##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545112_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1529426 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.88259255433084 31.0 31.0 33.0 30.0 33.0 2 31.193344431178755 31.0 31.0 33.0 30.0 34.0 3 31.342519350396817 31.0 31.0 34.0 28.0 34.0 4 35.19917406922597 37.0 35.0 37.0 33.0 37.0 5 35.08816444862321 37.0 35.0 37.0 32.0 37.0 6 35.16698356115301 37.0 35.0 37.0 32.0 37.0 7 35.56365329215013 36.0 35.0 37.0 35.0 37.0 8 35.62662528294929 37.0 35.0 37.0 35.0 37.0 9 37.45590567964714 39.0 37.0 39.0 35.0 39.0 10 36.96966705156052 39.0 37.0 39.0 33.0 39.0 11 36.5419288020473 39.0 35.0 39.0 32.0 39.0 12 35.115373349217286 35.0 35.0 39.0 31.0 39.0 13 34.6921649036959 35.0 33.0 39.0 30.0 39.0 14 35.33580114369705 35.0 33.0 40.0 28.0 41.0 15 35.786109952361215 36.0 34.0 40.0 31.0 41.0 16 35.96995539503055 35.0 34.0 40.0 31.0 41.0 17 35.81036022664712 35.0 34.0 40.0 31.0 41.0 18 35.89008359999111 36.0 35.0 40.0 31.0 41.0 19 35.76522760826611 36.0 35.0 40.0 31.0 41.0 20 35.48605097598707 35.0 34.0 40.0 30.0 41.0 21 35.33704997822713 35.0 34.0 40.0 30.0 41.0 22 35.159805051045296 35.0 34.0 40.0 30.0 41.0 23 35.11771671202137 35.0 34.0 39.0 29.0 41.0 24 35.2059177756884 35.0 34.0 39.0 30.0 41.0 25 35.08371114391935 35.0 34.0 39.0 30.0 41.0 26 34.85027389360453 35.0 34.0 39.0 29.0 41.0 27 34.8236338338697 35.0 34.0 39.0 29.0 41.0 28 34.900147506319364 35.0 34.0 39.0 29.0 41.0 29 34.90845585206476 36.0 34.0 39.0 29.0 41.0 30 34.86280604618988 36.0 34.0 39.0 29.0 41.0 31 34.591483994648975 35.0 34.0 39.0 29.0 41.0 32 34.42685425774114 35.0 34.0 39.0 27.0 41.0 33 34.16796105205482 35.0 33.0 39.0 26.0 41.0 34 33.96174185609503 35.0 33.0 39.0 24.0 41.0 35 33.75184677127236 35.0 33.0 39.0 23.0 41.0 36 33.47472188912703 35.0 33.0 39.0 23.0 41.0 37 33.48640862650432 35.0 33.0 39.0 23.0 41.0 38 33.55285381574525 35.0 33.0 39.0 23.0 41.0 39 33.56182057843923 35.0 33.0 39.0 23.0 41.0 40 33.22592332025217 35.0 32.0 39.0 23.0 41.0 41 33.33776201006129 35.0 32.0 39.0 23.0 41.0 42 33.31739881498026 35.0 33.0 39.0 23.0 41.0 43 33.28401177958267 35.0 33.0 39.0 23.0 41.0 44 33.26105872399188 35.0 33.0 39.0 23.0 41.0 45 33.3291215135613 35.0 33.0 39.0 23.0 41.0 46 33.343604724909866 35.0 33.0 39.0 23.0 41.0 47 33.271371089546015 35.0 33.0 39.0 23.0 41.0 48 33.316760013233726 35.0 33.0 39.0 23.0 41.0 49 33.36713250592052 35.0 33.0 39.0 23.0 41.0 50 33.122908856002184 35.0 32.0 38.0 23.0 41.0 51 32.838947422104766 35.0 32.0 38.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 1.0 12 4.0 13 3.0 14 19.0 15 51.0 16 151.0 17 390.0 18 945.0 19 1908.0 20 3376.0 21 5579.0 22 8689.0 23 12655.0 24 17680.0 25 24127.0 26 30740.0 27 35253.0 28 38413.0 29 43565.0 30 50761.0 31 62267.0 32 79790.0 33 106433.0 34 195118.0 35 285520.0 36 84941.0 37 100482.0 38 144411.0 39 196048.0 40 103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.316977741976405 24.243016661152616 30.400817038549103 14.03918855832188 2 29.97026335370263 26.420696391979735 31.87208795979668 11.73695229452095 3 27.228319644101774 25.705329973467173 34.11999011393817 12.946360268492885 4 25.786013837871202 27.680319283182058 33.33832431251986 13.195342566426882 5 21.303090178929875 33.59855265962525 32.17998124786685 12.918375913578034 6 19.50064926318763 41.419460634251024 30.028782039797935 9.051108062763417 7 86.93751773541184 4.274414061222968 7.616256033309228 1.1718121700559556 8 88.28880900416235 3.139151550974026 7.29469748781569 1.2773419570479383 9 84.60108563604908 4.8195205260012575 8.887124973682937 1.6922688642667247 10 60.56886701285319 19.64436331015688 13.013313491466732 6.773456185523196 11 56.77901382610207 16.007443315335294 19.53052975429998 7.6830131042626455 12 50.74322000541379 21.501007567544946 19.94467205343704 7.811100373604216 13 16.91621562599302 54.350259509123035 19.755058433686887 8.978466431197063 14 9.944580515827507 54.12546929370888 25.802555991594232 10.12739419886938 15 9.104984484375183 22.61462797153965 59.111261349028986 9.169126195056185 16 9.78262433095815 16.71764439730984 56.66236875795233 16.83736251377968 17 10.224750985010063 16.718886693439238 31.379811772521194 41.67655054902951 18 15.772126274824672 22.621231756227502 45.22637904677964 16.380262922168185 19 33.58181435388178 19.473449516354503 28.547049677460695 18.397686452303024 20 33.557622271361936 20.870051901824606 29.08195623717656 16.490369589636895 21 16.402558868490534 35.42211260956725 31.21314793916149 16.96218058278073 22 18.96731191963521 25.002059596214526 21.58025298379915 34.45037550035111 23 12.371700232636297 35.129126875049856 25.72344134335365 26.775731548960195 24 10.307919441672889 20.661411536092626 56.925604769371 12.105064252863492 25 9.586668462547387 25.29654916288856 49.3032680234284 15.813514351135655 26 9.311924865930093 43.35561184392053 29.712650366869664 17.619812923279714 27 9.92522684981163 51.0809284005895 26.828888746497054 12.164956003101818 28 9.18148377234335 35.17777257611679 43.98604443758639 11.65469921395347 29 9.32617857941476 25.00918645295686 42.922900486849315 22.741734480779062 30 14.192317902271833 43.400203736565224 29.813472505371298 12.594005855791652 31 32.91012445191856 30.398855518344792 26.000669532229736 10.690350497506907 32 36.39012283039519 22.57729370365091 29.667339250150054 11.365244215803838 33 36.12577529086076 27.47880577419241 21.058423225445363 15.336995709501473 34 19.20393664028204 26.15556424436357 24.849191788291815 29.791307327062572 35 18.583377031644552 24.529006306941298 35.684040940849705 21.203575720564448 36 38.39263880697726 26.560552782547177 22.889763872197804 12.15704453827776 37 15.330784228854485 46.28180768471309 27.218904347121075 11.16850373931135 38 15.937678580068601 43.99081747008355 23.45173941073318 16.619764539114673 39 19.784154316717515 41.123074931379485 26.082138004715492 13.010632747187506 40 28.162330181388313 24.643886006907167 24.503245008258002 22.690538803446522 41 13.397967603532305 24.563136758496324 27.78820289441921 34.25069274355216 42 15.503594158854368 21.004612187840404 27.09474011818813 36.397053535117095 43 16.841481706208736 21.52317274585367 28.742155553782922 32.89318999415467 44 11.579965294169185 32.14781231651613 35.45225463670684 20.81996775260784 45 11.609126561206622 52.5013305645386 21.987856882255173 13.901685991999614 46 18.15635408316584 43.396346080163404 23.579630528054317 14.867669308616435 47 16.823893408376737 30.37407497976365 25.9237125562139 26.87831905564571 48 17.766796170589487 27.68888458807422 39.698095886953666 14.846223354382623 49 22.396572308826972 27.46925970919809 38.1180913623804 12.01607661959454 50 17.74685404851232 45.216506061751275 24.398892133388607 12.637747756347807 51 15.975862840045874 40.11282664215202 24.392484500721185 19.51882601708092 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2192.0 1 2879.5 2 3567.0 3 8172.5 4 12778.0 5 10227.0 6 7676.0 7 8056.0 8 8436.0 9 9008.0 10 9580.0 11 9812.0 12 10044.0 13 9712.0 14 9380.0 15 8883.0 16 8386.0 17 8052.5 18 7719.0 19 7333.0 20 6947.0 21 7606.5 22 8266.0 23 8005.0 24 7744.0 25 9044.0 26 13704.5 27 17065.0 28 21016.0 29 24967.0 30 30366.5 31 35766.0 32 42576.5 33 49387.0 34 54915.0 35 60443.0 36 64818.0 37 69193.0 38 81064.0 39 92935.0 40 134979.0 41 177023.0 42 210322.5 43 243622.0 44 235044.5 45 226467.0 46 187661.5 47 148856.0 48 125794.5 49 102733.0 50 85203.0 51 67673.0 52 52153.0 53 36633.0 54 27558.0 55 18483.0 56 14799.5 57 11116.0 58 10046.5 59 8977.0 60 8159.0 61 7341.0 62 6313.5 63 5286.0 64 4614.0 65 3942.0 66 3273.5 67 2605.0 68 2169.5 69 1734.0 70 1596.5 71 1459.0 72 1323.5 73 1188.0 74 954.0 75 558.5 76 397.0 77 284.0 78 171.0 79 139.5 80 108.0 81 69.5 82 31.0 83 27.0 84 23.0 85 17.5 86 12.0 87 7.5 88 3.0 89 4.5 90 6.0 91 3.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1529426.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.27964464971229 #Duplication Level Percentage of deduplicated Percentage of total 1 80.41888028096358 13.896096743828053 2 7.495753320686798 2.5904790752673748 3 2.645629462778178 1.3714661097484844 4 1.5140463337225376 1.046487305197006 5 1.0114928731681156 0.8739118707030771 6 0.7145643907315454 0.7408451250707563 7 0.5388638256797158 0.6517962795630998 8 0.42929314354666914 0.5934426376835497 9 0.34510633555217207 0.5366983360235315 >10 3.1405809992933484 11.362346118469572 >50 0.5100271211007809 6.29344999974434 >100 1.154871535572725 49.895330392292315 >500 0.07329503662135348 8.110009077336242 >1k 0.007215573553397493 1.5856995075878573 >5k 3.7976702912618387E-4 0.45194142148475314 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6887 0.45029965490321205 No Hit TTTAATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1686 0.11023743548233128 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1614 0.10552978699198261 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1574 0.10291442671956669 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.018176753893290685 0.0 2 0.0 0.0 0.0 0.06760706304195169 0.0 3 0.0 0.0 0.0 0.09650679405214767 0.0 4 0.0 0.0 0.0 0.15306395994314206 0.0 5 0.0 0.0 0.0 0.27016671614056514 0.0 6 0.0 0.0 0.0 0.40067319373411986 0.0 7 0.0 0.0 0.0 0.4948261635410932 0.0 8 0.0 0.0 0.0 0.7691120721107134 0.0 9 0.0 0.0 0.0 0.8755572351980416 0.0 10 0.0 0.0 0.0 1.0426787566054192 0.0 11 0.0 0.0 0.0 1.17089679396061 0.0 12 0.0 0.0 0.0 1.2917918225530363 0.0 13 0.0 0.0 0.0 1.3427259638583364 0.0 14 0.0 0.0 0.0 1.3610988697720583 0.0 15 0.0 0.0 0.0 1.3888870726664775 0.0 16 0.0 0.0 0.0 1.4570172077629124 0.0 17 0.0 0.0 0.0 1.5318818955608182 0.0 18 0.0 0.0 0.0 1.6598383968887673 0.0 19 0.0 0.0 0.0 1.7126686743915691 0.0 20 0.0 0.0 0.0 1.7662835599760955 0.0 21 0.0 0.0 0.0 1.845202056196246 0.0 22 0.0 0.0 0.0 1.9261474566275192 0.0 23 0.0 0.0 0.0 2.026838827115532 0.0 24 0.0 0.0 0.0 2.1047765632335267 0.0 25 0.0 0.0 0.0 2.1702259540507356 0.0 26 0.0 0.0 0.0 2.2347599687725985 0.0 27 0.0 0.0 0.0 2.3000132075693758 0.0 28 0.0 0.0 0.0 2.3674241185908964 0.0 29 0.0 0.0 0.0 2.4509194952877746 0.0 30 0.0 0.0 0.0 2.5727298999755464 0.0 31 0.0 0.0 0.0 2.684340399600896 0.0 32 0.0 0.0 0.0 2.783854857966322 0.0 33 0.0 0.0 0.0 2.882323172222782 0.0 34 0.0 0.0 0.0 2.9822953186358805 0.0 35 0.0 0.0 0.0 3.125943981598325 0.0 36 0.0 0.0 0.0 3.2469043941975615 0.0 37 0.0 0.0 0.0 3.3598879579659298 0.0 38 0.0 0.0 0.0 3.4764676421088696 0.0 39 0.0 0.0 0.0 3.5851358614277515 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGGAA 20 7.0340186E-4 45.000004 25 ACCGGGT 20 7.0340186E-4 45.000004 4 CGTATTA 20 7.0340186E-4 45.000004 31 CTCGTAG 65 0.0 45.000004 1 CACGGGT 40 6.8175723E-9 45.000004 4 GACACGC 20 7.0340186E-4 45.000004 13 CGCATCA 20 7.0340186E-4 45.000004 22 CCAGCGA 20 7.0340186E-4 45.000004 34 TTCGTGC 20 7.0340186E-4 45.000004 1 ATTCGCA 20 7.0340186E-4 45.000004 43 CTAAGCG 80 0.0 45.000004 1 CGATTAC 20 7.0340186E-4 45.000004 17 ACGGGCT 80 0.0 45.000004 5 TGGTTCG 20 7.0340186E-4 45.000004 37 TACGCGA 20 7.0340186E-4 45.000004 43 CGCTACT 20 7.0340186E-4 45.000004 39 ACGCTTC 65 0.0 45.000004 24 GACGGAC 20 7.0340186E-4 45.000004 29 CGAGAAT 20 7.0340186E-4 45.000004 25 ACGTACT 20 7.0340186E-4 45.000004 19 >>END_MODULE