##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545138_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2209950 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.852972239190933 31.0 31.0 33.0 30.0 33.0 2 31.168141813163192 31.0 31.0 33.0 30.0 34.0 3 31.29788683001878 31.0 31.0 34.0 28.0 34.0 4 35.203365234507565 37.0 35.0 37.0 33.0 37.0 5 35.08449964931333 37.0 35.0 37.0 32.0 37.0 6 35.171848684359375 37.0 35.0 37.0 32.0 37.0 7 35.49398447928686 35.0 35.0 37.0 35.0 37.0 8 35.55235095816647 37.0 35.0 37.0 35.0 37.0 9 37.37523699631213 39.0 37.0 39.0 35.0 39.0 10 36.82064028597932 39.0 37.0 39.0 32.0 39.0 11 36.511721984660284 38.0 35.0 39.0 32.0 39.0 12 35.640959297721665 37.0 35.0 39.0 31.0 39.0 13 35.32489151338265 37.0 35.0 39.0 30.0 39.0 14 36.12043666146293 38.0 35.0 40.0 31.0 41.0 15 36.41981990542772 38.0 35.0 40.0 31.0 41.0 16 36.508901558858796 38.0 35.0 40.0 32.0 41.0 17 36.34001085997421 37.0 35.0 40.0 31.0 41.0 18 36.41859046584764 37.0 35.0 40.0 31.0 41.0 19 36.294474535622975 37.0 35.0 40.0 31.0 41.0 20 36.04364849883481 36.0 34.0 40.0 31.0 41.0 21 35.96314260503631 36.0 34.0 40.0 31.0 41.0 22 35.81082196429784 36.0 34.0 40.0 30.0 41.0 23 35.67634516618023 36.0 34.0 40.0 30.0 41.0 24 35.7305889273513 36.0 34.0 40.0 30.0 41.0 25 35.59188035928415 36.0 34.0 40.0 30.0 41.0 26 35.33953211611122 35.0 34.0 40.0 29.0 41.0 27 35.36212402995543 36.0 34.0 40.0 29.0 41.0 28 35.39567003778366 36.0 34.0 40.0 29.0 41.0 29 35.332470870381684 36.0 34.0 40.0 29.0 41.0 30 35.290872191678545 36.0 34.0 40.0 29.0 41.0 31 35.123222697346094 36.0 34.0 40.0 29.0 41.0 32 34.99198217154234 36.0 34.0 40.0 28.0 41.0 33 34.7384180637571 35.0 34.0 40.0 27.0 41.0 34 34.46724767528677 35.0 34.0 40.0 25.0 41.0 35 34.23829407905156 35.0 33.0 40.0 24.0 41.0 36 34.02105477499491 35.0 33.0 40.0 23.0 41.0 37 34.043941265639496 35.0 33.0 40.0 23.0 41.0 38 34.05783253014774 35.0 33.0 40.0 23.0 41.0 39 34.03251023778819 35.0 33.0 40.0 23.0 41.0 40 33.78935134279056 35.0 33.0 40.0 23.0 41.0 41 33.790934184031315 35.0 33.0 40.0 23.0 41.0 42 33.76052489875337 35.0 33.0 40.0 23.0 41.0 43 33.718437068711964 35.0 33.0 40.0 23.0 41.0 44 33.664434941967016 35.0 33.0 40.0 23.0 41.0 45 33.72349057670988 35.0 33.0 40.0 23.0 41.0 46 33.70415439263332 35.0 33.0 40.0 23.0 41.0 47 33.62563134912555 35.0 33.0 40.0 23.0 41.0 48 33.65696870969931 35.0 33.0 40.0 23.0 41.0 49 33.64950247743162 36.0 33.0 40.0 23.0 41.0 50 33.48772641914975 35.0 33.0 39.0 23.0 41.0 51 33.21337541573339 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 5.0 13 7.0 14 10.0 15 51.0 16 173.0 17 511.0 18 1184.0 19 2471.0 20 4409.0 21 7285.0 22 11357.0 23 16638.0 24 24033.0 25 33628.0 26 43101.0 27 49223.0 28 52693.0 29 58414.0 30 69121.0 31 84262.0 32 106180.0 33 138016.0 34 233265.0 35 330281.0 36 151200.0 37 184971.0 38 261819.0 39 345548.0 40 91.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.16692685354872 23.915654200321274 29.00106337247449 14.916355573655512 2 32.615127039073286 25.831127401072422 29.67736826625037 11.876377293603928 3 27.1757279576461 26.49154958256974 33.76813955066857 12.56458290911559 4 25.20400914047829 27.417679133012058 33.571800266974364 13.806511459535283 5 21.66211905246725 31.932577660128057 32.67834113893979 13.726962148464898 6 19.76338831195276 40.39824430416978 30.15226588836851 9.686101495508947 7 85.0323762981063 4.71816104436752 8.748387972578566 1.5010746849476233 8 87.03536279101337 3.2096201271521982 8.292359555646055 1.4626575261883754 9 81.78718975542432 5.635421615873662 10.073214326115975 2.5041743025860312 10 47.62311364510509 25.777325278852466 17.6419376003982 8.957623475644246 11 42.90988483902351 20.158510373537865 24.660376931604787 12.271227855833843 12 41.75067309215141 21.26921423561619 26.22941695513473 10.750695717097672 13 17.843028122808207 44.83567501527184 23.552569062648477 13.768727799271478 14 11.671259530758613 45.1221520848888 27.5527500622186 15.653838322133984 15 11.35668227787959 23.83072015203964 50.249688906988844 14.562908663091925 16 11.438856082716804 19.927735921627185 48.330188465802394 20.303219529853617 17 11.099798637978235 20.857575963257087 33.23210932374035 34.810516075024324 18 15.309124640828978 24.031041426276612 42.65657594063214 18.003257992262267 19 27.532749609719676 23.39632118373719 28.14660965180208 20.924319554741057 20 28.510102038507657 21.6988167153103 32.39344781556144 17.3976334306206 21 15.484467974388561 32.859114459603155 31.456413041019026 20.200004524989254 22 18.77114866852191 26.804362089640037 24.043168397475057 30.381320844362996 23 14.085567546777074 33.62062490101586 27.56284078825313 24.730966763953933 24 12.495033824294667 22.451050928754043 51.2218375981357 13.832077648815583 25 12.563270662232176 27.83556189054051 42.404986538156976 17.196180909070343 26 12.541550713817054 36.58508111043236 30.371411117898596 20.50195705785199 27 11.055227493834701 42.84069775334284 27.781669268535484 18.322405484286975 28 10.472227878458789 31.978596800832598 40.50449105183375 17.04468426887486 29 11.249213783117264 23.415823887418266 40.6856716215299 24.64929070793457 30 14.583090115160976 39.04477476865992 31.319260616756033 15.052874499423064 31 26.658793185366186 31.707685694246475 27.814113441480576 13.819407678906762 32 29.686553994434263 23.193601665196045 29.766329554967307 17.353514785402385 33 29.097490893459128 29.897780492771332 23.44347157175502 17.561257042014525 34 17.64374759609946 27.106359872395302 27.750356342903686 27.499536188601553 35 19.04346252177651 25.210072626077512 35.171248218285484 20.575216633860492 36 31.023824068417838 29.505282924953054 24.981062919975567 14.489830086653544 37 15.335867327315098 41.32659109934614 30.390054073621574 12.94748749971719 38 15.637322111359985 37.77216679110387 29.184913685829994 17.405597411706147 39 18.073757324826353 37.54383583338989 29.081789180750693 15.300617661033055 40 24.809113328355846 26.844543994208014 27.66180230321953 20.684540374216613 41 14.182764315934747 24.73503925428177 31.925428177108078 29.156768252675402 42 14.719201791895745 24.033168171225594 28.95721622661146 32.2904138102672 43 15.620715400800922 24.65055770492545 30.404398289554063 29.32432860471956 44 13.610534174981334 29.533292608430056 33.6666440417204 23.18952917486821 45 12.329600217199484 46.44625444014571 22.972239190931923 18.251906151722892 46 16.977533428358107 40.33584470236883 26.08678929387543 16.599832575397635 47 16.070227833208897 30.776985904658478 29.119029842304123 24.033756419828503 48 16.212176746080228 27.1312020633951 38.7177085454422 17.938912645082468 49 20.240684178375076 28.001040747528222 36.86771193918415 14.890563134912554 50 17.693703477454243 38.857575963257084 28.489287087943165 14.959433471345507 51 15.335098079142062 34.982601416321636 27.550713817054685 22.131586687481615 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2062.0 1 3835.0 2 5608.0 3 16388.5 4 27169.0 5 20131.0 6 13093.0 7 13208.0 8 13323.0 9 13901.5 10 14480.0 11 14517.0 12 14554.0 13 14259.5 14 13965.0 15 13590.0 16 13215.0 17 12806.5 18 12398.0 19 11200.0 20 10002.0 21 9880.5 22 9759.0 23 11250.5 24 12742.0 25 14996.0 26 24472.0 27 31694.0 28 39251.0 29 46808.0 30 54055.0 31 61302.0 32 74434.0 33 87566.0 34 104673.0 35 121780.0 36 121485.5 37 121191.0 38 129906.0 39 138621.0 40 179627.5 41 220634.0 42 249168.0 43 277702.0 44 263686.5 45 249671.0 46 219726.5 47 189782.0 48 161126.0 49 132470.0 50 115775.0 51 99080.0 52 81379.5 53 63679.0 54 54818.5 55 45958.0 56 41772.5 57 37587.0 58 33455.5 59 29324.0 60 25009.5 61 20695.0 62 17950.0 63 15205.0 64 13456.0 65 11707.0 66 9786.0 67 7865.0 68 7319.5 69 6774.0 70 5883.5 71 4993.0 72 4478.0 73 3963.0 74 3172.0 75 1631.5 76 882.0 77 716.0 78 550.0 79 388.5 80 227.0 81 178.0 82 129.0 83 100.0 84 71.0 85 46.0 86 21.0 87 13.5 88 6.0 89 6.0 90 6.0 91 4.5 92 3.0 93 2.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2209950.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.876381216828282 #Duplication Level Percentage of deduplicated Percentage of total 1 79.33224161075168 14.975056354300762 2 6.974936221822374 2.633231101723662 3 2.7198630835376587 1.5402351726730474 4 1.626225173460302 1.2278898527455744 5 1.149471240106311 1.084892866301354 6 0.8551621398524115 0.9685419932431647 7 0.6950831891545508 0.9184458679123044 8 0.56824611064679 0.8581144167639035 9 0.4960573823750645 0.8427391429620306 >10 3.871334012775334 14.443341211539654 >50 0.5658203598891385 7.736826789670209 >100 1.1080316978189984 47.060573285741846 >500 0.034641025670202 4.180582805564453 >1k 0.002646189460918208 0.8598294167466427 >5k 0.0 0.0 >10k+ 2.405626782652916E-4 0.6696997221114067 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14748 0.6673454150546393 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3255 0.14728840019004955 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2925 0.1323559356546528 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.021131699812212947 0.0 2 0.0 0.0 0.0 0.07398357428901106 0.0 3 0.0 0.0 0.0 0.10778524401004548 0.0 4 0.0 0.0 0.0 0.1614516165524107 0.0 5 0.0 0.0 0.0 0.29579854747844975 0.0 6 0.0 0.0 0.0 0.4391954569107898 0.0 7 0.0 0.0 0.0 0.5463472024253943 0.0 8 0.0 0.0 0.0 0.8073938324396479 0.0 9 0.0 0.0 0.0 0.9219665603294193 0.0 10 0.0 0.0 0.0 1.1170388470327384 0.0 11 0.0 0.0 0.0 1.2618837530260865 0.0 12 0.0 0.0 0.0 1.4027014185841309 0.0 13 0.0 0.0 0.0 1.4615715287676192 0.0 14 0.0 0.0 0.0 1.486911468585262 0.0 15 0.0 0.0 0.0 1.5228851331478088 0.0 16 0.0 0.0 0.0 1.596687707866694 0.0 17 0.0 0.0 0.0 1.6897214869114685 0.0 18 0.0 0.0 0.0 1.83135365053508 0.0 19 0.0 0.0 0.0 1.887508767166678 0.0 20 0.0 0.0 0.0 1.9468766261680128 0.0 21 0.0 0.0 0.0 2.028507432294848 0.0 22 0.0 0.0 0.0 2.122898708115568 0.0 23 0.0 0.0 0.0 2.2314532002986494 0.0 24 0.0 0.0 0.0 2.31715649675332 0.0 25 0.0 0.0 0.0 2.3913210706124572 0.0 26 0.0 0.0 0.0 2.467431389850449 0.0 27 0.0 0.0 0.0 2.5474331998461506 0.0 28 0.0 0.0 0.0 2.6270730107015994 0.0 29 0.0 0.0 0.0 2.7110568112400735 0.0 30 0.0 0.0 0.0 2.8363537636598113 0.0 31 0.0 0.0 0.0 2.9436865087445416 0.0 32 0.0 0.0 0.0 3.0488020090952284 0.0 33 0.0 0.0 0.0 3.161066992465893 0.0 34 0.0 0.0 0.0 3.286454444670694 0.0 35 0.0 0.0 0.0 3.447317812620195 0.0 36 0.0 0.0 0.0 3.5714835177266453 0.0 37 0.0 0.0 0.0 3.686915993574515 0.0 38 0.0 0.0 0.0 3.81212244620919 0.0 39 0.0 4.524989253150524E-5 0.0 3.936650150455893 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 80 0.0 45.000004 1 TGTATCG 65 0.0 45.000004 1 TACGGAC 20 7.034701E-4 45.000004 41 CGTTAGT 20 7.034701E-4 45.000004 25 CCCGTAG 20 7.034701E-4 45.000004 24 CGTAGAT 20 7.034701E-4 45.000004 41 CACTACG 40 6.8193913E-9 45.000004 1 TATTACG 65 0.0 45.000004 1 ACGTCCA 20 7.034701E-4 45.000004 14 ACCGTAA 20 7.034701E-4 45.000004 24 CCACGTA 20 7.034701E-4 45.000004 10 TCGAACA 20 7.034701E-4 45.000004 44 ATTCGAT 35 1.2126111E-7 45.0 14 GCCGATA 45 3.8562575E-10 45.0 9 GTGTCGA 25 3.891979E-5 45.0 8 GACGGTT 50 2.1827873E-11 45.0 28 TCGATTG 60 0.0 44.999996 1 TCCGTAA 30 2.1664146E-6 44.999996 12 TACGAAG 115 0.0 43.04348 1 TCGCGCA 105 0.0 42.857143 34 >>END_MODULE