##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545106_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1208439 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.023957353246626 31.0 31.0 33.0 30.0 33.0 2 31.344876323918708 31.0 31.0 33.0 30.0 34.0 3 31.50074683124262 31.0 31.0 34.0 30.0 34.0 4 35.36944520989475 37.0 35.0 37.0 33.0 37.0 5 35.27220736834875 37.0 35.0 37.0 33.0 37.0 6 35.35241745756302 37.0 35.0 37.0 33.0 37.0 7 35.66876441425674 37.0 35.0 37.0 35.0 37.0 8 35.74101878539173 37.0 35.0 37.0 35.0 37.0 9 37.594512424706586 39.0 37.0 39.0 35.0 39.0 10 37.13027964175271 39.0 37.0 39.0 33.0 39.0 11 36.70399664360386 39.0 35.0 39.0 32.0 39.0 12 35.37215366270039 35.0 35.0 39.0 31.0 39.0 13 34.92491304898303 35.0 35.0 39.0 30.0 39.0 14 35.54261654911833 36.0 34.0 40.0 30.0 41.0 15 35.9412912029486 36.0 35.0 40.0 31.0 41.0 16 36.144746238742705 35.0 35.0 40.0 32.0 41.0 17 36.0178519561186 35.0 35.0 40.0 32.0 41.0 18 36.11938624953349 36.0 35.0 40.0 32.0 41.0 19 35.98658600061732 36.0 35.0 40.0 31.0 41.0 20 35.707593018762225 35.0 34.0 40.0 31.0 41.0 21 35.57047066504805 35.0 34.0 40.0 31.0 41.0 22 35.4147697980618 35.0 34.0 40.0 30.0 41.0 23 35.349158708052286 35.0 34.0 40.0 30.0 41.0 24 35.44501708402327 35.0 34.0 40.0 31.0 41.0 25 35.323061404009636 35.0 34.0 39.0 31.0 41.0 26 35.11541501060459 35.0 34.0 39.0 30.0 41.0 27 35.100173033144415 35.0 34.0 39.0 30.0 41.0 28 35.22192183469749 36.0 34.0 39.0 30.0 41.0 29 35.22118286483637 36.0 34.0 39.0 30.0 41.0 30 35.19819618532669 36.0 34.0 39.0 30.0 41.0 31 34.93759966369837 35.0 34.0 39.0 29.0 41.0 32 34.76950512189693 35.0 34.0 39.0 29.0 41.0 33 34.5445595516199 35.0 34.0 40.0 27.0 41.0 34 34.35511846274409 35.0 34.0 39.0 27.0 41.0 35 34.144800854656296 35.0 33.0 39.0 26.0 41.0 36 33.87742947720158 35.0 33.0 39.0 23.0 41.0 37 33.862932262199415 35.0 33.0 39.0 24.0 41.0 38 33.90289207812724 35.0 33.0 39.0 25.0 41.0 39 33.8974859301959 35.0 33.0 39.0 24.0 41.0 40 33.56394985597122 35.0 33.0 39.0 23.0 41.0 41 33.645709878611996 35.0 33.0 39.0 23.0 41.0 42 33.650894252833616 35.0 33.0 39.0 23.0 41.0 43 33.6055663546112 35.0 33.0 39.0 23.0 41.0 44 33.563715669553865 35.0 33.0 39.0 23.0 41.0 45 33.60174075811853 35.0 33.0 39.0 23.0 41.0 46 33.63874965968493 35.0 33.0 39.0 23.0 41.0 47 33.59468289255808 35.0 33.0 39.0 23.0 41.0 48 33.639520075072056 35.0 33.0 39.0 23.0 41.0 49 33.696467922667175 35.0 33.0 39.0 24.0 41.0 50 33.44978108121303 35.0 33.0 39.0 24.0 41.0 51 33.15606166302147 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 0.0 13 2.0 14 9.0 15 33.0 16 82.0 17 190.0 18 542.0 19 1100.0 20 2049.0 21 3360.0 22 5366.0 23 8142.0 24 11707.0 25 16507.0 26 21388.0 27 24776.0 28 27323.0 29 30886.0 30 36800.0 31 46139.0 32 60356.0 33 82866.0 34 157456.0 35 237412.0 36 67578.0 37 83027.0 38 119594.0 39 163689.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.90095735076409 24.647499791052756 28.896535116791167 13.555007741391995 2 30.60353067055929 24.89111986620756 32.64922763995535 11.8561218232778 3 26.66299250520713 25.640681904506557 35.11836344242448 12.577962147861829 4 24.805554934920174 29.541168399894406 33.12993043091128 12.523346234274133 5 22.19632103896018 32.44557648338063 32.70971890182293 12.648383575836263 6 19.472807481387143 42.01776010208211 28.874688751356086 9.634743665174659 7 86.56407150050602 4.755556548572167 7.5722481647811755 1.1081237861406328 8 89.36892966877103 2.7422153704076084 6.7621121132303745 1.126742847590983 9 85.70668440856345 4.507964406974618 8.135288583039772 1.6500626014221653 10 60.8768833180657 20.495283584856168 12.67916709076751 5.948666006310621 11 55.50747700132154 16.476462610028307 19.96732975350845 8.048730635141698 12 51.61079706960798 19.318476149809797 20.910199025354196 8.160527755228026 13 17.645987923262986 52.53984686028835 20.361309093797868 9.452856122650791 14 10.100385704201868 52.859846463081716 26.86440937440781 10.175358458308612 15 8.823780099781619 22.074511001382778 58.88679527886803 10.214913619967577 16 9.461379515225842 15.922276589881657 58.382342840639865 16.234001054252637 17 9.892183221494838 16.106232917011116 31.74417575069987 42.257408110794174 18 15.141765533882968 21.31882536065122 46.56089384735183 16.97851525811398 19 33.1508665311199 19.474379757687394 29.154140175879796 18.220613535312914 20 34.30102802044621 18.983167540935042 30.051165180865564 16.664639257753183 21 16.510721683096953 34.620862120471116 32.481904341054864 16.386511855377062 22 18.917380190477136 24.152977518931447 22.46344250723454 34.46619978335688 23 12.047691277755849 34.175990678884084 26.290942281737017 27.485375761623054 24 10.591432418185775 19.849409030989566 56.356754457610194 13.20240409321447 25 10.030212530380101 24.06699883072294 50.83574760496806 15.067041033928897 26 9.397081689683965 41.36137612241909 31.191065498548127 18.05047668934882 27 9.837650059291366 49.84736507179924 27.31515616427474 12.999828704634655 28 8.797547910982681 35.16222167606309 43.47021239797789 12.570018014976345 29 9.62886831689477 23.881718481445898 43.18074805596311 23.308665145696224 30 13.508004955152888 42.992157651317115 30.146991283796698 13.352846109733301 31 32.10993686896897 30.4671563893585 26.720670220011105 10.702236521661417 32 36.34953853690588 21.08786624728265 30.908386770039698 11.654208445771777 33 37.176638622222555 26.02233128854663 22.054650669169067 14.74637942006175 34 19.59461751896455 25.986499939177733 24.8815207056376 29.537361836220118 35 17.656414597675184 23.857803331405226 37.54769582908198 20.93808624183761 36 38.61163037604712 24.535123411276864 24.32013531506348 12.53311089761254 37 16.49466791455754 44.51594164041379 27.934964032110848 11.054426412917822 38 16.107556939158698 42.56094018812699 23.861278889542625 17.470223983171678 39 18.58488512866599 41.03268762428223 27.101657592977386 13.28076965407439 40 29.3671422388718 23.778279251166172 25.346169728054125 21.5084087819079 41 13.915721025223448 23.485422102398218 28.24635749094493 34.352499381433404 42 16.2279602032043 20.04850886143198 26.867140170087193 36.85639076527652 43 16.661411953768457 20.278061201268745 29.91992148548665 33.14060535947615 44 12.019307552967092 29.401318560556224 37.05491133602937 21.524462550447314 45 11.149921510312064 51.79193984967384 22.765485059651336 14.292653580362765 46 18.163597831582727 43.23561222370348 24.434497728060748 14.166292216653053 47 17.413456533594164 29.767162430209552 24.987773482980938 27.83160755321535 48 17.859155489023443 25.962336534984388 41.40175879792029 14.776749178071876 49 22.33534336445613 24.95086636561713 40.40816292754537 12.30562734238137 50 18.766938173958305 43.85873014690853 25.01739847853305 12.356933200600114 51 15.831167315851276 40.2352952859019 24.694337074523414 19.239200323723416 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1801.0 1 2399.0 2 2997.0 3 6720.5 4 10444.0 5 8359.5 6 6275.0 7 6521.0 8 6767.0 9 6924.0 10 7081.0 11 7030.5 12 6980.0 13 6658.5 14 6337.0 15 6026.0 16 5715.0 17 5147.5 18 4580.0 19 5067.0 20 5554.0 21 5243.5 22 4933.0 23 6440.0 24 7947.0 25 9295.0 26 11851.0 27 13059.0 28 17338.0 29 21617.0 30 24933.0 31 28249.0 32 34867.0 33 41485.0 34 45497.5 35 49510.0 36 50834.5 37 52159.0 38 64711.5 39 77264.0 40 101772.0 41 126280.0 42 156294.0 43 186308.0 44 181007.0 45 175706.0 46 147398.5 47 119091.0 48 99225.5 49 79360.0 50 68600.0 51 57840.0 52 44035.0 53 30230.0 54 23050.0 55 15870.0 56 13087.5 57 10305.0 58 9787.5 59 9270.0 60 8277.0 61 7284.0 62 6476.5 63 5669.0 64 4984.5 65 4300.0 66 3653.0 67 3006.0 68 2646.5 69 2287.0 70 1979.5 71 1672.0 72 1416.0 73 1160.0 74 934.0 75 521.0 76 334.0 77 244.5 78 155.0 79 124.5 80 94.0 81 69.5 82 45.0 83 39.0 84 33.0 85 25.0 86 17.0 87 13.0 88 9.0 89 7.0 90 5.0 91 3.0 92 1.0 93 2.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1208439.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.015047600175347 #Duplication Level Percentage of deduplicated Percentage of total 1 80.00435779596916 13.612779561198748 2 7.220584770969052 2.4571718715827924 3 2.6918201773593284 1.3740434534664425 4 1.562036665566785 1.0631251287135208 5 1.0803961286534487 0.9191495778041798 6 0.7678974304046862 0.7839486798232842 7 0.6121149398901851 0.7290615387306979 8 0.46149190444893545 0.6281845377035368 9 0.42841979120308865 0.6560624826159963 >10 3.172672251438817 10.87468600461598 >50 0.5708468525046881 6.989112697162442 >100 1.3795058668309235 53.611447262482 >500 0.04248389749178419 4.913242283025227 >1k 0.0053715272690761625 1.3879849210751427 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4835 0.4001029427219744 No Hit TTTTTAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1511 0.12503734156213098 No Hit TTTTATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1311 0.10848706471737506 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1301 0.10765955087513727 No Hit AAGTATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1271 0.10517700934842389 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.020108586366378443 0.0 2 0.0 0.0 0.0 0.08531667713471677 0.0 3 0.0 0.0 0.0 0.11320389361813049 0.0 4 0.0 0.0 0.0 0.16575102260023056 0.0 5 0.0 0.0 0.0 0.2701832694906404 0.0 6 0.0 0.0 0.0 0.38438017971945626 0.0 7 0.0 0.0 0.0 0.46473177380074626 0.0 8 0.0 0.0 0.0 0.7095103683346863 0.0 9 0.0 0.0 0.0 0.8084810238663267 0.0 10 0.0 0.0 0.0 0.9603298139169623 0.0 11 0.0 0.0 0.0 1.0962075868124084 0.0 12 0.0 0.0 0.0 1.2124732816468187 0.0 13 0.0 0.0 0.0 1.259310565117478 0.0 14 0.0 0.0 0.0 1.2760263447306814 0.0 15 0.0 0.0 0.0 1.2987829753922209 0.0 16 0.0 0.0 0.0 1.3628325467814262 0.0 17 0.0 0.0 0.0 1.4422738756362548 0.0 18 0.0 0.0 0.0 1.5779861457632534 0.0 19 0.0 0.0 0.0 1.632105551045605 0.0 20 0.0 0.0 0.0 1.6926795642974117 0.0 21 0.0 0.0 0.0 1.7723691473049115 0.0 22 0.0 0.0 0.0 1.847672906948551 0.0 23 0.0 0.0 0.0 1.9462298055590725 0.0 24 0.0 0.0 0.0 2.020706051360474 0.0 25 0.0 0.0 0.0 2.080038793848924 0.0 26 0.0 0.0 0.0 2.142764343090549 0.0 27 0.0 0.0 0.0 2.202179836963223 0.0 28 0.0 0.0 0.0 2.272022005248093 0.0 29 0.0 0.0 0.0 2.3452569802861376 0.0 30 0.0 0.0 0.0 2.455481824072212 0.0 31 0.0 0.0 0.0 2.557266026667461 0.0 32 0.0 0.0 0.0 2.646637521629143 0.0 33 0.0 0.0 0.0 2.731209436305846 0.0 34 0.0 0.0 0.0 2.821904953415108 0.0 35 0.0 0.0 0.0 2.9645683398169043 0.0 36 0.0 0.0 0.0 3.0666007965648245 0.0 37 0.0 0.0 0.0 3.171198546223682 0.0 38 0.0 0.0 0.0 3.2658661297756857 0.0 39 0.0 0.0 0.0 3.372036155734795 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGT 80 0.0 45.000004 28 TCACGAC 40 6.8157533E-9 45.000004 25 CTCACGA 40 6.8157533E-9 45.000004 24 ACAGTCG 55 1.8189894E-12 45.000004 1 ACGTTCG 55 1.8189894E-12 45.000004 2 ACGTTCC 20 7.03343E-4 45.000004 12 TAGGTCG 20 7.03343E-4 45.000004 1 GTTAGAC 20 7.03343E-4 45.000004 39 TACGGAG 20 7.03343E-4 45.000004 4 TCGATAG 20 7.03343E-4 45.000004 1 AACGGTC 20 7.03343E-4 45.000004 42 AACGATT 20 7.03343E-4 45.000004 33 TCCAATC 20 7.03343E-4 45.000004 30 ACGTCAC 40 6.8157533E-9 45.000004 34 TCATACG 40 6.8157533E-9 45.000004 2 CACGTTC 20 7.03343E-4 45.000004 11 AGTAGCG 175 0.0 45.000004 1 CGCGTAG 20 7.03343E-4 45.000004 13 CACAACG 20 7.03343E-4 45.000004 1 TGTAACG 55 1.8189894E-12 45.000004 1 >>END_MODULE