##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545131_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1671072 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.799432340437754 31.0 31.0 33.0 28.0 33.0 2 31.120520839317518 31.0 31.0 33.0 30.0 34.0 3 31.249363282970453 31.0 31.0 34.0 28.0 34.0 4 35.13408279236322 35.0 35.0 37.0 32.0 37.0 5 35.02381584994542 35.0 35.0 37.0 32.0 37.0 6 35.09687853066774 37.0 35.0 37.0 32.0 37.0 7 35.46397821278796 35.0 35.0 37.0 35.0 37.0 8 35.53203093583041 37.0 35.0 37.0 35.0 37.0 9 37.3809219471094 39.0 37.0 39.0 35.0 39.0 10 36.84816213783727 39.0 37.0 39.0 32.0 39.0 11 36.47141415809732 38.0 35.0 39.0 32.0 39.0 12 35.222852755596406 35.0 35.0 39.0 30.0 39.0 13 34.76298208575094 35.0 33.0 39.0 29.0 39.0 14 35.441385529767715 36.0 33.0 40.0 27.0 41.0 15 35.881893179946765 36.0 34.0 40.0 30.0 41.0 16 36.090471864767046 36.0 34.0 40.0 31.0 41.0 17 35.9474636640432 36.0 34.0 40.0 31.0 41.0 18 36.02253463644894 36.0 35.0 40.0 31.0 41.0 19 35.8692462084219 36.0 35.0 40.0 31.0 41.0 20 35.58482100112981 36.0 34.0 40.0 30.0 41.0 21 35.45050183355355 35.0 34.0 40.0 30.0 41.0 22 35.27102063824898 35.0 34.0 40.0 29.0 41.0 23 35.19991538365792 35.0 34.0 40.0 29.0 41.0 24 35.268345110204706 35.0 34.0 40.0 30.0 41.0 25 35.17392129124298 35.0 34.0 39.0 30.0 41.0 26 34.92148872101262 35.0 34.0 39.0 29.0 41.0 27 34.920469016296124 35.0 34.0 39.0 29.0 41.0 28 34.99251079546543 36.0 34.0 39.0 29.0 41.0 29 34.97686036268934 36.0 34.0 39.0 29.0 41.0 30 34.93495193504529 36.0 34.0 39.0 29.0 41.0 31 34.68992060186515 35.0 34.0 39.0 28.0 41.0 32 34.517951350989065 35.0 34.0 40.0 27.0 41.0 33 34.24251917332108 35.0 33.0 40.0 25.0 41.0 34 33.98352255318741 35.0 33.0 40.0 24.0 41.0 35 33.74208950900979 35.0 33.0 40.0 23.0 41.0 36 33.48497910323433 35.0 33.0 39.0 22.0 41.0 37 33.5123070699527 35.0 33.0 39.0 23.0 41.0 38 33.534867438386854 35.0 33.0 39.0 23.0 41.0 39 33.53487342256946 35.0 33.0 39.0 23.0 41.0 40 33.22305023362249 35.0 32.0 39.0 22.0 41.0 41 33.27837280500182 35.0 32.0 39.0 23.0 41.0 42 33.25572387066506 35.0 32.0 39.0 23.0 41.0 43 33.20944579288026 35.0 32.0 39.0 23.0 41.0 44 33.185179333984415 35.0 32.0 39.0 23.0 41.0 45 33.265876036460426 35.0 32.0 39.0 23.0 41.0 46 33.271674110989835 35.0 33.0 39.0 23.0 41.0 47 33.18782793320695 35.0 32.0 39.0 23.0 41.0 48 33.24854344995308 35.0 32.0 39.0 23.0 41.0 49 33.28039486030524 35.0 32.0 39.0 23.0 41.0 50 33.04822951973344 35.0 32.0 39.0 22.0 41.0 51 32.70731303019858 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 1.0 12 2.0 13 4.0 14 23.0 15 52.0 16 152.0 17 463.0 18 1127.0 19 2314.0 20 4180.0 21 6540.0 22 9825.0 23 14015.0 24 20167.0 25 28083.0 26 35682.0 27 40901.0 28 43319.0 29 47737.0 30 56510.0 31 69147.0 32 85699.0 33 113331.0 34 197926.0 35 287248.0 36 97109.0 37 117177.0 38 166389.0 39 225859.0 40 86.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.724050190536374 24.91412697956761 29.596271136132973 14.765551693763046 2 30.358117424024815 26.42507324639513 31.679065893031538 11.537743436548514 3 26.695797667604985 26.066321499013807 34.98131738189617 12.256563451485034 4 23.266322456483024 28.04164033626319 35.01069971850405 13.681337488749737 5 21.232538155148312 31.45579603990732 33.989439114532466 13.322226690411904 6 18.40136152122709 41.77731420309837 30.57061574845369 9.25070852722085 7 85.93459767143486 4.048598743800387 8.730563374887497 1.2862402098772525 8 88.32097001206411 2.6021619654928094 7.642279925700389 1.4345880967426898 9 84.75284128990252 3.941003140499033 9.287271882958963 2.0188836866394744 10 56.116014151395035 22.2911999004232 14.567594933072902 7.025191015108864 11 50.56113680320178 15.962866950077556 22.967891269795675 10.508104976924992 12 48.174704620746446 19.93726182953218 22.53421755615557 9.353815993565808 13 17.76781610846211 49.71299860209494 20.982159954807454 11.53702533463549 14 9.8481693188564 50.06115834625917 26.348834759962468 13.741837574921966 15 9.013196319488328 23.45709819804293 54.99224449933935 12.537460983129392 16 8.642117155933436 17.53628808333812 54.877946611516435 18.943648149212002 17 9.558115987820992 17.537903812642426 34.022950537140225 38.88102966239636 18 14.36425240803508 21.518582083836005 44.63805269910572 19.47911280902319 19 30.037245552555486 20.508751268646712 28.70899638076636 20.745006798031444 20 31.34616581451906 19.91541956301105 30.840741751402696 17.897672871067194 21 14.997199402539207 34.26985791156814 31.082263361482926 19.65067932440972 22 17.15665153865303 26.24225646770456 22.016884969648228 34.58420702399418 23 12.448176978610137 35.518637138316 25.477298404856285 26.555887478217578 24 11.030524118649586 20.066699699354665 55.65750607992953 13.245270102066216 25 9.843142605465234 25.671604814155224 46.770097278872484 17.715155301507057 26 9.870011585377531 38.7128142892706 32.75795417552326 18.65921994982861 27 8.468695543938262 47.294969935466575 27.171121292200457 17.065213228394708 28 8.284801612378162 31.953620191110854 43.36820914957584 16.393369046935142 29 8.568152658892018 22.219329867294764 44.71842027153827 24.494097202274947 30 14.148941517780203 40.11371143792727 31.089205013308824 14.648142030983704 31 29.81044503169223 30.49024817602114 26.492694509871505 13.20661228241512 32 33.51315802071964 20.930516458895845 29.754074031519888 15.802251488864632 33 33.805964075754964 26.912544761685915 21.436598782099157 17.844892380459967 34 18.957890503820302 24.166223837153638 25.88583855154057 30.990047107485495 35 18.309983052794855 22.915409988318874 36.91654219566841 21.858064763217865 36 35.27998793588786 27.210257846460234 24.047796863330845 13.461957354321058 37 15.694177150954596 43.63570211217709 28.7657862737213 11.90433446314701 38 16.43112923919496 40.76287556730051 26.856353286991823 15.949641906512705 39 18.804097010781103 40.932467302426225 26.415438712395396 13.847996974397272 40 27.880007564006814 23.85785890733613 26.00211121962429 22.260022309032763 41 14.008373068305854 21.93867170295475 30.01294977116486 34.04000545757454 42 14.357490281687443 19.772996016928055 28.517323011815172 37.35219068956933 43 15.171997376534344 21.547126634878687 29.277374044924454 34.00350194366251 44 11.433738342812278 28.8788873250225 35.764587043526554 23.92278728863867 45 10.54789979127171 48.67210987916739 22.460013691809806 18.319976637751097 46 16.188530476245187 42.191180272304244 24.758179180789337 16.86211007066123 47 15.718831983301737 28.394108691905558 28.490094980946363 27.396964343846346 48 16.214621512418375 24.464595182014897 41.030727580858276 18.290055724708452 49 20.97838991976408 26.51453677639264 38.7274755366615 13.779597767181784 50 17.737057409854273 41.74110989831677 27.249932977154785 13.271899714674174 51 14.289629650906724 38.486013768407346 26.251352425269523 20.9730041554164 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2252.0 1 3147.0 2 4042.0 3 10178.0 4 16314.0 5 12460.0 6 8606.0 7 8852.0 8 9098.0 9 9573.0 10 10048.0 11 10240.5 12 10433.0 13 10454.0 14 10475.0 15 10511.0 16 10547.0 17 10003.5 18 9460.0 19 9219.5 20 8979.0 21 7981.5 22 6984.0 23 7662.5 24 8341.0 25 10219.0 26 16166.0 27 20235.0 28 23508.5 29 26782.0 30 32301.0 31 37820.0 32 48157.0 33 58494.0 34 65526.0 35 72558.0 36 73245.5 37 73933.0 38 87697.0 39 101461.0 40 140460.0 41 179459.0 42 209828.5 43 240198.0 44 228112.5 45 216027.0 46 187834.5 47 159642.0 48 134230.0 49 108818.0 50 90967.5 51 73117.0 52 61495.5 53 49874.0 54 44433.5 55 38993.0 56 33943.0 57 28893.0 58 23496.5 59 18100.0 60 14763.0 61 11426.0 62 9924.0 63 8422.0 64 7214.0 65 6006.0 66 5137.0 67 4268.0 68 3692.5 69 3117.0 70 2689.5 71 2262.0 72 1933.5 73 1605.0 74 1286.5 75 732.0 76 496.0 77 353.5 78 211.0 79 168.0 80 125.0 81 84.0 82 43.0 83 31.5 84 20.0 85 17.5 86 15.0 87 9.5 88 4.0 89 3.0 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1671072.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.043564671240432 #Duplication Level Percentage of deduplicated Percentage of total 1 80.34308056400633 15.300186506073347 2 7.222028015922718 2.75066315157469 3 2.7481686786516857 1.5700478387814223 4 1.503993142089961 1.145655626659691 5 1.0640744975654612 1.0131885754702763 6 0.7738512807932167 0.8842132147024718 7 0.6117553579577075 0.815500190557181 8 0.48937786399171607 0.7455599201279799 9 0.4105638189011033 0.7036738773223143 >10 3.2657369604662896 12.166754500803737 >50 0.43303094433799355 5.8912247481781925 >100 1.0813146874880648 49.37460551969943 >500 0.047974265177517725 5.990818487584849 >1k 0.0047343024846234595 1.139897590266541 >5k 3.15620165641564E-4 0.5080102521978804 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8452 0.5057831140728826 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0290831274774516 0.0 2 0.0 0.0 0.0 0.10717671051875682 0.0 3 0.0 0.0 0.0 0.14930535608280193 0.0 4 0.0 0.0 0.0 0.22596273529806016 0.0 5 0.0 0.0 0.0 0.4068047337278107 0.0 6 0.0 0.0 0.0 0.6075740602439632 0.0 7 0.0 0.0 0.0 0.7614872369353325 0.0 8 0.0 0.0 0.0 1.152852779533138 0.0 9 0.0 0.0 0.0 1.3258554987457154 0.0 10 0.0 0.0 0.0 1.552536335956799 0.0 11 0.0 0.0 0.0 1.7245815859520117 0.0 12 0.0 0.0 0.0 1.895130790295092 0.0 13 0.0 0.0 0.0 1.9594607533367803 0.0 14 0.0 0.0 0.0 1.992313915857605 0.0 15 0.0 0.0 0.0 2.029056797073974 0.0 16 0.0 0.0 0.0 2.108646425767412 0.0 17 0.0 0.0 0.0 2.2061287604603512 0.0 18 0.0 0.0 0.0 2.370394573064476 0.0 19 0.0 0.0 0.0 2.433826908714885 0.0 20 5.984182608529136E-5 0.0 0.0 2.5037820034085905 0.0 21 5.984182608529136E-5 0.0 0.0 2.598391930449436 0.0 22 5.984182608529136E-5 0.0 0.0 2.707244212098581 0.0 23 5.984182608529136E-5 0.0 0.0 2.8332710978342046 0.0 24 5.984182608529136E-5 0.0 0.0 2.936677773309588 0.0 25 5.984182608529136E-5 0.0 0.0 3.0234484211332604 0.0 26 5.984182608529136E-5 0.0 0.0 3.113630053043795 0.0 27 5.984182608529136E-5 0.0 0.0 3.200161333563126 0.0 28 5.984182608529136E-5 0.0 0.0 3.2878296087780776 0.0 29 5.984182608529136E-5 0.0 0.0 3.3890221366883053 0.0 30 5.984182608529136E-5 0.0 0.0 3.534138564945137 0.0 31 5.984182608529136E-5 0.0 0.0 3.6562158901591313 0.0 32 5.984182608529136E-5 0.0 0.0 3.7563911070259093 0.0 33 5.984182608529136E-5 0.0 0.0 3.875296815457383 0.0 34 5.984182608529136E-5 0.0 0.0 4.012334597192701 0.0 35 5.984182608529136E-5 0.0 0.0 4.205683537274276 0.0 36 5.984182608529136E-5 0.0 0.0 4.352834587618008 0.0 37 5.984182608529136E-5 0.0 0.0 4.485563757875184 0.0 38 5.984182608529136E-5 0.0 0.0 4.629124298653799 0.0 39 5.984182608529136E-5 0.0 0.0 4.792432642040558 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTG 25 3.891569E-5 45.0 1 ATCTCGC 40 6.8175723E-9 45.0 19 TCGTTAG 75 0.0 45.0 1 ACGTTCA 20 7.034207E-4 45.0 36 CTATCGC 25 3.891569E-5 45.0 44 GCGAACG 20 7.034207E-4 45.0 1 CGGTTGA 20 7.034207E-4 45.0 25 CCGGATA 20 7.034207E-4 45.0 20 GCCGGAT 20 7.034207E-4 45.0 19 CGACCCG 140 0.0 45.0 32 CAATTCG 25 3.891569E-5 45.0 11 CTAAGCG 70 0.0 45.0 1 TAGCACG 45 3.8562575E-10 45.0 1 TACGATA 40 6.8175723E-9 45.0 23 ATATACG 95 0.0 45.0 1 CGTAGCT 25 3.891569E-5 45.0 13 TCGCTAA 40 6.8175723E-9 45.0 22 ACGCTAA 25 3.891569E-5 45.0 25 TTACGTC 20 7.034207E-4 45.0 26 TGTAGCG 20 7.034207E-4 45.0 1 >>END_MODULE