SRR1545102_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545102_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	765726
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3756	0.4905148839140894	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGATAT	75	0.0	45.000004	11
ACAACGG	45	3.8380676E-10	45.0	2
CTGCTCG	25	3.889581E-5	45.0	10
CTTCGAT	20	7.03181E-4	45.0	11
CGGAATC	25	3.889581E-5	45.0	15
CGGCGCT	20	7.03181E-4	45.0	10
CGAACGG	40	6.8102963E-9	45.0	2
GCGACCT	45	3.8380676E-10	45.0	11
GCGACCC	40	6.8102963E-9	45.0	31
GTCGAAA	25	3.889581E-5	45.0	19
CTCCGCC	25	3.889581E-5	45.0	45
GAAGACG	40	6.8102963E-9	45.0	1
CACGGGC	20	7.03181E-4	45.0	4
CACGGGA	90	0.0	45.0	4
TCCGATA	25	3.889581E-5	45.0	10
ACGTTCA	20	7.03181E-4	45.0	21
CCGATCA	35	1.2112105E-7	45.0	1
ACGTTAG	25	3.889581E-5	45.0	1
GCGCGAC	40	6.8102963E-9	45.0	9
GCAACGA	20	7.03181E-4	45.0	9