##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545132_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1643167 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.877089182049055 31.0 31.0 33.0 30.0 33.0 2 31.17651583801281 31.0 31.0 33.0 30.0 34.0 3 31.34378124682397 31.0 31.0 34.0 28.0 34.0 4 35.18029329946378 37.0 35.0 37.0 32.0 37.0 5 35.0659811206043 37.0 35.0 37.0 32.0 37.0 6 35.13272235871339 37.0 35.0 37.0 32.0 37.0 7 35.560676425463754 36.0 35.0 37.0 35.0 37.0 8 35.63478696930988 37.0 35.0 37.0 35.0 37.0 9 37.47733127551856 39.0 37.0 39.0 35.0 39.0 10 37.02003204786854 39.0 37.0 39.0 33.0 39.0 11 36.56174631063063 39.0 35.0 39.0 32.0 39.0 12 34.8417026388675 35.0 34.0 39.0 30.0 39.0 13 34.273418343966256 35.0 33.0 39.0 27.0 39.0 14 34.865773837960475 35.0 33.0 40.0 26.0 41.0 15 35.409976587893986 35.0 33.0 40.0 30.0 41.0 16 35.67800473110767 35.0 34.0 40.0 31.0 41.0 17 35.55296022863166 35.0 34.0 40.0 31.0 41.0 18 35.69340000133888 36.0 35.0 39.0 31.0 41.0 19 35.531101220995794 36.0 34.0 39.0 31.0 41.0 20 35.185930584048975 35.0 34.0 39.0 30.0 41.0 21 35.029057910729705 35.0 34.0 39.0 30.0 41.0 22 34.85194383772313 35.0 34.0 39.0 29.0 41.0 23 34.845796562370104 35.0 34.0 39.0 29.0 41.0 24 34.955060562925134 35.0 34.0 39.0 30.0 41.0 25 34.881980346489435 35.0 34.0 39.0 30.0 41.0 26 34.64792805600405 35.0 34.0 38.0 29.0 41.0 27 34.641609769426964 35.0 34.0 39.0 29.0 41.0 28 34.79262972053358 35.0 34.0 38.0 29.0 41.0 29 34.808956728074506 35.0 34.0 38.0 29.0 41.0 30 34.778745556598935 35.0 34.0 38.0 29.0 41.0 31 34.440297912506765 35.0 34.0 38.0 29.0 41.0 32 34.26037767311539 35.0 34.0 38.0 28.0 41.0 33 34.01503012171009 35.0 33.0 38.0 27.0 41.0 34 33.858176922978615 35.0 33.0 38.0 25.0 41.0 35 33.62571911436878 35.0 33.0 38.0 24.0 41.0 36 33.334494302770196 35.0 33.0 38.0 23.0 41.0 37 33.361189702568275 35.0 33.0 38.0 23.0 41.0 38 33.46123187722246 35.0 33.0 38.0 23.0 41.0 39 33.52308621095725 35.0 33.0 38.0 23.0 41.0 40 33.06344881561034 35.0 32.0 38.0 23.0 41.0 41 33.21988331070427 35.0 32.0 38.0 23.0 41.0 42 33.21582468489204 35.0 32.0 38.0 23.0 41.0 43 33.20778046297181 35.0 33.0 38.0 23.0 41.0 44 33.17656209015882 35.0 33.0 38.0 23.0 41.0 45 33.263444312111915 35.0 33.0 38.0 23.0 40.0 46 33.27005167460155 35.0 33.0 38.0 23.0 40.0 47 33.23578796312243 35.0 33.0 38.0 23.0 40.0 48 33.29793380709325 35.0 33.0 38.0 23.0 40.0 49 33.35161063969761 35.0 33.0 38.0 24.0 40.0 50 33.07286477880824 35.0 32.0 38.0 24.0 40.0 51 32.81360141726313 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 3.0 13 2.0 14 11.0 15 33.0 16 141.0 17 422.0 18 1049.0 19 2051.0 20 3779.0 21 6031.0 22 9027.0 23 13278.0 24 18848.0 25 25622.0 26 32727.0 27 37116.0 28 41398.0 29 47150.0 30 56689.0 31 69345.0 32 89033.0 33 120113.0 34 228357.0 35 338536.0 36 79297.0 37 94739.0 38 134682.0 39 193561.0 40 125.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.843770596658764 25.22920676961015 28.854279571096548 13.072743062634535 2 29.42512842577778 26.61019847647865 31.4948511015618 12.469821996181764 3 28.47136048861741 26.643731282334667 32.740555281356066 12.144352947691866 4 25.297611259232934 27.918099621036692 33.279271066178914 13.505018053551465 5 21.718486313320557 33.6530614356301 31.875640151001083 12.75281210004826 6 18.206548695293908 42.6400968373878 29.801109686355677 9.352244780962616 7 87.33804902362328 4.873150446667928 6.63194915671992 1.1568513729888685 8 90.15243125014074 2.6063084275670096 6.17502664062752 1.0662336816647364 9 85.92857573210757 4.693801664712108 7.562712737049855 1.8149098661304663 10 66.11312179468064 16.775044776337403 11.545935379666219 5.565898049315742 11 63.745072777143164 13.614440893713178 16.310454141301523 6.330032187842137 12 57.41479715695361 19.80285631344836 16.719907349648576 6.062439179949451 13 16.90558537263711 58.74801526564251 16.077428526741347 8.268970834979038 14 8.491772290947907 58.66689143586744 23.613728854096998 9.227607419087652 15 7.5029500957602 20.594498307232314 63.768929147189546 8.133622449817942 16 7.695505082563124 14.108304268525353 61.301194583386845 16.894996065524683 17 7.794886338394089 14.458238267930163 30.4030570234188 47.343818370256955 18 15.41005874631124 21.74155152823785 46.694584299709035 16.153805425741872 19 37.32426466695108 16.507877775052687 27.56220152912029 18.605656028875945 20 36.00668708658341 18.972386860252183 28.0921537494363 16.928772303728106 21 15.109115506823104 36.690245118116415 31.13018944513857 17.070449929921914 22 19.14595412395697 24.980601484815605 18.840811676475976 37.03263271475145 23 11.224543822995471 36.283530523677754 23.834643709373424 28.657281943953354 24 8.872865630821456 18.88785497761335 61.305332933292846 10.933946458272349 25 7.889277231103107 24.093108004238157 52.48389238586218 15.533722378796554 26 7.960298618460571 44.34521871483544 29.26348934709619 18.430993319607804 27 8.066556838105926 55.005547214616655 25.797073578035583 11.130822369241836 28 6.9153044091075335 35.83750160513204 46.56106165715354 10.686132328606892 29 7.268889893723523 25.18831013524493 43.42784391361316 24.11495605741839 30 13.221967091598117 46.4168279913119 28.320189000874528 12.041015916215454 31 36.166317848398855 30.07935285944764 24.01977400958028 9.734555282573226 32 39.591593550746815 20.39019770966676 29.90615074426397 10.112057995322447 33 39.223280409112405 26.828557292107252 18.8837774857942 15.064384812986143 34 19.30388085934053 24.766015870571888 24.377193553668008 31.552909716419574 35 18.26290328371979 23.064362904074876 37.661479326203605 21.011254486001725 36 42.86734093369694 25.141023401760137 21.193950462734463 10.79768520180846 37 14.335852655268758 48.74099832822835 27.4350081275975 9.488140888905388 38 14.841035634235594 46.84788582049177 20.895745837154713 17.41533270811792 39 20.264525760315294 41.97242276652343 25.723191860596035 12.039859612565246 40 30.65762640072494 22.092885263640273 23.34552726533578 23.903961070299 41 11.65961828590764 22.392124476696527 27.451135520613544 38.49712171678228 42 14.978635768610252 18.669374445811044 25.46131951286753 40.89067027271117 43 16.809916460104176 18.943053262389036 29.805613184782803 34.441417092723995 44 10.287511859719675 30.703695972472673 37.47196724374333 21.53682492406432 45 9.67400148615448 58.47111097046132 18.988757685615642 12.866129857768566 46 17.254423926478562 45.4564873807714 22.360843420054078 14.928245272695959 47 17.001071710909482 28.762444718035358 24.617278706303132 29.61920486475203 48 17.50996703317435 26.095217345528482 42.331424620869335 14.063391000427833 49 22.75672527503291 25.687103015092198 40.59867317199043 10.957498537884463 50 18.324674241875595 48.34128241377778 21.6394316584985 11.694611685848121 51 15.735892943322256 41.59863239707224 23.038924223770316 19.62655043583519 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1978.0 1 2447.5 2 2917.0 3 6629.5 4 10342.0 5 8614.0 6 6886.0 7 7358.0 8 7830.0 9 8441.5 10 9053.0 11 9152.0 12 9251.0 13 8848.5 14 8446.0 15 7807.5 16 7169.0 17 6529.0 18 5889.0 19 6437.5 20 6986.0 21 6395.5 22 5805.0 23 6663.5 24 7522.0 25 8118.0 26 10454.0 27 12194.0 28 19410.5 29 26627.0 30 32092.0 31 37557.0 32 44657.5 33 51758.0 34 55930.5 35 60103.0 36 66691.5 37 73280.0 38 82721.0 39 92162.0 40 144639.5 41 197117.0 42 232915.5 43 268714.0 44 268790.5 45 268867.0 46 220976.0 47 173085.0 48 139951.5 49 106818.0 50 91045.5 51 75273.0 52 57427.0 53 39581.0 54 28775.0 55 17969.0 56 14866.0 57 11763.0 58 10169.5 59 8576.0 60 7828.0 61 7080.0 62 6167.0 63 5254.0 64 4343.0 65 3432.0 66 2945.5 67 2459.0 68 2094.0 69 1729.0 70 1453.5 71 1178.0 72 991.5 73 805.0 74 661.0 75 360.5 76 204.0 77 179.0 78 154.0 79 115.5 80 77.0 81 48.5 82 20.0 83 19.0 84 18.0 85 11.5 86 5.0 87 3.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1643167.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.952999399721149 #Duplication Level Percentage of deduplicated Percentage of total 1 81.36167128104368 12.166010218257556 2 7.669980643499974 2.293784319162559 3 2.5853002717071627 1.159739802328084 4 1.36034217792817 0.8136478307990114 5 0.8381848727045097 0.6266688949202941 6 0.6016944534610417 0.53982820808511 7 0.4514965216142021 0.4725859051671345 8 0.3570822968308188 0.42715610961298267 9 0.2859319967172124 0.3847986877746192 >10 2.724212933823407 8.711670833345734 >50 0.43888424155401984 4.700579378496141 >100 1.0927238689200596 44.28583740352912 >500 0.21332384600417736 19.301590157532868 >1k 0.019170594191579994 4.1161022509887975 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4838 0.29443142419486273 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2568 0.15628356703852986 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2259 0.13747841820094975 No Hit GGTTATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 2068 0.12585452361202484 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2046 0.1245156457012586 No Hit GTAGATGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAAT 1881 0.11447406137051194 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1818 0.11064000189877231 No Hit GTATAAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1649 0.1003549852206136 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01807485179534399 0.0 2 0.0 0.0 0.0 0.06797848301481225 0.0 3 0.0 0.0 0.0 0.09767722939908116 0.0 4 0.0 0.0 0.0 0.15190178478511313 0.0 5 0.0 0.0 0.0 0.26199406390220836 0.0 6 0.0 0.0 0.0 0.3837102376082285 0.0 7 0.0 0.0 0.0 0.46179116304064044 0.0 8 0.0 0.0 0.0 0.6981031142908786 0.0 9 0.0 0.0 0.0 0.8015010038541427 0.0 10 0.0 0.0 0.0 0.973120808779631 0.0 11 0.0 0.0 0.0 1.1032962565582196 0.0 12 0.0 0.0 0.0 1.215275136367758 0.0 13 0.0 0.0 0.0 1.263718173502754 0.0 14 0.0 0.0 0.0 1.2802107150399198 0.0 15 0.0 0.0 0.0 1.3070491313420973 0.0 16 0.0 0.0 0.0 1.3760622018334108 0.0 17 0.0 0.0 0.0 1.4523782427470853 0.0 18 0.0 0.0 0.0 1.6026368591871671 0.0 19 0.0 0.0 0.0 1.6513841867564283 0.0 20 0.0 0.0 0.0 1.7053653097950483 0.0 21 0.0 0.0 0.0 1.7801598985373976 0.0 22 0.0 0.0 0.0 1.8509987116343014 0.0 23 0.0 0.0 0.0 1.9389995052237539 0.0 24 0.0 0.0 0.0 2.0025353478982963 0.0 25 0.0 0.0 0.0 2.054690728331326 0.0 26 0.0 0.0 0.0 2.109463006499035 0.0 27 6.0858086853010074E-5 0.0 0.0 2.1659393110986285 0.0 28 6.0858086853010074E-5 0.0 0.0 2.223024196566752 0.0 29 6.0858086853010074E-5 0.0 0.0 2.2880206333257664 0.0 30 6.0858086853010074E-5 0.0 0.0 2.3959220213161534 0.0 31 6.0858086853010074E-5 0.0 0.0 2.4945121220180297 0.0 32 6.0858086853010074E-5 0.0 0.0 2.5788614303963016 0.0 33 6.0858086853010074E-5 0.0 0.0 2.654568890441446 0.0 34 6.0858086853010074E-5 0.0 0.0 2.73611872682448 0.0 35 6.0858086853010074E-5 0.0 0.0 2.877796353018287 0.0 36 6.0858086853010074E-5 0.0 0.0 2.97955107423652 0.0 37 6.0858086853010074E-5 0.0 0.0 3.081975234410136 0.0 38 6.0858086853010074E-5 0.0 0.0 3.1760009785980365 0.0 39 6.0858086853010074E-5 0.0 0.0 3.2719133234783806 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGA 40 6.8175723E-9 45.000004 35 ACGCGAG 30 2.1660726E-6 45.000004 1 AGTTTCG 30 2.1660726E-6 45.000004 1 CGAAATT 40 6.8175723E-9 45.000004 37 GTACAAT 20 7.034172E-4 45.000004 13 CCCTAGA 20 7.034172E-4 45.000004 44 TAGACCG 40 6.8175723E-9 45.000004 1 GGCACGA 40 6.8175723E-9 45.000004 33 ACACCGT 30 2.1660726E-6 45.000004 35 GGCGTTA 35 1.2123564E-7 45.000004 20 CGACCTT 20 7.034172E-4 45.000004 23 ATTCGGT 30 2.1660726E-6 45.000004 30 TACGGTG 35 1.2123564E-7 45.000004 4 ACCTCGT 30 2.1660726E-6 45.000004 37 CGTTATC 35 1.2123564E-7 45.000004 22 CCGTATG 60 0.0 45.000004 1 CCCGTAC 30 2.1660726E-6 45.000004 4 CCGTAGA 20 7.034172E-4 45.000004 33 TACGCGG 20 7.034172E-4 45.000004 2 CCGTAAG 80 0.0 45.000004 1 >>END_MODULE