##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545135_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1545429 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.82394208986631 31.0 31.0 33.0 28.0 33.0 2 31.13097140017432 31.0 31.0 33.0 30.0 34.0 3 31.26969016370212 31.0 31.0 34.0 28.0 34.0 4 35.143188719766485 35.0 35.0 37.0 32.0 37.0 5 35.01305009806339 35.0 35.0 37.0 32.0 37.0 6 35.091711104165896 37.0 35.0 37.0 32.0 37.0 7 35.516595068424365 36.0 35.0 37.0 35.0 37.0 8 35.58267380772588 37.0 35.0 37.0 35.0 37.0 9 37.38123524277078 39.0 37.0 39.0 35.0 39.0 10 36.852561327631356 39.0 37.0 39.0 32.0 39.0 11 36.48299857191757 38.0 35.0 39.0 32.0 39.0 12 35.33110417883966 37.0 35.0 39.0 31.0 39.0 13 34.90821577697843 35.0 34.0 39.0 30.0 39.0 14 35.59118988966818 37.0 34.0 40.0 29.0 41.0 15 35.98640312819288 37.0 34.0 40.0 31.0 41.0 16 36.14093368249205 36.0 34.0 40.0 31.0 41.0 17 35.971118699079675 36.0 34.0 40.0 31.0 41.0 18 36.0714513575195 36.0 35.0 40.0 31.0 41.0 19 35.949291102988234 36.0 35.0 40.0 31.0 41.0 20 35.69598150416486 36.0 34.0 40.0 30.0 41.0 21 35.55788069202791 35.0 34.0 40.0 30.0 41.0 22 35.38111035835357 35.0 34.0 40.0 30.0 41.0 23 35.27521354911808 35.0 34.0 40.0 29.0 41.0 24 35.39152688347378 35.0 34.0 40.0 30.0 41.0 25 35.2602973025613 35.0 34.0 40.0 30.0 41.0 26 35.00071889423584 35.0 34.0 39.0 29.0 41.0 27 35.01172425261853 35.0 34.0 39.0 29.0 41.0 28 35.05487990713258 36.0 34.0 40.0 29.0 41.0 29 35.0504707754287 36.0 34.0 40.0 29.0 41.0 30 35.014494357230255 36.0 34.0 40.0 29.0 41.0 31 34.80917790464654 35.0 34.0 40.0 29.0 41.0 32 34.66723867612165 35.0 34.0 40.0 27.0 41.0 33 34.41806126324794 35.0 33.0 40.0 26.0 41.0 34 34.175844377192355 35.0 33.0 40.0 25.0 41.0 35 33.96615955828447 35.0 33.0 40.0 24.0 41.0 36 33.72029643548814 35.0 33.0 40.0 23.0 41.0 37 33.760803634460075 35.0 33.0 40.0 23.0 41.0 38 33.79085936655777 35.0 33.0 40.0 23.0 41.0 39 33.7738886742775 35.0 33.0 40.0 23.0 41.0 40 33.48333763634564 35.0 32.0 40.0 23.0 41.0 41 33.53901602726492 35.0 33.0 39.0 23.0 41.0 42 33.52045030861981 35.0 33.0 39.0 23.0 41.0 43 33.464973803390514 35.0 33.0 39.0 23.0 41.0 44 33.41979993904605 35.0 33.0 39.0 23.0 41.0 45 33.483569934303034 35.0 33.0 39.0 23.0 41.0 46 33.48132719134946 35.0 33.0 39.0 23.0 41.0 47 33.414811033052956 35.0 33.0 39.0 23.0 41.0 48 33.451741878792234 35.0 33.0 39.0 23.0 41.0 49 33.47934715862068 35.0 33.0 39.0 23.0 41.0 50 33.31136661729526 35.0 32.0 39.0 23.0 41.0 51 32.990129601554 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 3.0 11 1.0 12 3.0 13 3.0 14 5.0 15 43.0 16 139.0 17 377.0 18 885.0 19 2021.0 20 3458.0 21 5573.0 22 8407.0 23 12459.0 24 17680.0 25 24086.0 26 31001.0 27 35564.0 28 38809.0 29 43662.0 30 52113.0 31 63015.0 32 79047.0 33 104087.0 34 179431.0 35 253516.0 36 95288.0 37 115308.0 38 162831.0 39 216526.0 40 87.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.028563589786394 24.443568743695117 28.77000496302321 13.757862703495274 2 30.93134657108156 25.996988538457604 30.970817811753243 12.100847078707595 3 27.93392643725464 25.618064628009442 34.006026805501904 12.441982129234018 4 25.43921461290037 28.80882913417569 33.05011100477602 12.701845248147926 5 22.011299127944408 33.504742048971515 31.854908895847046 12.629049927237032 6 20.385925202645996 41.30063561638872 28.859494677529668 9.453944503435615 7 85.14839568818755 5.198103568653106 8.17080564684628 1.4826950963130625 8 87.21300040312431 3.7664622574055486 7.552013065627731 1.468524273842409 9 82.1652110837832 5.872155886812012 9.508233636097161 2.454399393307619 10 54.23587884011495 22.925025996017933 15.062031319458868 7.777063844408253 11 50.885417576608184 18.81328744316303 20.92525764690581 9.37603733332298 12 46.933181660238034 21.201944573319125 22.716216662169533 9.148657104273312 13 18.661355520053007 48.461042208991806 21.617298497698698 11.260303773256487 14 11.343516913426628 49.383504515574636 26.761695296257543 12.511283274741189 15 10.085160819422956 24.200529432280614 54.595196544131106 11.119113204165316 16 10.47443784217845 17.670497965289897 53.387700114337186 18.46736407819447 17 10.830067249935132 19.076838858336423 31.762895610215676 38.33019828151277 18 15.62886421828502 23.335397485099605 43.45188293994742 17.583855356667954 19 30.436079561079804 20.436396625144216 29.463210538950673 19.664313274825307 20 31.160862129544615 20.394790055059143 31.73960110752419 16.704746707872054 21 17.080694098531865 33.562460650084866 31.837502725780347 17.519342525602923 22 20.198145628171854 25.13936259769941 22.381293479027505 32.281198295101234 23 13.411227562055583 34.11402270825771 26.237439571795274 26.237310157891436 24 11.526637587362472 21.19819157010772 53.98630412655645 13.288866715973363 25 11.077571341032167 26.404189386895162 45.94698300601321 16.571256266059457 26 10.927062970864402 39.05433378045837 30.366843122524557 19.651760126152674 27 10.812596372916516 48.005505267469424 27.26278593193217 13.919112427681894 28 9.985123871753409 33.976067486762574 42.15289088013749 13.885917761346525 29 10.019547970175271 26.02261249141824 40.12549266255518 23.8323468758513 30 14.03720261493734 41.907780946261525 30.62599446496733 13.429021973833802 31 29.38769752605911 31.818220054107954 26.761760003209467 12.032322416623476 32 32.48748405782472 23.119082144828393 30.80749746510516 13.585936332241728 33 32.349917078041116 29.045591871253873 23.22714275453612 15.377348296168897 34 18.659673139303067 26.68068219245271 26.86477347066737 27.794871197576853 35 18.93726596304327 24.91269414512087 34.75158030553329 21.39845958630257 36 34.51837645081074 27.047311782035926 25.389972622488642 13.044339144664685 37 16.087765921307287 42.06670122017899 29.343826212656808 12.501706645856911 38 15.396825088697055 40.49587525534981 26.173962051960974 17.93333760399216 39 18.52650623225007 38.464465206748415 28.51046537886891 14.498563182132598 40 25.563193132780604 25.693059985285636 27.253985786470942 21.489761095462814 41 14.095374164714134 24.97086569489766 29.792892458987115 31.140867681401087 42 15.566616130537216 22.411899867286042 28.435922970256154 33.585561031920584 43 16.86004339248196 22.411446918622595 30.50583365525042 30.222676033645023 44 12.54894272075909 30.805103307884092 34.34205000682658 22.303903964530235 45 12.307715203998372 49.17560107905313 23.378945263742303 15.137738453206198 46 17.67179210432831 41.60003468292623 24.788650918288706 15.939522294456749 47 17.09997677020426 30.892392986025243 27.099853826995613 24.907776416774887 48 17.0655526717824 27.92156740943777 38.49960108164141 16.513278837138426 49 21.138467053484824 28.427381652602612 37.08750126987393 13.346650024038635 50 18.339244313391298 41.339783322300796 26.358635692742922 13.962336671564982 51 16.34743491936543 37.08465416398942 25.46613270489942 21.101778211745735 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2078.0 1 2791.0 2 3504.0 3 8679.0 4 13854.0 5 11050.0 6 8246.0 7 8637.0 8 9028.0 9 9442.0 10 9856.0 11 9713.0 12 9570.0 13 9325.0 14 9080.0 15 8345.5 16 7611.0 17 7343.5 18 7076.0 19 7190.0 20 7304.0 21 7284.0 22 7264.0 23 8219.5 24 9175.0 25 11625.5 26 18151.5 27 22227.0 28 25501.5 29 28776.0 30 35503.5 31 42231.0 32 47000.0 33 51769.0 34 63478.0 35 75187.0 36 74546.0 37 73905.0 38 85493.0 39 97081.0 40 130178.0 41 163275.0 42 192780.0 43 222285.0 44 210512.5 45 198740.0 46 174441.5 47 150143.0 48 127090.0 49 104037.0 50 88555.5 51 73074.0 52 56288.5 53 39503.0 54 30212.0 55 20921.0 56 17890.0 57 14859.0 58 13765.0 59 12671.0 60 11817.5 61 10964.0 62 9511.0 63 8058.0 64 7006.0 65 5954.0 66 4869.0 67 3784.0 68 3239.0 69 2694.0 70 2400.0 71 2106.0 72 1856.0 73 1606.0 74 1279.5 75 710.0 76 467.0 77 349.0 78 231.0 79 158.0 80 85.0 81 74.5 82 64.0 83 41.0 84 18.0 85 18.0 86 18.0 87 12.5 88 7.0 89 6.5 90 6.0 91 5.5 92 5.0 93 2.5 94 0.0 95 1.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1545429.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.53692542781175 #Duplication Level Percentage of deduplicated Percentage of total 1 79.87234215824434 15.604599924902843 2 7.5661780709034705 2.9563971348957128 3 2.828342414467764 1.6577134450732118 4 1.5821614305781366 1.2364227953586004 5 1.0840672376632479 1.0589670390480375 6 0.7483099679638908 0.877180562459924 7 0.5821210374247888 0.7960998708689958 8 0.4651974374995217 0.7270822116509817 9 0.39247593063865305 0.6900995690188543 >10 3.1822447934385467 12.732024318848294 >50 0.569069614994255 7.993423779250889 >100 1.0915486695046013 48.12880394934018 >500 0.03194776593671974 4.0699856243883605 >1k 0.00366068151358247 1.0438444575720878 >5k 3.327892285074972E-4 0.4273553173230354 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6573 0.4253187949753758 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2573 0.16649098729220171 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1876 0.12139024180340863 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1598 0.10340170916942804 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1569 0.10152520756372503 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.032677010720000725 0.0 2 0.0 0.0 0.0 0.12656679795707212 0.0 3 0.0 0.0 0.0 0.17917354986867723 0.0 4 0.0 0.0 0.0 0.2524218194430155 0.0 5 0.0 0.0 0.0 0.4262246923022669 0.0 6 0.0 0.0 0.0 0.5901274015176369 0.0 7 0.0 0.0 0.0 0.7037528090905503 0.0 8 0.0 0.0 0.0 0.9970694221475073 0.0 9 0.0 0.0 0.0 1.1081712585955097 0.0 10 0.0 0.0 0.0 1.3132275892325043 0.0 11 0.0 0.0 0.0 1.503530734831558 0.0 12 0.0 0.0 0.0 1.6730629488640372 0.0 13 0.0 0.0 0.0 1.7419111457077614 0.0 14 0.0 0.0 0.0 1.7666292013415046 0.0 15 0.0 0.0 0.0 1.8117946537822185 0.0 16 0.0 0.0 0.0 1.9199199704418644 0.0 17 0.0 0.0 0.0 2.050433892466105 0.0 18 0.0 0.0 0.0 2.2545843257762086 0.0 19 0.0 0.0 0.0 2.3371503964271407 0.0 20 0.0 0.0 0.0 2.4241812467606083 0.0 21 0.0 0.0 0.0 2.545506781612096 0.0 22 0.0 0.0 0.0 2.6643734522905937 0.0 23 0.0 0.0 0.0 2.8102229219200625 0.0 24 0.0 0.0 0.0 2.9226836043584012 0.0 25 0.0 0.0 0.0 3.0150851317012948 0.0 26 0.0 0.0 0.0 3.1134396986209008 0.0 27 0.0 0.0 0.0 3.2089471596559918 0.0 28 0.0 0.0 0.0 3.311701799306212 0.0 29 0.0 0.0 0.0 3.429597865705898 0.0 30 0.0 0.0 0.0 3.5886475535272084 0.0 31 0.0 0.0 0.0 3.736114696954697 0.0 32 0.0 0.0 0.0 3.867987464969274 0.0 33 0.0 0.0 0.0 4.00303087362797 0.0 34 0.0 0.0 0.0 4.1336095026041315 0.0 35 0.0 0.0 0.0 4.325659735905046 0.0 36 0.0 0.0 0.0 4.475262208745921 0.0 37 0.0 0.0 0.0 4.627711787471311 0.0 38 0.0 0.0 0.0 4.7727200667258085 0.0 39 0.0 0.0 0.0 4.918051880739911 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCGT 20 7.0340413E-4 45.000004 25 AACCGTC 35 1.2122837E-7 45.000004 29 GGTACGA 20 7.0340413E-4 45.000004 8 ACGCCTA 40 6.8175723E-9 45.000004 7 CAAGTCG 35 1.2122837E-7 45.000004 1 ATTCGTC 40 6.8175723E-9 45.000004 38 AAGCGTG 35 1.2122837E-7 45.000004 1 TAACGTG 20 7.0340413E-4 45.000004 1 TCGATTG 30 2.165989E-6 45.000004 1 CCATGCG 20 7.0340413E-4 45.000004 1 CTACGCT 20 7.0340413E-4 45.000004 37 ACGCTAG 40 6.8175723E-9 45.000004 1 CCGACAG 20 7.0340413E-4 45.000004 11 CAGTCGC 20 7.0340413E-4 45.000004 37 TAGGCCG 20 7.0340413E-4 45.000004 1 ATACGTT 35 1.2122837E-7 45.000004 37 TAAATCG 20 7.0340413E-4 45.000004 17 GTGCGTA 20 7.0340413E-4 45.000004 16 CGTCAAT 20 7.0340413E-4 45.000004 18 ATACCGG 35 1.2122837E-7 45.000004 2 >>END_MODULE