SRR1545134_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545134_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1412592
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4572	0.3236603350436644	No Hit
ATTGAAGGGGAATAATTTAGATTTTGATGAGATTCAGGAAATTATTGAAAG	2065	0.14618516882440225	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2009	0.1422208252630625	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1990	0.1408757801261794	No Hit
AAGAGAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA	1602	0.1134085425940399	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAT	30	2.1658561E-6	45.000004	20
CTTAACG	30	2.1658561E-6	45.000004	1
CTCACGT	60	0.0	45.000004	45
CGACGGT	60	0.0	45.000004	28
ACGTTAG	60	0.0	45.000004	1
TTCACGA	30	2.1658561E-6	45.000004	19
GTTAGCG	30	2.1658561E-6	45.000004	14
CGATTGC	60	0.0	45.000004	10
GTAGCGT	30	2.1658561E-6	45.000004	9
CTAACGG	60	0.0	45.000004	2
ACGATAC	30	2.1658561E-6	45.000004	22
TATCTAG	60	0.0	45.000004	1
CTACGCG	30	2.1658561E-6	45.000004	1
CGTAGAA	30	2.1658561E-6	45.000004	45
TACGAAG	125	0.0	45.000004	1
ACGTGCG	30	2.1658561E-6	45.000004	1
ACCAGAC	30	2.1658561E-6	45.000004	22
CGAGCAA	30	2.1658561E-6	45.000004	19
ACGTCAT	30	2.1658561E-6	45.000004	10
AATTACG	60	0.0	45.000004	40