##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545116_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1339227 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.85842504668738 31.0 31.0 33.0 30.0 33.0 2 31.1868981136133 31.0 31.0 33.0 30.0 34.0 3 31.349242510791672 31.0 31.0 34.0 30.0 34.0 4 35.19524546622791 37.0 35.0 37.0 33.0 37.0 5 35.083564623473094 37.0 35.0 37.0 32.0 37.0 6 35.15665454773537 37.0 35.0 37.0 32.0 37.0 7 35.52739229421151 36.0 35.0 37.0 35.0 37.0 8 35.5983615921722 37.0 35.0 37.0 35.0 37.0 9 37.46867409333892 39.0 37.0 39.0 35.0 39.0 10 36.91560504679192 39.0 37.0 39.0 32.0 39.0 11 36.54565880168187 39.0 35.0 39.0 32.0 39.0 12 35.17976340082749 35.0 35.0 39.0 31.0 39.0 13 34.72279979420964 35.0 33.0 39.0 30.0 39.0 14 35.38242732561395 36.0 33.0 40.0 27.0 41.0 15 35.824701114896875 36.0 34.0 40.0 30.0 41.0 16 36.033061609420955 36.0 34.0 40.0 32.0 41.0 17 35.900917469555196 35.0 34.0 40.0 31.0 41.0 18 36.012710317220304 36.0 35.0 40.0 31.0 41.0 19 35.87952826518581 36.0 35.0 40.0 31.0 41.0 20 35.586918423837034 35.0 34.0 40.0 30.0 41.0 21 35.445222505221295 35.0 34.0 40.0 30.0 41.0 22 35.27957246979041 35.0 34.0 40.0 30.0 41.0 23 35.2383733302868 35.0 34.0 40.0 30.0 41.0 24 35.33571530442561 35.0 34.0 40.0 30.0 41.0 25 35.26453917073058 35.0 34.0 40.0 30.0 41.0 26 35.014368736592075 35.0 34.0 39.0 29.0 41.0 27 35.011868040294885 35.0 34.0 39.0 29.0 41.0 28 35.13268923042919 36.0 34.0 39.0 29.0 41.0 29 35.101819930452415 36.0 34.0 39.0 29.0 41.0 30 35.08464360410894 36.0 34.0 39.0 29.0 41.0 31 34.84297807615886 35.0 34.0 39.0 29.0 41.0 32 34.68463897457264 35.0 34.0 40.0 29.0 41.0 33 34.456151197668504 35.0 33.0 40.0 27.0 41.0 34 34.261416473831545 35.0 34.0 40.0 26.0 41.0 35 34.03357832540712 35.0 33.0 40.0 24.0 41.0 36 33.73164892882237 35.0 33.0 39.0 23.0 41.0 37 33.78817332685198 35.0 33.0 39.0 23.0 41.0 38 33.86459726394405 35.0 33.0 39.0 24.0 41.0 39 33.90055457364584 35.0 33.0 39.0 24.0 41.0 40 33.53017972307906 35.0 33.0 39.0 23.0 41.0 41 33.643383832613885 35.0 33.0 39.0 23.0 41.0 42 33.63742218458857 35.0 33.0 39.0 23.0 41.0 43 33.61048127016555 35.0 33.0 39.0 23.0 41.0 44 33.59387392876637 35.0 33.0 39.0 23.0 41.0 45 33.67211831900044 35.0 33.0 39.0 23.0 41.0 46 33.67764538797381 35.0 33.0 39.0 23.0 41.0 47 33.601873319459656 35.0 33.0 39.0 23.0 41.0 48 33.69660557918859 35.0 33.0 39.0 23.0 41.0 49 33.73272940285702 35.0 33.0 39.0 24.0 41.0 50 33.52840631199938 35.0 33.0 39.0 24.0 41.0 51 33.23229445045538 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 13.0 15 34.0 16 94.0 17 333.0 18 782.0 19 1549.0 20 2864.0 21 4705.0 22 7030.0 23 10230.0 24 14641.0 25 19835.0 26 25111.0 27 29154.0 28 31839.0 29 36066.0 30 43549.0 31 53579.0 32 68622.0 33 90583.0 34 164486.0 35 245131.0 36 74376.0 37 90305.0 38 130050.0 39 194197.0 40 66.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.607507166447512 24.012807388142562 32.42236006293183 12.957325382478102 2 29.993122898507867 25.938321135998603 32.29019426878341 11.778361696710117 3 26.70137325487016 25.851704005370262 34.18457065157737 13.262352088182213 4 23.716143715740497 30.23759228271234 32.95154592910687 13.094718072440296 5 22.359838922005007 32.81982815459963 32.583049774235434 12.237283149159927 6 19.071972115257534 42.39460524616066 28.823418285324294 9.710004353257514 7 88.34924923108629 4.199064086969573 6.578645741162625 0.8730409407815106 8 91.06409891676319 2.0918783746146095 5.817684380616579 1.026338328005633 9 87.47001068526843 3.6887697156643346 7.166895530033369 1.6743240690338532 10 58.20872787062985 22.239321638527297 12.75026563831225 6.8016848525306015 11 54.3406009586127 15.20660799102766 20.15125143086273 10.30153961949692 12 51.26778357963213 19.840400469823262 21.0749185910977 7.816897359446904 13 17.27123183747042 55.781133444890216 17.29228876060593 9.655345957033424 14 9.242495857685068 53.38557242349504 24.247271000360655 13.12466071845923 15 7.374925983421781 22.86856522456611 58.883520120188734 10.872988671823373 16 7.860653944402256 15.611169727014165 56.149554929821456 20.378621398762125 17 8.012980622403818 17.679676410347163 30.88968487045139 43.41765809679763 18 14.670179140653527 21.714317289003283 45.777825566539505 17.837678003803685 19 31.51444826007839 21.899797420452245 27.194045520288945 19.391708799180424 20 33.515154637712655 18.816600919784324 30.2433418681075 17.424902574395528 21 14.48454966932417 35.083074041966 31.276773840431833 19.155602448278 22 18.904114089695025 23.417762634713906 20.480097847489635 37.19802542810143 23 11.476471128494273 35.575074277923015 24.028189395823112 28.920265197759605 24 8.775808731454788 19.780365837905002 59.15546804238564 12.288357388254568 25 8.747508824120183 27.23742875554331 47.423999068119144 16.59106335221736 26 10.210143612695981 41.948377683544315 28.54758752623715 19.293891177522557 27 7.676816551637623 51.43146008854361 25.491048194219502 15.400675165599258 28 7.485213485092519 33.48536133157411 43.881806445061216 15.147618738272154 29 7.361261384365757 23.018054444840192 42.90758773531299 26.713096435481066 30 12.173440350291624 44.55577732527794 30.504462648975867 12.766319675454572 31 31.03902475084508 32.57222263290689 26.248276057755703 10.140476558492324 32 34.440315196751556 21.975811419572633 28.722240516357573 14.861632867318237 33 35.10353360557993 28.77570419353851 19.830096018076098 16.290666182805456 34 17.17401157533413 24.264071736904945 25.58274288078123 32.9791738069797 35 17.608067937698387 24.743602092849084 36.5810277122549 21.067302257197625 36 37.3337007094391 27.665511522691823 21.5813301255127 13.419457642356376 37 14.157495331261991 46.09367941357216 28.611355655165255 11.137469600000598 38 14.296530759908515 42.26938375645055 26.574434356535527 16.859651127105412 39 17.153477341779997 42.9024355094394 26.346093679413574 13.597993469367031 40 27.52737213332766 24.374433908515883 27.01692842214203 21.08126553601443 41 11.871400442195386 24.374657918336474 28.617329250381 35.136612389087134 42 14.352533215056148 21.217314167053082 25.989619384913837 38.44053323297693 43 14.949370047049529 21.54996875063003 30.65059172194109 32.850069480379354 44 10.712970989981534 30.293520067919776 36.46528930494979 22.52821963714889 45 9.850757190528567 54.68318664423582 20.495405185229988 14.970650980005631 46 16.179855991553335 45.1792713259216 23.96852811360583 14.672344568919234 47 15.20302383389821 31.536849242137443 25.991336793538363 27.268790130425984 48 15.946437758498 25.992008823000134 41.3760325919355 16.685520826566368 49 20.629437727883325 26.774400456382676 39.84044527178738 12.755716543946619 50 16.91296546440596 45.443826924039016 24.85971384985518 12.783493761699846 51 13.87987249361012 38.984279737490354 26.686737946591577 20.449109822307943 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1690.0 1 1959.5 2 2229.0 3 5652.0 4 9075.0 5 7364.0 6 5653.0 7 6183.5 8 6714.0 9 7055.0 10 7396.0 11 7399.5 12 7403.0 13 7020.0 14 6637.0 15 6425.0 16 6213.0 17 5978.0 18 5743.0 19 5019.5 20 4296.0 21 4750.0 22 5204.0 23 5491.5 24 5779.0 25 6339.0 26 11357.0 27 15815.0 28 18697.0 29 21579.0 30 26661.5 31 31744.0 32 39665.5 33 47587.0 34 56341.0 35 65095.0 36 71354.0 37 77613.0 38 86416.5 39 95220.0 40 123200.5 41 151181.0 42 181003.5 43 210826.0 44 201173.5 45 191521.0 46 162349.5 47 133178.0 48 109067.0 49 84956.0 50 69662.0 51 54368.0 52 43040.0 53 31712.0 54 22914.5 55 14117.0 56 11096.5 57 8076.0 58 7189.0 59 6302.0 60 5618.0 61 4934.0 62 4371.0 63 3808.0 64 3320.5 65 2833.0 66 2418.5 67 2004.0 68 1645.5 69 1287.0 70 1110.0 71 933.0 72 829.0 73 725.0 74 561.0 75 320.5 76 244.0 77 186.0 78 128.0 79 95.0 80 62.0 81 44.5 82 27.0 83 22.0 84 17.0 85 11.0 86 5.0 87 3.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1339227.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.864348551395832 #Duplication Level Percentage of deduplicated Percentage of total 1 81.36432423000298 12.907919992335485 2 7.280212652015912 2.309916620797245 3 2.475419175181122 1.178127378176463 4 1.3041977475768232 0.8276099059001634 5 0.8161827654278394 0.6474103936194693 6 0.605861050544702 0.57669545277336 7 0.46037390286418256 0.5112472441302689 8 0.38224969537441766 0.48513139208677125 9 0.322211878428986 0.46005133921176733 >10 2.9380507456197584 9.756192559707584 >50 0.550971260399921 6.24918523516555 >100 1.4376242398600707 56.68367680873132 >500 0.05618301627039358 5.8723646234443745 >1k 0.006137640432900138 1.5344710539201931 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4723 0.35266612754969845 No Hit AGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTAT 1992 0.14874252087211504 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1559 0.11641043676688119 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1457 0.10879410286680302 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1435 0.10715136418247243 No Hit TTGATAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1405 0.10491126597656708 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.026059809128698867 0.0 2 0.0 0.0 0.0 0.10005771986377215 0.0 3 0.0 0.0 0.0 0.14090217715144632 0.0 4 0.0 0.0 0.0 0.20519299566092977 0.0 5 0.0 0.0 0.0 0.341316296639778 0.0 6 0.0 0.0 0.0 0.477066247917642 0.0 7 0.0 0.0 0.0 0.5577097833302346 0.0 8 0.0 0.0 0.0 0.7772394075089585 0.0 9 0.0 0.0 0.0 0.8529547268685592 0.0 10 0.0 0.0 0.0 0.9884806683258327 0.0 11 0.0 0.0 0.0 1.123110570500744 0.0 12 0.0 0.0 0.0 1.2375049188823104 0.0 13 0.0 0.0 0.0 1.2830535824023859 0.0 14 0.0 0.0 0.0 1.2988089397839202 0.0 15 0.0 0.0 0.0 1.3286022459224613 0.0 16 0.0 0.0 0.0 1.4017787873153693 0.0 17 0.0 0.0 0.0 1.4942201732790632 0.0 18 0.0 0.0 0.0 1.6486376096061384 0.0 19 0.0 0.0 0.0 1.7062828034381028 0.0 20 0.0 0.0 0.0 1.7568343529513668 0.0 21 0.0 0.0 0.0 1.8402406761512424 0.0 22 0.0 0.0 0.0 1.9258870975570235 0.0 23 0.0 0.0 0.0 2.037817337912094 0.0 24 0.0 0.0 0.0 2.119655592367836 0.0 25 0.0 0.0 0.0 2.185141129920469 0.0 26 0.0 0.0 0.0 2.252717425798614 0.0 27 0.0 0.0 0.0 2.323355189224829 0.0 28 0.0 0.0 0.0 2.3904834654617924 0.0 29 0.0 0.0 0.0 2.4747858279440305 0.0 30 0.0 0.0 0.0 2.592913673335439 0.0 31 0.0 0.0 0.0 2.69513682146492 0.0 32 0.0 0.0 0.0 2.782052631854047 0.0 33 0.0 0.0 0.0 2.8655336249941197 0.0 34 0.0 0.0 0.0 2.961111148446081 0.0 35 0.0 0.0 0.0 3.1052241330259918 0.0 36 0.0 0.0 0.0 3.201548355879922 0.0 37 0.0 0.0 0.0 3.3129559066536145 0.0 38 0.0 0.0 0.0 3.404053233693765 0.0 39 0.0 0.0 0.0 3.5035882639761593 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 35 1.2121382E-7 45.000004 1 ATTCGGA 35 1.2121382E-7 45.000004 14 TTGCGAG 35 1.2121382E-7 45.000004 1 GCGATAC 35 1.2121382E-7 45.000004 9 CTCGCAC 35 1.2121382E-7 45.000004 13 CTCGAGG 35 1.2121382E-7 45.000004 2 CGCACAA 35 1.2121382E-7 45.000004 15 GCTACGG 145 0.0 45.000004 2 AATACGG 140 0.0 45.000004 2 AAAGCGT 70 0.0 45.000004 5 CGGACAA 20 7.033705E-4 45.0 17 CCTTCGT 40 6.8157533E-9 45.0 23 CTTCGTC 40 6.8157533E-9 45.0 24 GTCATCG 25 3.891152E-5 45.0 9 CGGGTGC 55 1.8189894E-12 45.0 6 CGGGTCG 20 7.033705E-4 45.0 6 CGGGTCA 55 1.8189894E-12 45.0 6 CGGGTAT 110 0.0 45.0 6 AGCGTCA 20 7.033705E-4 45.0 35 CTATGCG 75 0.0 45.0 1 >>END_MODULE