##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545104_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4275355 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.834781439202125 31.0 31.0 33.0 28.0 33.0 2 31.1581143554161 31.0 31.0 33.0 30.0 34.0 3 31.253425505016544 31.0 31.0 34.0 28.0 34.0 4 35.12950877763367 35.0 35.0 37.0 32.0 37.0 5 35.02233218060255 37.0 35.0 37.0 32.0 37.0 6 35.0942010663442 37.0 35.0 37.0 32.0 37.0 7 35.51414981913783 36.0 35.0 37.0 35.0 37.0 8 35.572820034827515 37.0 35.0 37.0 35.0 37.0 9 37.3726658955806 39.0 37.0 39.0 35.0 39.0 10 36.89353679402061 39.0 37.0 39.0 32.0 39.0 11 36.459569556212294 38.0 35.0 39.0 32.0 39.0 12 35.25230396072373 35.0 35.0 39.0 31.0 39.0 13 34.813992054460975 35.0 34.0 39.0 30.0 39.0 14 35.45934314226538 36.0 33.0 40.0 27.0 41.0 15 35.893877818333216 36.0 34.0 40.0 30.0 41.0 16 36.04556019324711 36.0 34.0 40.0 31.0 41.0 17 35.88081059935374 36.0 34.0 40.0 31.0 41.0 18 35.93414862625443 36.0 35.0 40.0 31.0 41.0 19 35.80644578052583 36.0 35.0 40.0 30.0 41.0 20 35.528396823187784 35.0 34.0 40.0 30.0 41.0 21 35.387531561706574 35.0 34.0 40.0 30.0 41.0 22 35.219619189517594 35.0 34.0 40.0 29.0 41.0 23 35.152221043632636 35.0 34.0 40.0 29.0 41.0 24 35.238634920375034 35.0 34.0 40.0 30.0 41.0 25 35.12652516574647 35.0 34.0 39.0 29.0 41.0 26 34.8388040291391 35.0 34.0 39.0 29.0 41.0 27 34.8024678652416 35.0 34.0 39.0 29.0 41.0 28 34.872111906496656 36.0 34.0 39.0 29.0 41.0 29 34.84077649692248 36.0 34.0 39.0 29.0 41.0 30 34.79961547052818 36.0 34.0 39.0 29.0 41.0 31 34.56193392127671 35.0 34.0 39.0 27.0 41.0 32 34.38981534866695 35.0 34.0 39.0 26.0 41.0 33 34.11316908186571 35.0 33.0 40.0 25.0 41.0 34 33.85804734343698 35.0 33.0 39.0 23.0 41.0 35 33.61374295233963 35.0 33.0 39.0 23.0 41.0 36 33.384617651633604 35.0 33.0 39.0 22.0 41.0 37 33.41249627223938 35.0 33.0 39.0 23.0 41.0 38 33.42047923505768 35.0 32.0 39.0 23.0 41.0 39 33.407529199329645 35.0 33.0 39.0 23.0 41.0 40 33.13014311092295 35.0 32.0 39.0 21.0 41.0 41 33.14386103610109 35.0 32.0 39.0 22.0 41.0 42 33.12000851391288 35.0 32.0 39.0 22.0 41.0 43 33.066717032854584 35.0 32.0 39.0 21.0 41.0 44 33.02896414449794 35.0 32.0 39.0 21.0 41.0 45 33.10264691470065 35.0 32.0 39.0 22.0 41.0 46 33.11628975839433 35.0 32.0 39.0 23.0 41.0 47 33.018258132950365 35.0 32.0 39.0 22.0 41.0 48 33.0353558944228 35.0 32.0 39.0 22.0 41.0 49 33.08850376167593 35.0 32.0 39.0 22.0 41.0 50 32.93630493842032 35.0 32.0 39.0 21.0 41.0 51 32.65782513966676 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 8.0 11 5.0 12 18.0 13 27.0 14 58.0 15 144.0 16 431.0 17 1413.0 18 3252.0 19 6500.0 20 11237.0 21 18021.0 22 26662.0 23 38462.0 24 53862.0 25 73910.0 26 93508.0 27 106266.0 28 113133.0 29 125428.0 30 147106.0 31 177296.0 32 220733.0 33 289168.0 34 504038.0 35 714783.0 36 261459.0 37 310449.0 38 432580.0 39 545206.0 40 188.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.169879460302123 24.344855573396828 28.764699071772988 15.720565894528058 2 33.42492026977877 26.00467095714859 28.636358852071936 11.934049921000712 3 28.459578210464393 24.550546095002638 33.94190657851804 13.047969116014926 4 25.86360664786901 27.85237717101855 33.1344414674337 13.149574713678746 5 22.795042750835893 32.56248896290484 32.03303585316307 12.609432433096199 6 21.22696243937638 39.73896904467582 29.929982422512282 9.104086093435516 7 83.66636220851835 5.383576334596777 9.41809510555264 1.5319663513322284 8 85.29483516573477 3.9559989755236695 9.239747342618331 1.5094185161232225 9 80.31814901920426 6.183229228917832 10.961358764359918 2.5372629875179955 10 56.35482901419883 20.585846087634827 15.85007560775655 7.209249290409803 11 51.79361713822595 18.44139258611273 21.894953752378456 7.870036523282862 12 46.668148025134755 21.667557430903397 22.585609849942283 9.078684694019561 13 18.56168669034501 47.125583723456884 23.000709882571154 11.31201970362695 14 11.274174893079055 47.82234457723394 28.951163119787715 11.952317409899296 15 10.790332030907376 24.019806542380692 54.395436168458524 10.794425258253408 16 12.16146963234632 18.970681966760655 52.99414902388223 15.873699377010798 17 12.474238981324358 19.856900771982676 31.30313155281842 36.365728693874544 18 16.82938609776264 23.730941641103488 43.36128812695086 16.07838413418301 19 32.448065716180295 20.304957132214753 29.241735481614977 18.005241669989978 20 31.674071509851228 22.736451125111248 30.379956752129356 15.209520612908168 21 17.957923961869835 34.06921764391495 32.10608241888686 15.866775975328364 22 19.548598888279454 25.157489845872448 25.055790688726432 30.238120577121663 23 14.62276232032194 33.4706942464427 28.330676633870173 23.5758667993652 24 11.985180178020304 22.292721890930693 52.413238198933186 13.308859732115813 25 12.119297695746903 26.193240093512703 46.478175496537716 15.20928671420268 26 11.529662449083174 40.8100847765858 30.23236666896667 17.427886105364347 27 11.924974651227792 46.67086125011841 28.94533904202107 12.458825056632724 28 10.63612261437939 33.77190899936964 42.56507354360048 13.026894842650494 29 11.142653650983368 26.536229155239738 42.01089734068867 20.310219853088224 30 15.353344926912502 40.91363173350517 29.713134932654718 14.019888406927612 31 30.9427872071442 30.066649436128696 26.72168743882087 12.268875917906232 32 33.93060927104299 23.947204384197335 29.71800002572886 12.404186319030817 33 33.368129664086375 27.723475594424325 23.13793825308074 15.770456488408566 34 18.973418581614858 27.175029909796965 26.901064356059322 26.950487152528858 35 19.408633902915664 25.18055225823353 35.47803632680795 19.93277751204286 36 34.931882849494365 27.698261313972754 24.19602582709506 13.173830009437811 37 16.682404151234227 43.07967408554377 28.083960279321836 12.153961483900169 38 16.44817798755893 42.41844244513029 24.04766387820427 17.085715689106518 39 19.91425273456824 39.48182080786274 26.404520794179664 14.199405663389356 40 27.21680421859705 25.653284931894543 25.934197277185167 21.195713572323232 41 14.343066248299849 25.173628856551094 28.558447193274013 31.924857701875048 42 16.120205222724195 23.543846066583946 26.60819978691828 33.72774892377358 43 17.016247773576698 23.196155640876608 30.081010816645637 29.70658576890106 44 13.048857931095782 30.810587658802604 35.09032583259168 21.050228577509937 45 12.17276693982137 49.22849681488437 23.590134620399944 15.008601624894307 46 17.893812326695677 41.407649189365564 24.813799088028947 15.884739395909813 47 17.528228650018537 29.353024485685985 26.86466971748545 26.25407714681003 48 17.154692417354816 28.205002859411678 39.385337591849094 15.254967131384412 49 20.733389391056413 28.313438299275735 37.37836974941262 13.57480256025523 50 18.03515731442184 42.33854264733572 25.719010468136567 13.907289570105874 51 16.132601854115038 39.21260339784649 25.49856093821449 19.15623380982398 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5811.0 1 9120.5 2 12430.0 3 35480.5 4 58531.0 5 44792.5 6 31054.0 7 31502.0 8 31950.0 9 33897.5 10 35845.0 11 35167.0 12 34489.0 13 33630.5 14 32772.0 15 30936.5 16 29101.0 17 28851.5 18 28602.0 19 27322.5 20 26043.0 21 26705.5 22 27368.0 23 29143.0 24 30918.0 25 37500.0 26 51234.5 27 58387.0 28 70843.5 29 83300.0 30 100558.5 31 117817.0 32 124368.5 33 130920.0 34 153978.0 35 177036.0 36 185144.0 37 193252.0 38 220359.0 39 247466.0 40 342878.0 41 438290.0 42 515410.5 43 592531.0 44 545957.5 45 499384.0 46 436925.5 47 374467.0 48 320404.5 49 266342.0 50 220802.5 51 175263.0 52 141816.0 53 108369.0 54 91067.0 55 73765.0 56 66977.0 57 60189.0 58 59488.0 59 58787.0 60 54658.0 61 50529.0 62 45127.0 63 39725.0 64 34445.5 65 29166.0 66 25116.5 67 21067.0 68 18167.5 69 15268.0 70 13890.0 71 12512.0 72 10883.5 73 9255.0 74 7580.5 75 4598.0 76 3290.0 77 2687.0 78 2084.0 79 1526.0 80 968.0 81 732.5 82 497.0 83 395.5 84 294.0 85 209.5 86 125.0 87 103.5 88 82.0 89 45.5 90 9.0 91 9.0 92 9.0 93 8.0 94 7.0 95 3.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4275355.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.299787769344054 #Duplication Level Percentage of deduplicated Percentage of total 1 81.01630379276241 13.205485576787309 2 7.619324703138268 2.4838675121374827 3 2.5554090060572814 1.2495787338781235 4 1.2880240172117305 0.8397807248947665 5 0.7711435058201637 0.6284737742288299 6 0.6127855943255197 0.5992965081370399 7 0.45104248040347195 0.5146327693874581 8 0.3878478913204988 0.5057470652249398 9 0.3065220408470109 0.44966197911892375 >10 3.252319656451128 11.574087241332084 >50 0.6062156949674647 6.960378500111723 >100 0.945087254650422 38.07840532768833 >500 0.16599582125161821 17.16995502970952 >1k 0.02168934946667485 4.839873817173111 >5k 1.445956631111657E-4 0.1563081901499972 >10k+ 1.445956631111657E-4 0.7444672500404043 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31587 0.7388158410237279 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 6632 0.1551216214793859 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3389870548761448E-5 0.0 0.0 0.022150207409677092 0.0 2 2.3389870548761448E-5 0.0 0.0 0.07585335018963338 0.0 3 2.3389870548761448E-5 0.0 0.0 0.10953476377984986 0.0 4 2.3389870548761448E-5 0.0 0.0 0.1594955272720043 0.0 5 2.3389870548761448E-5 0.0 0.0 0.29045541247451967 0.0 6 2.3389870548761448E-5 0.0 0.0 0.42230411275788793 0.0 7 2.3389870548761448E-5 0.0 0.0 0.5160974936584214 0.0 8 2.3389870548761448E-5 0.0 0.0 0.6878259232274279 0.0 9 2.3389870548761448E-5 0.0 0.0 0.7550484111845683 0.0 10 2.3389870548761448E-5 0.0 0.0 0.8510170500461365 0.0 11 2.3389870548761448E-5 0.0 0.0 0.97294844521683 0.0 12 2.3389870548761448E-5 0.0 0.0 1.0599821535287712 0.0 13 2.3389870548761448E-5 0.0 0.0 1.0999788321671533 0.0 14 2.3389870548761448E-5 0.0 0.0 1.1177083540431145 0.0 15 2.3389870548761448E-5 0.0 0.0 1.1427822952713869 0.0 16 2.3389870548761448E-5 0.0 0.0 1.1972573037794523 0.0 17 2.3389870548761448E-5 0.0 0.0 1.2595679189213527 0.0 18 2.3389870548761448E-5 0.0 0.0 1.3503907862621933 0.0 19 2.3389870548761448E-5 0.0 0.0 1.3961413730555707 0.0 20 2.3389870548761448E-5 0.0 0.0 1.4489557007546743 0.0 21 2.3389870548761448E-5 0.0 0.0 1.5223765044072364 0.0 22 2.3389870548761448E-5 0.0 0.0 1.6048257980916205 0.0 23 2.3389870548761448E-5 0.0 0.0 1.699507994073007 0.0 24 2.3389870548761448E-5 0.0 0.0 1.7719698130330697 0.0 25 2.3389870548761448E-5 0.0 0.0 1.8341634788222265 0.0 26 2.3389870548761448E-5 0.0 0.0 1.9037717335753406 0.0 27 2.3389870548761448E-5 0.0 0.0 1.9721871049304678 0.0 28 2.3389870548761448E-5 0.0 0.0 2.041959088777423 0.0 29 2.3389870548761448E-5 0.0 0.0 2.1252504178015625 0.0 30 2.3389870548761448E-5 0.0 0.0 2.2321421262094026 0.0 31 2.3389870548761448E-5 0.0 0.0 2.330145683808713 0.0 32 2.3389870548761448E-5 0.0 0.0 2.4152848126062048 0.0 33 2.3389870548761448E-5 0.0 0.0 2.501523265319488 0.0 34 2.3389870548761448E-5 0.0 0.0 2.599292924213311 0.0 35 2.3389870548761448E-5 0.0 0.0 2.7321006091891786 0.0 36 2.3389870548761448E-5 0.0 0.0 2.836676720412691 0.0 37 2.3389870548761448E-5 0.0 0.0 2.946094534839797 0.0 38 2.3389870548761448E-5 0.0 0.0 3.0615703257390323 0.0 39 2.3389870548761448E-5 0.0 0.0 3.240035038026082 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 25 3.8925922E-5 45.000004 39 CGATCCA 20 7.0354406E-4 45.000004 30 GTACGAT 20 7.0354406E-4 45.000004 27 CGTATCA 45 3.8562575E-10 45.0 37 CGTTCGA 95 0.0 45.0 14 GTATGCG 95 0.0 45.0 1 TGTTACG 170 0.0 43.676468 1 CGTTAGG 505 0.0 43.217823 2 CGTTTTT 20925 0.0 42.731182 1 ACGTTAG 190 0.0 42.63158 1 TAATGCG 175 0.0 42.428574 1 GCGATCG 85 0.0 42.35294 9 TAATACG 140 0.0 41.785713 1 TCTAGCG 210 0.0 41.785713 1 ACTACGG 200 0.0 41.625004 2 TACGGGC 360 0.0 41.25 4 ACGGGCC 235 0.0 41.17021 5 CTATGCG 105 0.0 40.714283 1 GACCGAT 755 0.0 40.5298 9 CGTAGAT 50 1.0822987E-9 40.500004 27 >>END_MODULE