##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545126_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2192489 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.830509069828857 31.0 31.0 33.0 28.0 33.0 2 31.143481221570553 31.0 31.0 33.0 30.0 34.0 3 31.257841658498627 31.0 31.0 34.0 28.0 34.0 4 35.14862104211241 35.0 35.0 37.0 32.0 37.0 5 35.04296897270636 35.0 35.0 37.0 32.0 37.0 6 35.12699721640565 37.0 35.0 37.0 32.0 37.0 7 35.508653407155066 36.0 35.0 37.0 35.0 37.0 8 35.58410007986357 37.0 35.0 37.0 35.0 37.0 9 37.40166814976039 39.0 37.0 39.0 35.0 39.0 10 36.85992449677057 39.0 37.0 39.0 32.0 39.0 11 36.48428658022914 38.0 35.0 39.0 32.0 39.0 12 35.55324108809668 37.0 35.0 39.0 31.0 39.0 13 35.21743871919084 37.0 35.0 39.0 30.0 39.0 14 36.000417790009436 38.0 35.0 40.0 30.0 41.0 15 36.31773067048455 38.0 35.0 40.0 31.0 41.0 16 36.423954692589106 38.0 35.0 40.0 32.0 41.0 17 36.25769479345164 37.0 35.0 40.0 31.0 41.0 18 36.31660364088486 37.0 35.0 40.0 31.0 41.0 19 36.167230029432304 37.0 35.0 40.0 31.0 41.0 20 35.93230844031601 36.0 34.0 40.0 31.0 41.0 21 35.84478599436531 36.0 34.0 40.0 30.0 41.0 22 35.65726167839382 36.0 34.0 40.0 30.0 41.0 23 35.55480643232418 36.0 34.0 40.0 30.0 41.0 24 35.636670469042265 36.0 34.0 40.0 30.0 41.0 25 35.52956708106631 35.0 34.0 40.0 30.0 41.0 26 35.25834793241836 35.0 34.0 40.0 29.0 41.0 27 35.27882739662548 35.0 34.0 40.0 29.0 41.0 28 35.30269068624746 36.0 34.0 40.0 29.0 41.0 29 35.26047838780491 36.0 34.0 40.0 29.0 41.0 30 35.23382466229021 36.0 34.0 40.0 29.0 41.0 31 35.06785347611778 36.0 34.0 40.0 29.0 41.0 32 34.934272418242465 35.0 34.0 40.0 28.0 41.0 33 34.67216528794443 35.0 33.0 40.0 27.0 41.0 34 34.39490962098328 35.0 34.0 40.0 25.0 41.0 35 34.181636943218415 35.0 33.0 40.0 24.0 41.0 36 33.92115353828457 35.0 33.0 40.0 23.0 41.0 37 33.94862368750767 35.0 33.0 40.0 23.0 41.0 38 33.979297501606624 35.0 33.0 40.0 23.0 41.0 39 33.97299188274149 35.0 33.0 40.0 23.0 41.0 40 33.7039529046668 35.0 33.0 40.0 23.0 41.0 41 33.738823775170594 35.0 33.0 40.0 23.0 41.0 42 33.7095720890732 35.0 33.0 40.0 23.0 41.0 43 33.66144277120661 35.0 33.0 40.0 23.0 41.0 44 33.620128538843296 35.0 33.0 40.0 23.0 41.0 45 33.66840882668055 35.0 33.0 40.0 23.0 41.0 46 33.64677542281854 35.0 33.0 40.0 23.0 41.0 47 33.582935193745556 35.0 33.0 40.0 23.0 41.0 48 33.64899025719171 35.0 33.0 40.0 23.0 41.0 49 33.63337877635874 36.0 33.0 39.0 23.0 41.0 50 33.49465835404419 35.0 33.0 39.0 23.0 41.0 51 33.182869332525726 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 1.0 11 3.0 12 5.0 13 9.0 14 17.0 15 55.0 16 179.0 17 538.0 18 1394.0 19 2692.0 20 4794.0 21 7883.0 22 11833.0 23 17286.0 24 24474.0 25 34076.0 26 43367.0 27 49129.0 28 52592.0 29 59168.0 30 69432.0 31 84776.0 32 106192.0 33 139664.0 34 235434.0 35 330859.0 36 144403.0 37 177789.0 38 251786.0 39 342555.0 40 101.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.30565808996077 23.4730026011533 29.339941956379256 14.881397352506673 2 31.211650320708568 26.314202716638484 30.485033220235085 11.989113742417864 3 27.197536680913792 25.857096660462155 35.07096272774915 11.874403930874909 4 25.08122047590661 27.766615932850748 33.75788886512087 13.394274726121774 5 21.22555688990914 32.31313817309916 34.18384311164161 12.277461825350093 6 18.960596837658024 41.508030370961954 30.44485057849777 9.086522212882254 7 86.18606524365686 4.176623007002544 8.25249294295205 1.3848188063885385 8 88.24386348118509 2.8648262317393614 7.729023954054045 1.1622863330215112 9 83.55677041025064 5.242078751592368 9.23279432644816 1.9683565117088389 10 49.37995127911702 27.763605655490174 15.179870913833545 7.676572151559255 11 44.73244791650038 18.20072985542915 26.281682599091717 10.785139628978754 12 43.99661754289303 21.290460294213563 25.078301419072112 9.63462074382129 13 18.639728637179022 46.56096336173181 22.559885135113564 12.23942286597561 14 11.084571005829448 45.88173532455579 26.624306895040295 16.409386774574468 15 9.69715241444769 25.504985429801476 50.919434487470625 13.878427668280205 16 10.400417060245228 19.643929798507543 48.761658553361045 21.193994587886188 17 10.739392535150689 21.4857178302833 31.87354645792978 35.90134317663624 18 15.86169873600278 23.946665182812776 41.93735977694757 18.254276304236875 19 27.418427184811417 24.555744635434888 27.93988932213571 20.085938857617986 20 28.81277853617509 21.942230953040127 32.47710706872417 16.7678834420606 21 16.059464836539657 33.28969951502607 31.38127488895041 19.269560759483856 22 19.857887542423246 25.99835164509377 23.42889747679464 30.714863335688342 23 13.869031954094183 32.445453546175145 27.323785889005602 26.36172861072507 24 11.28397907583573 22.195732795010603 52.976457350527184 13.543830778626484 25 11.380855274530454 29.10071612673997 42.78616677210239 16.73226182662718 26 12.506197294490418 38.083703042523815 29.819989974864185 19.590109688121583 27 10.69031589212078 44.878035876120705 27.837813553454545 16.593834678303974 28 10.519231795461687 33.41084037365752 39.83039367586337 16.239534155017427 29 10.730863415962407 24.38566396456265 39.24858916053855 25.634883458936397 30 13.697126872700387 40.60093345964336 30.43495315141832 15.266986516237937 31 26.432743790276714 32.62990144990465 27.601506780649753 13.33584797916888 32 29.211731506976772 24.167327635395207 30.372512701318 16.24842815631002 33 29.387695901781036 30.21565900672706 22.79277113819043 17.603873953301477 34 17.266950940232768 27.171037118088165 27.162462388636843 28.399549553042224 35 19.54769214349536 26.307224346393525 33.514330060492895 20.63075344961822 36 31.204717560726646 30.2631392905506 24.03492104179314 14.497222106929614 37 15.023290880820838 41.794918925476935 30.45105357427107 12.730736619431157 38 15.133211614744704 38.129769408193155 29.89433470361767 16.842684273444473 39 18.28998914019637 39.226741844542886 28.403608866452696 14.079660148808044 40 24.55998638989751 27.482692045433293 28.26714295944016 19.690178605229033 41 13.660091339112762 26.250257127857886 31.38018024263748 28.709471290391882 42 15.284181585403623 23.576401067462598 28.26103118419294 32.87838616294084 43 16.144619197633375 25.497550956926123 30.89402044890533 27.463809396535172 44 12.872219655377975 31.579588312643757 33.0291736925476 22.519018339430666 45 12.076229344822256 48.63317444238033 23.08412949848323 16.20646671431419 46 16.904714231177444 41.27245336236579 25.827632430538987 15.995199975917782 47 15.701013779316566 32.009875534153196 28.220529270614357 24.068581415915887 48 16.378326185444944 28.793531005172664 38.00005382011039 16.82808898927201 49 19.937659892478365 29.713991723561666 36.160546301486576 14.18780208247339 50 17.706725096454303 40.675916732079386 27.39197323224883 14.225384939217484 51 15.389997395653982 34.74494056754674 28.29993673856516 21.565125298234108 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2139.0 1 3123.5 2 4108.0 3 13652.5 4 23197.0 5 18138.0 6 13079.0 7 13455.5 8 13832.0 9 14491.5 10 15151.0 11 15223.5 12 15296.0 13 14680.5 14 14065.0 15 13179.0 16 12293.0 17 11318.0 18 10343.0 19 10392.5 20 10442.0 21 9699.0 22 8956.0 23 10627.0 24 12298.0 25 15262.5 26 23346.5 27 28466.0 28 37440.0 29 46414.0 30 56777.0 31 67140.0 32 78043.0 33 88946.0 34 109125.0 35 129304.0 36 132510.5 37 135717.0 38 144448.0 39 153179.0 40 185973.5 41 218768.0 42 242837.5 43 266907.0 44 264906.0 45 262905.0 46 232191.5 47 201478.0 48 166796.5 49 132115.0 50 113264.5 51 94414.0 52 76437.0 53 58460.0 54 46011.5 55 33563.0 56 28195.5 57 22828.0 58 21295.0 59 19762.0 60 18277.5 61 16793.0 62 14740.0 63 12687.0 64 10841.5 65 8996.0 66 7216.5 67 5437.0 68 5171.5 69 4906.0 70 4380.0 71 3854.0 72 3330.0 73 2806.0 74 2174.0 75 1121.0 76 700.0 77 579.0 78 458.0 79 359.0 80 260.0 81 200.0 82 140.0 83 107.0 84 74.0 85 47.0 86 20.0 87 14.0 88 8.0 89 7.5 90 7.0 91 6.5 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2192489.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.553997154472473 #Duplication Level Percentage of deduplicated Percentage of total 1 79.89653196052986 14.824000266478901 2 7.269333355445526 2.697503807836963 3 2.7342533013291828 1.521939839174059 4 1.559302380890348 1.1572516775200667 5 1.0384892541033188 0.9634063332791611 6 0.7748942827979836 0.8626431790830466 7 0.5982239313818708 0.7769611584417597 8 0.491797081379946 0.7299841318801108 9 0.4305599356765266 0.7189747039234913 >10 3.5209004523643928 13.24519882523031 >50 0.5631432881506503 7.531163784745895 >100 1.0703237936438652 47.660168561517466 >500 0.04756446974128022 5.517065755273457 >1k 0.004436064535456186 1.21493876853521 >5k 0.0 0.0 >10k+ 2.464480297475659E-4 0.5787992070801162 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12658 0.5773347095470035 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3052 0.13920252279486922 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2758 0.1257931054614185 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01979485415890342 0.0 2 0.0 0.0 0.0 0.07060468718429146 0.0 3 0.0 0.0 0.0 0.10481238446350244 0.0 4 0.0 0.0 0.0 0.15671686380182523 0.0 5 0.0 0.0 0.0 0.2721108292903636 0.0 6 0.0 0.0 0.0 0.40980821340494755 0.0 7 0.0 0.0 0.0 0.5074597865713352 0.0 8 0.0 0.0 0.0 0.7797986671768935 0.0 9 0.0 0.0 0.0 0.8970170431869897 0.0 10 0.0 0.0 0.0 1.0870750092702859 0.0 11 0.0 0.0 0.0 1.2309753891581667 0.0 12 0.0 0.0 0.0 1.3616031825017139 0.0 13 0.0 0.0 0.0 1.4138725439443482 0.0 14 0.0 0.0 0.0 1.4326183620533557 0.0 15 0.0 0.0 0.0 1.4619457611873994 0.0 16 0.0 0.0 0.0 1.5328241099499245 0.0 17 0.0 0.0 0.0 1.6215360715606784 0.0 18 0.0 0.0 0.0 1.7572722143645874 0.0 19 0.0 0.0 0.0 1.8188004592041283 0.0 20 0.0 0.0 0.0 1.8809672477262143 0.0 21 0.0 0.0 0.0 1.966349660135125 0.0 22 0.0 0.0 0.0 2.0616751098865262 0.0 23 0.0 0.0 0.0 2.1772059061641813 0.0 24 0.0 0.0 0.0 2.270433283815791 0.0 25 0.0 0.0 0.0 2.3410835812631214 0.0 26 0.0 0.0 0.0 2.4166141768556195 0.0 27 0.0 0.0 0.0 2.4919167211329225 0.0 28 0.0 0.0 0.0 2.5725556661857825 0.0 29 0.0 0.0 0.0 2.66847404935669 0.0 30 0.0 0.0 0.0 2.8172547273897384 0.0 31 0.0 0.0 0.0 2.932466251826121 0.0 32 0.0 0.0 0.0 3.037324246552662 0.0 33 0.0 0.0 0.0 3.1451012981136963 0.0 34 0.0 0.0 0.0 3.261316248336936 0.0 35 0.0 0.0 0.0 3.4218643742340324 0.0 36 0.0 0.0 0.0 3.5448296433870365 0.0 37 0.0 0.0 0.0 3.6692088306942474 0.0 38 4.561026303894797E-5 0.0 0.0 3.79700878772938 0.0 39 4.561026303894797E-5 0.0 0.0 3.9258121705513687 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGTC 30 2.1664073E-6 45.000004 18 CGTTAAG 45 3.8562575E-10 45.000004 18 CTTACCG 30 2.1664073E-6 45.000004 1 ATCTCGC 75 0.0 45.0 15 ACCGGTA 20 7.034689E-4 45.0 35 ACGGGTC 25 3.891969E-5 45.0 5 TGATTCG 35 1.2126111E-7 45.0 15 GCGATTC 85 0.0 45.0 9 TTACGCA 35 1.2126111E-7 45.0 13 TCGAACA 35 1.2126111E-7 45.0 43 TACGTAG 50 2.1827873E-11 45.0 1 CTAGCGA 40 6.8193913E-9 45.0 17 TAATCCG 20 7.034689E-4 45.0 24 ACTTACG 65 0.0 44.999996 1 TAATGCG 145 0.0 43.44828 1 CGTTTTT 10555 0.0 43.401234 1 TACGGGA 650 0.0 42.923077 4 CGACGGT 180 0.0 42.500004 28 CGGTCTA 180 0.0 42.500004 31 TTGCGAG 490 0.0 42.2449 1 >>END_MODULE