SRR1545128_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545128_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1921811
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6691	0.34816118754653813	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	2986	0.15537427978089416	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	2635	0.13711025693993845	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2187	0.11379891154749348	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	2051	0.10672225312478698	No Hit
ATTGTAGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGC	1934	0.10063424551113506	No Hit

Adapter graph

$Kmer graph$

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGATG	125	0.0	45.000004	1
TATTGCG	75	0.0	45.000004	1
TTGCGAG	75	0.0	45.000004	1
TTACCCG	75	0.0	45.000004	45
TATCCGA	75	0.0	45.000004	30
AACGTGC	20	7.034472E-4	45.0	44
CGGGTGC	50	2.1827873E-11	45.0	6
AACGTAG	20	7.034472E-4	45.0	1
TACCCGG	35	1.212502E-7	45.0	2
TACCCGC	40	6.8193913E-9	45.0	45
CGAACGG	100	0.0	45.0	2
CACGGTA	20	7.034472E-4	45.0	30
GTCGAAG	45	3.8562575E-10	45.0	1
ACGTTAC	20	7.034472E-4	45.0	45
GCGAAAG	70	0.0	45.0	1
TCCGAAC	50	2.1827873E-11	45.0	39
GCAACCG	20	7.034472E-4	45.0	30
ATTACGT	55	1.8189894E-12	45.0	31
ATTACGC	20	7.034472E-4	45.0	33
TTACTCG	25	3.8917886E-5	45.0	20