SRR1545109_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545109_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1440471
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5598	0.38862288793040606	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1499	0.10406318488883151	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCGTA	75	0.0	45.000004	43
ACGGGCG	65	0.0	45.000004	5
GACGGGC	65	0.0	45.000004	4
TCACGAA	20	7.0338824E-4	45.0	23
CGGGTAC	20	7.0338824E-4	45.0	6
AACCGAT	20	7.0338824E-4	45.0	39
GGTGTCG	20	7.0338824E-4	45.0	20
GTCGACG	20	7.0338824E-4	45.0	1
CTCCGCG	55	1.8189894E-12	45.0	1
CCGATCA	45	3.8562575E-10	45.0	9
TTAGCCG	20	7.0338824E-4	45.0	1
TAGACGC	40	6.8175723E-9	45.0	21
GCGAACG	20	7.0338824E-4	45.0	1
GCAACTA	45	3.8562575E-10	45.0	9
GATCCCC	35	1.2122109E-7	45.0	44
ACCGACA	20	7.0338824E-4	45.0	42
ACTTCGA	20	7.0338824E-4	45.0	21
TACGGGT	95	0.0	45.0	4
TCGATAT	20	7.0338824E-4	45.0	16
ACGGGCC	20	7.0338824E-4	45.0	5