##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545122_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2221889 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.92810261898772 31.0 31.0 33.0 30.0 33.0 2 31.254379944272642 31.0 31.0 33.0 30.0 34.0 3 31.408895313852312 31.0 31.0 34.0 30.0 34.0 4 35.22376770396721 37.0 35.0 37.0 33.0 37.0 5 35.10687887648753 37.0 35.0 37.0 32.0 37.0 6 35.18398803900645 37.0 35.0 37.0 32.0 37.0 7 35.59628541299768 36.0 35.0 37.0 35.0 37.0 8 35.67175542972669 37.0 35.0 37.0 35.0 37.0 9 37.491840501483196 39.0 37.0 39.0 35.0 39.0 10 37.02273695940706 39.0 37.0 39.0 33.0 39.0 11 36.57756575598511 39.0 35.0 39.0 32.0 39.0 12 35.14262323635429 35.0 35.0 39.0 31.0 39.0 13 34.642821491082586 35.0 33.0 39.0 30.0 39.0 14 35.25400773846038 35.0 33.0 40.0 27.0 41.0 15 35.70890760069472 35.0 34.0 40.0 30.0 41.0 16 35.93845057066307 35.0 34.0 40.0 32.0 41.0 17 35.79315888417468 35.0 34.0 40.0 31.0 41.0 18 35.906427818851434 36.0 35.0 40.0 31.0 41.0 19 35.78666125985592 36.0 35.0 40.0 31.0 41.0 20 35.50717565098886 35.0 34.0 40.0 31.0 41.0 21 35.35544799942751 35.0 34.0 40.0 30.0 41.0 22 35.19758457780744 35.0 34.0 40.0 30.0 41.0 23 35.13983641847095 35.0 34.0 39.0 30.0 41.0 24 35.22449636322967 35.0 34.0 39.0 30.0 41.0 25 35.12873685409127 35.0 34.0 39.0 30.0 41.0 26 34.882397815552444 35.0 34.0 39.0 29.0 41.0 27 34.86991249337838 35.0 34.0 39.0 29.0 41.0 28 34.98584222704194 35.0 34.0 39.0 29.0 41.0 29 34.98746967107718 36.0 34.0 39.0 29.0 41.0 30 34.94652073078358 36.0 34.0 39.0 29.0 41.0 31 34.686801635905304 35.0 34.0 39.0 29.0 41.0 32 34.53191361044588 35.0 34.0 39.0 29.0 41.0 33 34.29091147217525 35.0 33.0 39.0 27.0 41.0 34 34.10419242365393 35.0 34.0 39.0 26.0 41.0 35 33.86593569705777 35.0 33.0 39.0 24.0 41.0 36 33.57866437072239 35.0 33.0 39.0 23.0 41.0 37 33.56767687314713 35.0 33.0 39.0 23.0 41.0 38 33.62417474500301 35.0 33.0 39.0 23.0 41.0 39 33.65717639360022 35.0 33.0 39.0 23.0 41.0 40 33.2741469083289 35.0 32.0 39.0 23.0 41.0 41 33.408505105340545 35.0 33.0 39.0 23.0 41.0 42 33.39893261994636 35.0 33.0 39.0 23.0 41.0 43 33.34305539115591 35.0 33.0 39.0 23.0 41.0 44 33.30045200277782 35.0 33.0 39.0 23.0 41.0 45 33.36461722435279 35.0 33.0 39.0 23.0 41.0 46 33.389074791765026 35.0 33.0 39.0 23.0 41.0 47 33.3633192297185 35.0 33.0 39.0 23.0 41.0 48 33.409030784166085 35.0 33.0 39.0 23.0 41.0 49 33.42826216791208 35.0 33.0 38.0 24.0 41.0 50 33.19962158325641 35.0 32.0 38.0 23.0 41.0 51 32.91135740804334 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 3.0 12 4.0 13 2.0 14 10.0 15 45.0 16 159.0 17 518.0 18 1266.0 19 2692.0 20 4692.0 21 7737.0 22 11813.0 23 17069.0 24 24240.0 25 33368.0 26 42705.0 27 49655.0 28 54271.0 29 61788.0 30 73350.0 31 91286.0 32 116299.0 33 155794.0 34 289941.0 35 425080.0 36 119229.0 37 144437.0 38 207194.0 39 287094.0 40 146.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.205969335101795 25.67545003373256 30.081205676791235 13.037374954374409 2 29.500348577269165 26.569374077642944 31.008704755278053 12.921572589809843 3 28.68788674861796 25.42323221367044 32.93004285992684 12.95883817778476 4 25.886351658431185 28.925747415825004 31.62151664642113 13.566384279322685 5 21.764768627055627 33.50567917659253 31.630472989424764 13.099079206927078 6 19.90792519338275 42.201163064401506 28.715565899106572 9.175345843109174 7 85.62695976261641 5.329114100659394 7.5256684739876745 1.5182576627365274 8 88.1826229843165 3.600809941450721 6.733909749766978 1.4826573244658037 9 83.51893366410293 5.590063229981336 8.535709929703959 2.355293176211773 10 60.908083167070906 19.34579090134566 12.974050458866307 6.772075472717135 11 58.08665509393134 15.894763419774796 18.23254897071816 7.786032515575711 12 52.58674038172024 20.32441764642608 19.760033016950892 7.328808954902788 13 18.083981693054874 54.19712685917253 18.926688056874127 8.792203390898464 14 9.517532153946483 55.412804149982286 24.653076728855492 10.416586967215734 15 8.766504537355377 22.862798276601577 59.21997003450667 9.150727151536373 16 9.033754611503996 16.309635629862697 58.16874740367318 16.487862354960125 17 8.853457575963516 17.031993947492428 31.422721837139477 42.69182663940458 18 14.789442676929406 23.350626426432644 45.705208496013974 16.154722400623974 19 33.29387741691867 19.14978651048725 29.10442420841005 18.451911864184034 20 33.07811506335375 20.274910222787906 29.351196211871972 17.295778501986373 21 15.810825833333709 35.24802544141494 31.543699977811674 17.39744874743968 22 18.690627659617558 25.589532150345946 20.857927646250555 34.86191254378594 23 12.255652735127633 34.58120545175749 25.202429104244185 27.960712708870695 24 10.191733250400898 21.271764701116933 56.03853297802005 12.497969070462116 25 8.974435716635709 25.319086597035223 50.2518802694464 15.454597416882661 26 9.10765569297116 41.67084854373913 30.884846182685095 18.33664958060461 27 9.34097067855325 51.664147038848476 26.89418778345813 12.100694499140147 28 8.490883207937031 36.60151339693387 42.753845939198584 12.153757455930517 29 8.938160277133555 26.119351596771935 42.05039045604889 22.892097670045626 30 13.834219441205208 42.543079334746245 30.231033143419854 13.39166808062869 31 32.40625431783496 31.362367787049667 26.16363823755372 10.067739657561651 32 36.32773734421477 22.141340093947086 30.200563574508 11.33035898733015 33 37.32369168756855 27.29713320512411 20.4054748009464 14.973700306360938 34 20.35056656745679 26.4786404721388 24.359407693183595 28.811385267220817 35 18.566048979044407 24.73404386987829 36.00202350342434 20.697883647652965 36 39.23094267985485 25.6081649443334 23.490237361092294 11.670655014719458 37 15.958988050258135 45.433367733491636 28.23358862661456 10.374055589635665 38 16.449651625261207 43.588046027501825 23.019871829780875 16.942430517456092 39 20.057437612770034 41.17523422637224 26.575404981977048 12.191923178880673 40 27.990777217043693 24.464858505532906 25.61649119285437 21.92787308456903 41 12.886962400011882 25.26548355925971 27.276520114191122 34.57103392653729 42 16.05899304600725 21.270459505402837 26.076100111211677 36.59444733737824 43 17.137579780088025 20.559307868214837 30.085346297677333 32.217766054019805 44 11.274685639111585 31.209569875002757 36.300778301706345 21.214966184179318 45 10.625328267973783 53.231462057735556 22.324742595152145 13.818467079138516 46 17.158507918262345 43.225066598736475 25.023347250920274 14.5930782320809 47 17.74062520674975 30.17058907983252 25.50568457740238 26.583101136015348 48 18.048921435769294 27.51046519425588 39.0988928789872 15.341720490987623 49 21.904919642700424 26.69444783245248 38.93331305029189 12.46731947455521 50 18.36941449370333 45.640308764299206 24.182036096312643 11.808240645684819 51 16.65569252109354 39.96693804235945 24.32907314451802 19.04829629202899 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3937.0 1 4614.5 2 5292.0 3 10522.0 4 15752.0 5 13088.5 6 10425.0 7 11087.0 8 11749.0 9 12596.5 10 13444.0 11 13661.0 12 13878.0 13 13232.5 14 12587.0 15 11751.0 16 10915.0 17 10532.0 18 10149.0 19 9632.5 20 9116.0 21 9714.5 22 10313.0 23 12291.0 24 14269.0 25 16876.5 26 22589.0 27 25694.0 28 37145.0 29 48596.0 30 53660.5 31 58725.0 32 67300.0 33 75875.0 34 81862.0 35 87849.0 36 93960.5 37 100072.0 38 116055.5 39 132039.0 40 184910.0 41 237781.0 42 292911.5 43 348042.0 44 329784.0 45 311526.0 46 268043.0 47 224560.0 48 189819.0 49 155078.0 50 130407.5 51 105737.0 52 81684.5 53 57632.0 54 41945.0 55 26258.0 56 21000.5 57 15743.0 58 13992.5 59 12242.0 60 11668.0 61 11094.0 62 9685.5 63 8277.0 64 7162.5 65 6048.0 66 4953.5 67 3859.0 68 3333.5 69 2808.0 70 2399.5 71 1991.0 72 1739.0 73 1487.0 74 1114.5 75 605.5 76 469.0 77 313.5 78 158.0 79 132.5 80 107.0 81 78.5 82 50.0 83 34.0 84 18.0 85 14.5 86 11.0 87 9.0 88 7.0 89 4.0 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2221889.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.743329510159546 #Duplication Level Percentage of deduplicated Percentage of total 1 81.4019625998138 12.815379199825525 2 7.783237047577847 2.450681309913988 3 2.647635861260567 1.2504781136022052 4 1.3745387809610863 0.865592678126536 5 0.8769727881541657 0.6903235787677187 6 0.6524374569517276 0.616292272173695 7 0.4409630197764579 0.4859558285495044 8 0.36564751648721244 0.46052074693037454 9 0.2995591853493812 0.424445306647524 >10 2.614628098851583 8.657825147546129 >50 0.4308559784955558 4.764793563360818 >100 0.812659148564377 33.43672063287708 >500 0.2771015663651793 27.7345340646842 >1k 0.021227242143916428 4.726178520729868 >5k 5.737092471328764E-4 0.6202790362648442 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7455 0.3355253120205375 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 6280 0.2826423822252147 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3278 0.14753212244176014 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3033 0.13650546899507582 No Hit TGGTATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 2727 0.12273340387391089 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2252 0.10135519821197188 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.027274089749757976 0.0 2 0.0 0.0 0.0 0.09064359200662139 0.0 3 0.0 0.0 0.0 0.12574885604096334 0.0 4 0.0 0.0 0.0 0.1816472380033386 0.0 5 0.0 0.0 0.0 0.3078011547831597 0.0 6 0.0 0.0 0.0 0.4513276765851039 0.0 7 0.0 0.0 0.0 0.5559233607079381 0.0 8 0.0 0.0 0.0 0.8850577144042749 0.0 9 0.0 0.0 0.0 1.0535179750203543 0.0 10 0.0 0.0 0.0 1.3416961873432922 0.0 11 0.0 0.0 0.0 1.5665949109068904 0.0 12 0.0 0.0 0.0 1.7615641465437741 0.0 13 0.0 0.0 0.0 1.8404609771235196 0.0 14 0.0 0.0 0.0 1.865034661947559 0.0 15 0.0 0.0 0.0 1.9036054456365732 0.0 16 0.0 0.0 0.0 1.9995148272483458 0.0 17 4.5006748761976855E-5 0.0 0.0 2.1105914831929047 0.0 18 4.5006748761976855E-5 0.0 0.0 2.301015037204829 0.0 19 4.5006748761976855E-5 0.0 0.0 2.3637544449790244 0.0 20 4.5006748761976855E-5 0.0 0.0 2.4337849460526604 0.0 21 4.5006748761976855E-5 0.0 0.0 2.5251486460394736 0.0 22 4.5006748761976855E-5 0.0 0.0 2.621508095138866 0.0 23 4.5006748761976855E-5 0.0 0.0 2.7350151155165716 0.0 24 4.5006748761976855E-5 0.0 0.0 2.820527938164328 0.0 25 4.5006748761976855E-5 0.0 0.0 2.8907834729817736 0.0 26 4.5006748761976855E-5 0.0 0.0 2.9587886703611206 0.0 27 4.5006748761976855E-5 0.0 0.0 3.0288641781835186 0.0 28 4.5006748761976855E-5 0.0 0.0 3.105330644330117 0.0 29 4.5006748761976855E-5 0.0 0.0 3.186477812347962 0.0 30 4.5006748761976855E-5 0.0 0.0 3.3093462364681585 0.0 31 4.5006748761976855E-5 0.0 0.0 3.4200178316738596 0.0 32 4.5006748761976855E-5 0.0 0.0 3.5149370648128686 0.0 33 4.5006748761976855E-5 0.0 0.0 3.614086932335504 0.0 34 4.5006748761976855E-5 0.0 0.0 3.7120216176415655 0.0 35 4.5006748761976855E-5 0.0 0.0 3.8576184498865604 0.0 36 4.5006748761976855E-5 0.0 0.0 3.9697752678014067 0.0 37 4.5006748761976855E-5 0.0 0.0 4.084002396159304 0.0 38 4.5006748761976855E-5 0.0 0.0 4.1905783772276655 0.0 39 4.5006748761976855E-5 0.0 0.0 4.293553818395068 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCAAA 75 0.0 45.000004 12 TCACCAC 45 3.8562575E-10 45.000004 22 TCGGGCA 45 3.8562575E-10 45.000004 5 TGCGATA 75 0.0 45.000004 26 AGTGTCG 45 3.8562575E-10 45.000004 1 TGATCCG 20 7.0347113E-4 45.0 1 AACGTTG 85 0.0 45.0 1 CGGAACA 20 7.0347113E-4 45.0 20 TCGCACT 50 2.1827873E-11 45.0 23 CAAGTCG 35 1.2126111E-7 45.0 1 GGTCGAA 20 7.0347113E-4 45.0 8 CGAAAGT 55 1.8189894E-12 45.0 37 TTCACGG 20 7.0347113E-4 45.0 2 CGACAGA 20 7.0347113E-4 45.0 13 CGTTACA 35 1.2126111E-7 45.0 41 ATCCGGG 155 0.0 45.0 3 TAGCACG 55 1.8189894E-12 45.0 1 CCCCGTA 40 6.8193913E-9 45.0 34 TCAATCG 70 0.0 45.0 32 CCCGTAC 25 3.8919847E-5 45.0 15 >>END_MODULE