25049095276806 45 11.359657535706349 51.22974153810554 22.35730400708799 15.053296919100118 46 17.413371574367545 43.12940144865319 24.061557104276847 15.395669872702417 47 16.954007240221287 29.92574053945433 26.521877464278425 26.59837475604595 48 17.15952235243254 26.992202604409286 40.53717083329528 15.311104209862899 49 20.828576039069183 28.474803847242903 38.137211022917214 12.559409090770696 50 18.096214563866486 43.42290747557415 25.890946069789887 12.58993189076948 51 15.808374664705902 37.87331439549633 26.34505835106853 19.973252588729245 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1272.0 1 2459.5 2 3647.0 3 8771.0 4 13895.0 5 10707.0 6 7519.0 7 7665.0 8 7811.0 9 8004.0 10 8197.0 11 8062.5 12 7928.0 13 7691.0 14 7454.0 15 7144.0 16 6834.0 17 6199.5 18 5565.0 19 5211.0 20 4857.0 21 5258.5 22 5660.0 23 6609.0 24 7558.0 25 8841.0 26 13191.5 27 16259.0 28 22849.0 29 29439.0 30 31851.5 31 34264.0 32 42767.0 33 51270.0 34 55011.0 35 58752.0 36 61088.0 37 63424.0 38 74116.0 39 84808.0 40 111858.0 41 138908.0 42 165087.0 43 191266.0 44 178762.5 45 166259.0 46 144530.0 47 122801.0 48 104208.0 49 85615.0 50 72277.5 51 58940.0 52 45954.0 53 32968.0 54 25712.0 55 18456.0 56 16104.0 57 13752.0 58 13196.5 59 12641.0 60 11455.0 61 10269.0 62 9099.5 63 7930.0 64 6889.0 65 5848.0 66 4923.5 67 3999.0 68 3300.0 69 2601.0 70 2236.0 71 1871.0 72 1594.0 73 1317.0 74 1127.0 75 683.0 76 429.0 77 316.0 78 203.0 79 156.5 80 110.0 81 87.5 82 65.0 83 48.0 84 31.0 85 20.5 86 10.0 87 6.5 88 3.0 89 2.5 90 2.0 91 2.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1313772.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.125493038921277 #Duplication Level Percentage of deduplicated Percentage of total 1 79.2186526110464 14.358771364542445 2 7.2212382984476475 2.6177700902180914 3 2.8676682354711183 1.5593370191990226 4 1.7410335388067342 1.2622836515267974 5 1.1891853898380107 1.0777285752747876 6 0.8576556482123745 0.9327258888878948 7 0.7142352204144948 0.9062105861042733 8 0.5623995004033762 0.815501458372336 9 0.456404043375439 0.7445293480023341 >10 3.2302339114968284 11.649363358537952 >50 0.6100727619893612 8.026411845288436 >100 1.2937749951112876 50.81434256215238 >500 0.03407992670049245 3.9126555701371566 >1k 0.0029451788506598417 0.8435247975146588 >5k 4.2073983580854883E-4 0.47884388424143776 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6279 0.47793681095349877 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2177 0.16570607380884964 No Hit TTTTGAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1885 0.14347999500674394 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1844 0.14035920996946197 No Hit TTGATAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1472 0.11204379450924513 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011417506233958404 0.0 2 0.0 0.0 0.0 0.05526073017235868 0.0 3 0.0 0.0 0.0 0.0879909147097061 0.0 4 0.0 0.0 0.0 0.13183413864810636 0.0 5 0.0 0.0 0.0 0.23938704737199454 0.0 6 0.0 0.0 0.0 0.3511263750483341 0.0 7 0.0 0.0 0.0 0.42503569873615815 0.0 8 0.0 0.0 0.0 0.6084769655617566 0.0 9 0.0 0.0 0.0 0.6947933126904821 0.0 10 0.0 0.0 0.0 0.8415463261509607 0.0 11 0.0 0.0 0.0 0.9636375261460893 0.0 12 0.0 0.0 0.0 1.0791826892337484 0.0 13 0.0 0.0 0.0 1.1183066772621124 0.0 14 0.0 0.0 0.0 1.1355090533212764 0.0 15 0.0 0.0 0.0 1.1591813495796834 0.0 16 0.0 0.0 0.0 1.2215970503253228 0.0 17 0.0 0.0 0.0 1.293984039848619 0.0 18 0.0 0.0 0.0 1.4090725026869197 0.0 19 0.0 0.0 0.0 1.4583200129093936 0.0 20 0.0 0.0 0.0 1.5139613266228844 0.0 21 0.0 0.0 0.0 1.5880990004353877 0.0 22 0.0 0.0 0.0 1.6629978413301547 0.0 23 0.0 0.0 0.0 1.7462695201298246 0.0 24 0.0 0.0 0.0 1.811425422371614 0.0 25 0.0 0.0 0.0 1.865011584962992 0.0 26 0.0 0.0 0.0 1.9222513495492368 0.0 27 0.0 0.0 0.0 1.977816546554501 0.0 28 0.0 0.0 0.0 2.041526231339989 0.0 29 0.0 0.0 0.0 2.115816138568945 0.0 30 0.0 0.0 0.0 2.21689912709359 0.0 31 0.0 0.0 0.0 2.305270625344428 0.0 32 0.0 0.0 0.0 2.3857259859397217 0.0 33 0.0 0.0 0.0 2.465952996410336 0.0 34 0.0 0.0 0.0 2.5570646961573242 0.0 35 0.0 0.0 0.0 2.691182336052222 0.0 36 0.0 0.0 0.0 2.79051464028766 0.0 37 7.611670822638936E-5 0.0 0.0 2.894642297141361 0.0 38 7.611670822638936E-5 0.0 0.0 2.9964103360400434 0.0 39 7.611670822638936E-5 0.0 0.0 3.101908093641819 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCATCG 30 2.1657397E-6 45.000004 43 GTCGACG 30 2.1657397E-6 45.000004 1 GCGAATT 55 1.8189894E-12 45.000004 14 TCTTCGA 30 2.1657397E-6 45.000004 19 GACCGTA 30 2.1657397E-6 45.000004 29 ACGGGCC 45 3.8562575E-10 45.000004 5 ACGGACC 55 1.8189894E-12 45.000004 39 GCGATAT 90 0.0 45.000004 9 TCGTAAG 65 0.0 45.000004 1 GGACCGT 30 2.1657397E-6 45.000004 8 GTGCGTA 30 2.1657397E-6 45.000004 16 CGTCAAT 30 2.1657397E-6 45.000004 43 GCCGTGC 30 2.1657397E-6 45.000004 32 CGGACCA 55 1.8189894E-12 45.000004 40 CTAGACG 40 6.8157533E-9 45.0 1 CTATGCG 35 1.2121018E-7 45.0 1 TCGCATC 20 7.033656E-4 45.0 21 TCGCAAA 20 7.033656E-4 45.0 27 GCGCACA 20 7.033656E-4 45.0 9 CATTACG 20 7.033656E-4 45.0 38 >>END_MODULE