SRR1545136_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545136_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1456905
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5513	0.3784049062910759	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2301	0.1579375456876049	No Hit
TTGTTAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA	1781	0.12224544496724221	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1611	0.11057687357789286	No Hit
TGGTTAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA	1465	0.10055562991409872	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	35	1.2122291E-7	45.000004	25
TAACGCG	130	0.0	45.000004	1
GCGCATG	130	0.0	45.000004	1
CTCGATT	35	1.2122291E-7	45.000004	41
CGTAAGG	125	0.0	45.000004	2
GGTTGAC	35	1.2122291E-7	45.000004	23
TTACGAG	35	1.2122291E-7	45.000004	1
TACTACC	35	1.2122291E-7	45.000004	27
ATACGTC	35	1.2122291E-7	45.000004	29
TCGAAAG	35	1.2122291E-7	45.000004	1
TGCGTTG	55	1.8189894E-12	45.000004	1
ATCGACG	35	1.2122291E-7	45.000004	1
ATTTCGA	85	0.0	45.000004	1
ACGCGAG	40	6.8175723E-9	45.0	1
CTTAACG	20	7.0339086E-4	45.0	1
CTTCGCA	20	7.0339086E-4	45.0	29
AGGTACG	20	7.0339086E-4	45.0	1
ATCTCGG	20	7.0339086E-4	45.0	11
CTCACGT	25	3.891321E-5	45.0	45
CGTATGG	165	0.0	45.0	2