##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545105_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2349195 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.8949005936076 31.0 31.0 33.0 30.0 33.0 2 31.20871915698782 31.0 31.0 33.0 30.0 34.0 3 31.305626821102546 31.0 31.0 34.0 28.0 34.0 4 35.19814106534366 37.0 35.0 37.0 33.0 37.0 5 35.12088055695674 37.0 35.0 37.0 32.0 37.0 6 35.195413748113715 37.0 35.0 37.0 32.0 37.0 7 35.551618320318234 36.0 35.0 37.0 35.0 37.0 8 35.59492592143266 37.0 35.0 37.0 35.0 37.0 9 37.39337049499935 39.0 37.0 39.0 35.0 39.0 10 36.90657182566794 39.0 37.0 39.0 32.0 39.0 11 36.56233688561401 38.0 35.0 39.0 32.0 39.0 12 35.5096196782302 37.0 35.0 39.0 31.0 39.0 13 35.152590142580756 37.0 35.0 39.0 30.0 39.0 14 35.872390755131015 37.0 35.0 40.0 30.0 41.0 15 36.22230593884288 37.0 35.0 40.0 31.0 41.0 16 36.324965786152276 37.0 35.0 40.0 32.0 41.0 17 36.144210250745466 37.0 35.0 40.0 31.0 41.0 18 36.20680956668135 37.0 35.0 40.0 31.0 41.0 19 36.06753292085161 36.0 35.0 40.0 31.0 41.0 20 35.78476541964375 36.0 34.0 40.0 31.0 41.0 21 35.67830256747524 35.0 34.0 40.0 30.0 41.0 22 35.5059081940835 35.0 34.0 40.0 30.0 41.0 23 35.39389620699857 35.0 34.0 40.0 30.0 41.0 24 35.44661979954836 35.0 34.0 40.0 30.0 41.0 25 35.30923146013847 35.0 34.0 40.0 30.0 41.0 26 35.08532880412226 35.0 34.0 39.0 29.0 41.0 27 35.08092176256122 35.0 34.0 40.0 29.0 41.0 28 35.10729845755674 36.0 34.0 40.0 29.0 41.0 29 35.04361068365972 36.0 34.0 40.0 29.0 41.0 30 34.98979011959416 36.0 34.0 40.0 29.0 41.0 31 34.7721900480803 35.0 34.0 40.0 28.0 41.0 32 34.59184444032956 35.0 34.0 40.0 27.0 41.0 33 34.30468139085942 35.0 33.0 40.0 25.0 41.0 34 34.030255044813224 35.0 33.0 40.0 24.0 41.0 35 33.790149817277836 35.0 33.0 40.0 23.0 41.0 36 33.55758674780084 35.0 33.0 40.0 22.0 41.0 37 33.58779965051858 35.0 33.0 40.0 23.0 41.0 38 33.573579034520336 35.0 33.0 40.0 23.0 41.0 39 33.54191457073593 35.0 33.0 40.0 23.0 41.0 40 33.27812718824959 35.0 32.0 40.0 21.0 41.0 41 33.28181866554288 35.0 32.0 39.0 21.0 41.0 42 33.237798054227085 35.0 32.0 39.0 21.0 41.0 43 33.18192487213705 35.0 32.0 39.0 21.0 41.0 44 33.14392036420987 35.0 32.0 39.0 20.0 41.0 45 33.18207428502104 35.0 32.0 39.0 21.0 41.0 46 33.18878254040214 35.0 32.0 39.0 21.0 41.0 47 33.09710092180513 35.0 32.0 39.0 20.0 41.0 48 33.12805322674363 35.0 32.0 39.0 20.0 41.0 49 33.14829462858554 35.0 32.0 39.0 20.0 41.0 50 32.94303878562656 35.0 32.0 39.0 20.0 41.0 51 32.65093872581885 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 5.0 12 4.0 13 4.0 14 27.0 15 58.0 16 224.0 17 620.0 18 1554.0 19 3274.0 20 5658.0 21 9329.0 22 14054.0 23 20616.0 24 28844.0 25 39846.0 26 51018.0 27 56836.0 28 60553.0 29 66280.0 30 76309.0 31 92069.0 32 115744.0 33 151630.0 34 263630.0 35 383584.0 36 146673.0 37 176997.0 38 253073.0 39 330556.0 40 121.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.30958051587884 21.788995804945948 28.726095534853428 16.175328144321778 2 32.61393796598409 25.721406694633693 29.743593018033838 11.921062321348378 3 29.010065149976903 24.979407839706795 33.73811028884363 12.272416721472675 4 25.31216012293573 27.50282543594721 33.82814112919532 13.356873311921744 5 22.424958336791963 32.65386653726063 32.62343057941124 12.297744546536155 6 20.253320818408007 40.20109016067206 30.77986288920247 8.76572613171746 7 83.52388797013445 5.160789121379876 9.825152871515561 1.490170036970111 8 84.84114771230145 3.9822151843503835 9.469073448564295 1.7075636547838728 9 79.88259808147046 6.365925348896111 11.27309567745547 2.4783808921779586 10 52.01466885465022 22.4218508893472 17.116033364620648 8.447446891381942 11 48.15683670363678 18.990803232596697 23.043212674980154 9.809147388786371 12 44.27112266116691 21.25311010793059 24.408318594241855 10.067448636660643 13 18.540947005250736 46.83319179548739 22.987023214335125 11.638837984926752 14 11.95711722526227 46.68148025174581 27.939868763555175 13.421533759436743 15 11.32519863187177 23.31130451069409 53.26437354072352 12.099123316710617 16 11.589501935769487 18.632595420984636 51.3541447176586 18.423757925587275 17 11.659398219390047 19.33670895774936 33.51777949467796 35.48611332818263 18 16.287366523426112 23.460845098001656 43.02422744812585 17.227560930446387 19 31.383388777857945 21.260261493830864 29.406115711977932 17.950234016333255 20 30.942173808474816 21.73186985329017 30.993084865241073 16.33287147299394 21 17.11871513433325 33.84670067831747 31.48955280425848 17.5450313830908 22 18.577980967948594 25.79751787314378 24.741922232935114 30.882578925972513 23 14.755224662065093 32.735596661835224 28.139724458803972 24.36945421729571 24 12.569454642973444 22.20352078052269 51.91301701221056 13.3140075642933 25 12.110701751025351 26.6435097980372 45.299347223197735 15.946441227739715 26 11.36912857383061 39.8485012951245 30.682340120764774 18.100030010280115 27 11.590183020140941 45.34089336985648 28.867718516342833 14.201205093659745 28 11.270413907742865 33.25130523434623 41.62740853781827 13.850872320092627 29 11.568601159120465 25.957189590476737 40.26689993806389 22.207309312338907 30 15.448909094391908 39.88493930899734 30.14888078682272 14.517270809788032 31 29.3536722153759 30.43438284178197 27.503336249225796 12.708608693616325 32 32.51930980612508 24.22570284714551 29.65449866869289 13.600488678036518 33 31.932470484570246 27.820636430777352 23.49770878960665 16.74918429504575 34 18.124634183198925 27.05199014981728 27.540583050789742 27.282792616194058 35 18.86786750354909 25.176539197469772 35.32980446493374 20.625788834047405 36 32.912636030640286 28.836942016307717 24.730130959754298 13.520290993297705 37 16.028341623407165 43.17593899186743 27.917052437111433 12.87866694761397 38 16.002460417291882 41.08718092793489 25.838808613163234 17.07155004161 39 19.246635549624447 39.02839057634637 27.328382701308318 14.396591172720868 40 25.917175883653766 26.19216369862868 27.27410879045801 20.61655162725955 41 14.636120032606915 25.856389103501414 28.88329832133986 30.62419254255181 42 15.958062229827663 23.965188075064013 27.051819878724416 33.02492981638391 43 16.849048291010323 23.8654943501923 29.748020066448294 29.537437292349082 44 13.20707731797488 31.417442996430694 34.45576037749101 20.919719308103417 45 12.323923727063951 47.51734104661384 24.580803211312812 15.577932015009397 46 17.07729669099415 41.58590495893274 25.038704747796587 16.298093602276527 47 16.925287172840058 30.221756814568394 27.532750580518005 25.32020543207354 48 17.14855514335762 27.595069800506135 38.99872083841486 16.25765421772139 49 20.355866584085184 28.972392670680808 36.87505720044526 13.796683544788745 50 17.645023082375026 41.91580520135621 26.382101102718163 14.057070613550598 51 16.824061008132574 36.89191403863877 26.4575311968568 19.826493756371864 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4388.0 1 5405.0 2 6422.0 3 19313.5 4 32205.0 5 24793.0 6 17381.0 7 17531.0 8 17681.0 9 18108.5 10 18536.0 11 18332.5 12 18129.0 13 17822.0 14 17515.0 15 16314.0 16 15113.0 17 14778.5 18 14444.0 19 13657.5 20 12871.0 21 13740.0 22 14609.0 23 14543.0 24 14477.0 25 17379.0 26 27222.5 27 34164.0 28 41409.0 29 48654.0 30 59293.5 31 69933.0 32 80887.0 33 91841.0 34 93692.5 35 95544.0 36 103459.0 37 111374.0 38 123472.0 39 135570.0 40 184863.5 41 234157.0 42 271405.0 43 308653.0 44 293153.0 45 277653.0 46 241623.0 47 205593.0 48 173832.5 49 142072.0 50 122499.5 51 102927.0 52 83124.5 53 63322.0 54 51275.0 55 39228.0 56 35976.0 57 32724.0 58 30825.5 59 28927.0 60 27439.5 61 25952.0 62 23372.5 63 20793.0 64 17801.5 65 14810.0 66 12882.0 67 10954.0 68 10266.5 69 9579.0 70 8685.0 71 7791.0 72 6725.0 73 5659.0 74 4637.0 75 2685.0 76 1755.0 77 1349.0 78 943.0 79 707.5 80 472.0 81 369.5 82 267.0 83 193.0 84 119.0 85 87.0 86 55.0 87 41.0 88 27.0 89 18.5 90 10.0 91 7.5 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2349195.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.961822715896787 #Duplication Level Percentage of deduplicated Percentage of total 1 80.8179500799161 14.516376915976496 2 6.657909053860325 2.391763641680065 3 2.525245366614979 1.3607402876783412 4 1.4463882016446326 1.0391907382522265 5 0.9887741176562279 0.8880092703704219 6 0.7314920093857348 0.7883357874409007 7 0.6238176824496771 0.7843431833441888 8 0.46298834083584567 0.6652891598096525 9 0.41857038470489566 0.6766458339774648 >10 3.782593859272613 13.840916404667711 >50 0.511597396674456 6.48963257747018 >100 0.8957444233176324 39.3957018981342 >500 0.12646922310904285 13.827533750599988 >1k 0.010222136454302335 2.626024295429741 >5k 0.0 0.0 >10k+ 2.3772410358842641E-4 0.7094962551684647 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16616 0.7073061197559164 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3715 0.1581392774971852 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3439 0.14639057208958814 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3198 0.13613173874454867 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2364 0.10063021588246185 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.013579119655882122 0.0 2 0.0 0.0 0.0 0.052145522189515986 0.0 3 0.0 0.0 0.0 0.07947403259414396 0.0 4 0.0 0.0 0.0 0.1318323936497396 0.0 5 0.0 0.0 0.0 0.23595316693590784 0.0 6 0.0 0.0 0.0 0.3926877079169673 0.0 7 0.0 0.0 0.0 0.5113240918697681 0.0 8 0.0 0.0 0.0 0.8560379193723807 0.0 9 0.0 0.0 0.0 0.9953622411081243 0.0 10 0.0 0.0 0.0 1.1944091486658195 0.0 11 0.0 0.0 0.0 1.3308814295960958 0.0 12 0.0 0.0 0.0 1.456115818397366 0.0 13 0.0 0.0 0.0 1.5077505273082907 0.0 14 0.0 0.0 0.0 1.5272891352144031 0.0 15 0.0 0.0 0.0 1.5538514257011444 0.0 16 0.0 0.0 0.0 1.6123395460998342 0.0 17 0.0 0.0 0.0 1.6796391955542218 0.0 18 0.0 0.0 0.0 1.7938059633193497 0.0 19 0.0 0.0 0.0 1.838970370701453 0.0 20 0.0 0.0 0.0 1.887369928847967 0.0 21 0.0 0.0 0.0 1.956329721457776 0.0 22 0.0 0.0 0.0 2.0255023529336644 0.0 23 0.0 0.0 0.0 2.1129365591191878 0.0 24 0.0 0.0 0.0 2.1806193185325187 0.0 25 0.0 0.0 0.0 2.234339848331024 0.0 26 0.0 0.0 0.0 2.2924022909975545 0.0 27 0.0 0.0 0.0 2.3483363450032884 0.0 28 0.0 0.0 0.0 2.40963393843423 0.0 29 0.0 0.0 0.0 2.4800836031065963 0.0 30 0.0 0.0 0.0 2.5842043763927642 0.0 31 0.0 0.0 0.0 2.683983236810908 0.0 32 0.0 0.0 0.0 2.7734606961107953 0.0 33 0.0 0.0 0.0 2.858809081408738 0.0 34 0.0 0.0 0.0 2.952458182483787 0.0 35 0.0 0.0 0.0 3.0713499730758835 0.0 36 0.0 0.0 0.0 3.172746408876232 0.0 37 0.0 0.0 0.0 3.2748239290480354 0.0 38 0.0 0.0 0.0 3.3780507790966694 0.0 39 0.0 0.0 0.0 3.4803837059077685 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATG 135 0.0 45.000004 1 TGTTCGA 60 0.0 45.000004 21 ATCGGCA 60 0.0 45.000004 33 GACTCGA 30 2.1664728E-6 45.000004 28 ACGCGAT 20 7.0347916E-4 45.0 42 TCGCACC 20 7.0347916E-4 45.0 45 TAACGAC 20 7.0347916E-4 45.0 32 ACGATTG 20 7.0347916E-4 45.0 29 CGACTTA 20 7.0347916E-4 45.0 11 ACTCACG 45 3.8562575E-10 45.0 17 TAAGCGA 40 6.8212103E-9 45.0 2 TCTCGAT 65 0.0 44.999996 27 CTCGATA 65 0.0 44.999996 28 ACGGGCT 285 0.0 42.63158 5 TATAGCG 175 0.0 42.42857 1 GTACGCG 85 0.0 42.35294 1 CAACCGT 80 0.0 42.1875 37 CGTTTTT 13860 0.0 42.142857 1 GCGATAT 150 0.0 42.0 9 AGGGATC 1300 0.0 41.884617 6 >>END_MODULE