##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545108_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1620678 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.820916307866213 31.0 31.0 33.0 28.0 33.0 2 31.11737063130369 31.0 31.0 33.0 30.0 34.0 3 31.232486033622965 31.0 31.0 34.0 28.0 34.0 4 35.12519636843346 35.0 35.0 37.0 32.0 37.0 5 34.99109570192228 35.0 35.0 37.0 32.0 37.0 6 35.06373382004322 37.0 35.0 37.0 32.0 37.0 7 35.451623949976494 35.0 35.0 37.0 35.0 37.0 8 35.49894858818347 37.0 35.0 37.0 35.0 37.0 9 37.28876803411905 39.0 37.0 39.0 35.0 39.0 10 36.842675102642225 39.0 37.0 39.0 32.0 39.0 11 36.45982298766319 38.0 35.0 39.0 32.0 39.0 12 35.13939166200812 35.0 35.0 39.0 30.0 39.0 13 34.646117859315666 35.0 33.0 39.0 27.0 39.0 14 35.344084389372846 36.0 33.0 40.0 27.0 41.0 15 35.76156398741761 36.0 34.0 40.0 30.0 41.0 16 35.97588478402249 36.0 34.0 40.0 31.0 41.0 17 35.74468278091021 36.0 34.0 40.0 31.0 41.0 18 35.82135254504596 36.0 35.0 40.0 31.0 41.0 19 35.66861585089697 36.0 34.0 40.0 30.0 41.0 20 35.300198435469596 35.0 34.0 39.0 29.0 41.0 21 35.21187120452058 35.0 34.0 40.0 29.0 41.0 22 35.0334921557521 35.0 34.0 39.0 29.0 41.0 23 34.89474220048646 35.0 34.0 39.0 29.0 41.0 24 35.012323237558604 35.0 34.0 39.0 29.0 41.0 25 34.99112346807941 35.0 34.0 39.0 29.0 41.0 26 34.67186140615224 35.0 34.0 39.0 29.0 41.0 27 34.61990413888508 35.0 34.0 39.0 29.0 41.0 28 34.68061761805861 35.0 34.0 39.0 29.0 41.0 29 34.6472531866293 35.0 34.0 39.0 28.0 41.0 30 34.62576279803884 35.0 34.0 39.0 28.0 41.0 31 34.38070671657171 35.0 33.0 39.0 27.0 41.0 32 34.15671157379813 35.0 33.0 39.0 25.0 41.0 33 33.862354520762295 35.0 33.0 39.0 24.0 41.0 34 33.55754628618393 35.0 33.0 39.0 23.0 41.0 35 33.26939651183024 35.0 33.0 39.0 23.0 41.0 36 33.04261179580398 35.0 32.0 39.0 21.0 41.0 37 33.06264106750385 35.0 32.0 39.0 21.0 41.0 38 33.06419041907152 35.0 32.0 39.0 22.0 41.0 39 33.06190063664713 35.0 32.0 39.0 21.0 41.0 40 32.728390833959615 35.0 31.0 39.0 18.0 41.0 41 32.79739837277979 35.0 32.0 39.0 19.0 41.0 42 32.75293118065402 35.0 32.0 39.0 18.0 41.0 43 32.70758842904019 35.0 32.0 39.0 18.0 41.0 44 32.710643323349856 35.0 32.0 39.0 18.0 41.0 45 32.810769320000645 35.0 32.0 39.0 20.0 41.0 46 32.7964419829232 35.0 32.0 39.0 20.0 41.0 47 32.67336941699708 35.0 32.0 38.0 19.0 41.0 48 32.7622988650429 35.0 32.0 38.0 20.0 41.0 49 32.780994127149256 35.0 32.0 38.0 20.0 41.0 50 32.53958405062573 35.0 31.0 38.0 18.0 40.0 51 32.309581545501324 35.0 31.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 5.0 13 9.0 14 16.0 15 53.0 16 195.0 17 568.0 18 1335.0 19 2744.0 20 5080.0 21 8452.0 22 12998.0 23 18070.0 24 23687.0 25 30616.0 26 37259.0 27 41120.0 28 43202.0 29 48072.0 30 56340.0 31 67878.0 32 85062.0 33 111197.0 34 197208.0 35 281844.0 36 90297.0 37 107320.0 38 148811.0 39 201123.0 40 114.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.53719862921567 22.840811067960445 28.691387184869544 14.93060311795434 2 30.67623550143829 27.514657445834395 29.17815877058861 12.63094828213871 3 25.949571722451964 26.80952045995565 34.858991113595664 12.381916703996723 4 24.397566944204833 27.768255014259463 35.223036284814135 12.611141756721569 5 24.143537457780013 31.014057079814744 32.03344526179784 12.8089602006074 6 19.539106472723144 41.77609617703208 29.606683128912714 9.07811422133206 7 82.6131409200347 5.06485557279114 10.76191569207455 1.5600878150996065 8 84.66166629028098 5.081206754210275 8.713390321828273 1.543736633680472 9 80.01490734124854 5.413907019161116 10.585014419890934 3.9861712196994095 10 57.676602014712365 19.78431249143877 14.913820018535453 7.625265475313419 11 54.428208441158574 15.893595149684266 21.177062932920666 8.50113347623649 12 48.060441370833686 20.75032794916695 21.98215808445601 9.207072595543346 13 18.35929160511835 49.42709162461637 22.365145945092117 9.848470825173168 14 10.236888512091854 51.1648211427563 27.77485718939851 10.823433155753333 15 9.07792911361788 22.1575784949262 57.43571517599424 11.328777215461677 16 9.601043513887397 16.781310044314786 55.266129360674974 18.35151708112284 17 10.111015266450215 17.839324035989875 33.11280834317489 38.93685235438502 18 15.583416323291857 22.188923401193822 44.52074995773374 17.706910317780583 19 31.45486024984605 19.131375880958462 29.860589210194743 19.55317465900074 20 32.18264207942602 20.66999120121332 31.043180693512223 16.104186025848442 21 16.70449034293055 34.68048557455584 31.93009345471463 16.684930627798984 22 18.914676450226388 24.24435945943611 24.27224902170573 32.56871506863177 23 13.265991146915058 33.458342742975475 27.436727098165086 25.838939011944383 24 11.03828150934362 21.44287761048154 54.641946148463795 12.87689473171105 25 9.734259365524798 26.049900103536917 47.95190654775347 16.263933983184813 26 9.481093715099483 39.88195064041099 31.994017318677738 18.64293832581179 27 11.216046617526738 48.26214707671728 27.433703672166832 13.088102633589152 28 9.437346591981873 34.862693267879244 42.98404741719206 12.715912722946815 29 10.0471531050585 25.12294237350047 42.20795247421141 22.621952047229616 30 14.215902233509677 42.60698300340968 29.734345749124746 13.442769013955887 31 30.381297210179937 29.98405605555206 27.27290677111678 12.361739963151225 32 35.40413333185247 21.343721578253053 31.119259964039742 12.132885125854735 33 34.87065289958894 27.0378199741096 21.794026944278876 16.29750018202259 34 19.167903803223098 25.72491266001019 25.899284126766698 29.20789941000001 35 19.203444484345443 24.126199035218594 35.504893630937175 21.16546284949879 36 36.61226967972663 25.84011136080085 23.812318054542605 13.735300904929911 37 15.508756211906375 42.837565512705176 29.555778507513526 12.097899767874926 38 16.3411856025688 41.500841006048084 23.776222050277724 18.38175134110539 39 19.642273172092175 38.97720583607601 26.86826130792175 14.512259683910067 40 27.514040420120466 23.469683675597498 26.230441827432717 22.78583407684932 41 14.094039655008583 23.9324529610447 28.753336566548075 33.22017081739864 42 15.48969011734595 21.505999341016537 28.337214425073952 34.66709611656356 43 17.23500905176722 21.42449024420644 29.866080739048716 31.474419964977617 44 12.78187277176589 30.7734170513822 34.69486227369039 21.749847903161516 45 11.92704534768782 50.67897509560814 22.707595216323046 14.686384340381 46 19.0013685630335 41.36935282640969 24.11021806922782 15.519060541328999 47 16.78655476288319 30.35556723790907 26.911514810468212 25.94636318873953 48 18.378851320249918 27.021160279833502 39.25184398134608 15.3481444185705 49 22.052930933843736 26.874678375346615 37.56495738203394 13.50743330877571 50 18.69384294721098 42.04135553145042 25.263192318276673 14.00160920306193 51 15.713423641216826 38.74798078335117 25.428493507038414 20.110102068393598 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2834.0 1 3711.5 2 4589.0 3 11848.0 4 19107.0 5 14898.0 6 10689.0 7 11109.5 8 11530.0 9 11964.0 10 12398.0 11 12125.0 12 11852.0 13 11432.5 14 11013.0 15 10696.5 16 10380.0 17 9227.0 18 8074.0 19 8835.0 20 9596.0 21 9079.0 22 8562.0 23 8556.5 24 8551.0 25 11297.5 26 16224.0 27 18404.0 28 23578.0 29 28752.0 30 33607.5 31 38463.0 32 45355.0 33 52247.0 34 58093.0 35 63939.0 36 62150.5 37 60362.0 38 76660.5 39 92959.0 40 130264.0 41 167569.0 42 200934.0 43 234299.0 44 225699.0 45 217099.0 46 195220.0 47 173341.0 48 139141.5 49 104942.0 50 87457.0 51 69972.0 52 56388.0 53 42804.0 54 34377.5 55 25951.0 56 22560.5 57 19170.0 58 17850.5 59 16531.0 60 15271.0 61 14011.0 62 12268.0 63 10525.0 64 9044.5 65 7564.0 66 6410.5 67 5257.0 68 4769.5 69 4282.0 70 3760.5 71 3239.0 72 2935.5 73 2632.0 74 2081.0 75 1173.0 76 816.0 77 617.0 78 418.0 79 306.5 80 195.0 81 156.5 82 118.0 83 73.5 84 29.0 85 22.5 86 16.0 87 13.0 88 10.0 89 8.5 90 7.0 91 5.0 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1620678.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.098757160320385 #Duplication Level Percentage of deduplicated Percentage of total 1 81.0648763145811 15.482383869635925 2 6.808562677839612 2.600701703897589 3 2.6382507894279645 1.5116193346592477 4 1.5100920211949291 1.1536352321015737 5 1.0424938254635059 0.9955168206830465 6 0.7345971262110625 0.8417935274504585 7 0.6038002504181709 0.8072284049254099 8 0.4930551015373313 0.7533391720734882 9 0.4019510082770624 0.6909088227686591 >10 3.156906812089047 11.882621690834219 >50 0.4786049758537224 6.562644560354884 >100 0.9922297377342885 46.02607678071827 >500 0.0684184557718732 8.161967359318208 >1k 0.005512387431857082 1.6168492265797623 >5k 6.485161684537744E-4 0.9127134939992544 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9392 0.5795105505226825 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCG 5346 0.3298619466667654 No Hit GAATCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTTC 4025 0.24835284985666495 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGC 2525 0.1557989927672246 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2187 0.13494352363640402 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1792 0.11057100793618474 No Hit ATTTGCGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1668 0.10291988908345767 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0214107922733572 0.0 2 0.0 0.0 0.0 0.11501359307647786 0.0 3 0.0 0.0 0.0 0.15400961819682873 0.0 4 0.0 0.0 0.0 0.31221501124837875 0.0 5 0.0 0.0 0.0 0.7365435947177663 0.0 6 0.0 0.0 0.0 0.9118406000451663 0.0 7 0.0 0.0 0.0 1.098182365651906 0.0 8 0.0 0.0 0.0 1.4509359663054597 0.0 9 0.0 0.0 0.0 1.5704538470936238 0.0 10 0.0 0.0 0.0 2.1062789770700903 0.0 11 0.0 0.0 0.0 2.2506629941296175 0.0 12 0.0 0.0 0.0 2.559916281951134 0.0 13 0.0 0.0 0.0 2.6349466087649738 0.0 14 0.0 0.0 0.0 2.6651191661761313 0.0 15 0.0 0.0 0.0 2.730462189281276 0.0 16 0.0 0.0 0.0 2.8118478809485907 0.0 17 0.0 0.0 0.0 2.891752710902474 0.0 18 0.0 0.0 0.0 3.0189217105433652 0.0 19 0.0 0.0 0.0 3.095247791356457 0.0 20 0.0 0.0 0.0 3.1505332953245495 0.0 21 0.0 0.0 0.0 3.2281551301368934 0.0 22 0.0 0.0 0.0 3.312070627231319 0.0 23 0.0 0.0 0.0 3.403698945749865 0.0 24 0.0 0.0 0.0 3.478235651992561 0.0 25 0.0 0.0 0.0 3.5400616285283073 0.0 26 0.0 0.0 0.0 3.6096004264881736 0.0 27 0.0 0.0 0.0 3.6776583627346087 0.0 28 0.0 0.0 0.0 3.7462099195521876 0.0 29 0.0 0.0 0.0 3.8237083492217456 0.0 30 0.0 0.0 0.0 3.9414368554395134 0.0 31 0.0 0.0 0.0 4.040963103096359 0.0 32 0.0 0.0 0.0 4.134565903899479 0.0 33 0.0 0.0 0.0 4.221258016706588 0.0 34 0.0 0.0 0.0 4.312454417225384 0.0 35 0.0 0.0 0.0 4.436414883153841 0.0 36 0.0 0.0 0.0 4.536373048810436 0.0 37 0.0 0.0 0.0 4.646265328461299 0.0 38 0.0 0.0 0.0 4.743385175833818 0.0 39 0.0 0.0 0.0 4.841924182348375 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGC 35 1.2123382E-7 45.000004 21 CGAACCC 35 1.2123382E-7 45.000004 34 GTTTACG 125 0.0 45.000004 1 ATTACCG 90 0.0 45.000004 1 ATACTCC 70 0.0 45.000004 13 CGTTAGT 45 3.8562575E-10 45.000004 39 ATATCCG 35 1.2123382E-7 45.000004 1 ACGGCTA 45 3.8562575E-10 45.000004 30 TACACGA 35 1.2123382E-7 45.000004 21 GGTAGCG 35 1.2123382E-7 45.000004 1 GTTGCGT 35 1.2123382E-7 45.000004 18 AACCGCT 40 6.8175723E-9 45.0 31 AATCCGT 25 3.891517E-5 45.0 16 ATCTCGG 20 7.0341444E-4 45.0 45 CAACGAA 25 3.891517E-5 45.0 15 ACGCAAC 25 3.891517E-5 45.0 22 CGGCCCA 100 0.0 45.0 31 CGTTGTA 25 3.891517E-5 45.0 32 ATCCGAT 25 3.891517E-5 45.0 36 AACGGAC 20 7.0341444E-4 45.0 5 >>END_MODULE