##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545100_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4628446 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.94998602122613 31.0 31.0 33.0 30.0 33.0 2 31.274396633340867 31.0 31.0 33.0 30.0 34.0 3 31.392097693264652 31.0 31.0 34.0 30.0 34.0 4 35.26113581102599 37.0 35.0 37.0 33.0 37.0 5 35.166513987632136 37.0 35.0 37.0 32.0 37.0 6 35.235849570244525 37.0 35.0 37.0 32.0 37.0 7 35.62347556825768 36.0 35.0 37.0 35.0 37.0 8 35.693875006859756 37.0 35.0 37.0 35.0 37.0 9 37.54092777575886 39.0 37.0 39.0 35.0 39.0 10 37.01431733242648 39.0 37.0 39.0 33.0 39.0 11 36.60175531917192 39.0 35.0 39.0 32.0 39.0 12 35.535428953908074 37.0 35.0 39.0 31.0 39.0 13 35.154432394803784 37.0 35.0 39.0 30.0 39.0 14 35.867152603703275 37.0 35.0 40.0 30.0 41.0 15 36.23505427091512 37.0 35.0 40.0 31.0 41.0 16 36.36819679866633 37.0 35.0 40.0 32.0 41.0 17 36.17710868831569 37.0 35.0 40.0 31.0 41.0 18 36.231734150079745 36.0 35.0 40.0 31.0 41.0 19 36.14685728212017 36.0 35.0 40.0 31.0 41.0 20 35.940396625562876 36.0 34.0 40.0 31.0 41.0 21 35.80792257271663 36.0 34.0 40.0 31.0 41.0 22 35.63872323453703 35.0 34.0 40.0 30.0 41.0 23 35.538791637625245 35.0 34.0 40.0 30.0 41.0 24 35.6377879314137 35.0 34.0 40.0 30.0 41.0 25 35.50961251357367 35.0 34.0 40.0 30.0 41.0 26 35.258289931437034 35.0 34.0 40.0 30.0 41.0 27 35.26576220182757 35.0 34.0 40.0 30.0 41.0 28 35.31920195244797 36.0 34.0 40.0 30.0 41.0 29 35.32960587635677 36.0 34.0 40.0 30.0 41.0 30 35.30492242968806 36.0 34.0 40.0 30.0 41.0 31 35.103456106001886 36.0 34.0 40.0 29.0 41.0 32 34.94856243326594 35.0 34.0 40.0 29.0 41.0 33 34.70240638002474 35.0 34.0 40.0 27.0 41.0 34 34.49337120925684 35.0 34.0 40.0 26.0 41.0 35 34.256989927072716 35.0 33.0 40.0 25.0 41.0 36 34.06290102552779 35.0 33.0 40.0 23.0 41.0 37 34.10731225988161 35.0 33.0 40.0 24.0 41.0 38 34.099120093439566 35.0 33.0 40.0 24.0 41.0 39 34.08561620898245 35.0 33.0 40.0 24.0 41.0 40 33.82650397131132 35.0 33.0 40.0 23.0 41.0 41 33.846248395249724 35.0 33.0 40.0 23.0 41.0 42 33.83835244053836 35.0 33.0 40.0 23.0 41.0 43 33.783283633426855 35.0 33.0 40.0 23.0 41.0 44 33.76098262786257 35.0 33.0 40.0 23.0 41.0 45 33.793659902265254 35.0 33.0 40.0 23.0 41.0 46 33.82270831289811 35.0 33.0 40.0 23.0 41.0 47 33.76337846439172 35.0 33.0 40.0 23.0 41.0 48 33.77869483623661 35.0 33.0 39.0 23.0 41.0 49 33.83650300770496 36.0 33.0 39.0 24.0 41.0 50 33.66498042755603 35.0 33.0 39.0 24.0 41.0 51 33.39084262838974 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 6.0 11 9.0 12 6.0 13 16.0 14 36.0 15 103.0 16 281.0 17 864.0 18 2213.0 19 4640.0 20 8258.0 21 13721.0 22 21192.0 23 32644.0 24 46653.0 25 66349.0 26 85679.0 27 97144.0 28 104826.0 29 118765.0 30 142848.0 31 176645.0 32 225960.0 33 299377.0 34 527558.0 35 763962.0 36 299823.0 37 366008.0 38 527551.0 39 695101.0 40 201.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.300959328465755 24.29279719370173 29.82467549583597 14.58156798199655 2 31.85116559640104 25.552204778882587 31.132068949275848 11.464560675440525 3 27.56959895394696 25.061932233842633 34.83607673072128 12.532392081489121 4 24.430100297162376 28.081736289026598 33.91678330048574 13.571380113325294 5 22.164955581203714 32.31119040818452 32.67185141622048 12.852002594391292 6 20.381938127829514 40.31564805984557 30.16766318544064 9.134750626884273 7 86.32361704122722 4.033167935847151 8.243025844959625 1.4001891779659956 8 88.25800279402634 2.9242860346647666 7.533932555332827 1.283778615976075 9 84.13435092469481 4.628789014714658 8.995654264951995 2.2412057956385363 10 53.14554820343589 25.230909035127556 14.04503801059794 7.5785047508386185 11 47.38564520359533 19.529751454375834 23.766313790849022 9.318289551179813 12 42.70387944463433 22.59646110163109 24.4540392174825 10.245620236252082 13 18.395958384304365 46.166380681550564 24.11556708234254 11.322093851802526 14 11.476659768743117 47.10846793934724 29.6765264194505 11.738345872459137 15 10.504951337878847 25.01124567511428 54.022451596064855 10.461351390942013 16 12.293046089335384 19.825206991720332 51.63119543795045 16.250551480993835 17 12.919001323554385 20.332180606622615 32.60401007163095 34.14480799819205 18 17.07182064995465 23.57370054657654 42.89091846377812 16.463560339690687 19 30.49416586042054 21.182876498937226 30.990898457063125 17.33205918357911 20 30.19391389680251 23.371235183471946 30.751768520146932 15.683082399578604 21 18.119472496816428 32.84199491578815 32.781477843751446 16.257054743643977 22 19.110582688012347 25.420799983406955 26.61571508018026 28.852902248400436 23 13.869277074854066 33.29988078071992 29.851552767386718 22.97928937703929 24 12.137507923825837 22.768462676241658 51.39493903569362 13.699090364238883 25 12.148980456939542 27.14595784416627 45.29619660680929 15.408865092084904 26 11.405361540352853 40.4911497293044 31.033223678098437 17.07026505224432 27 11.275620370206328 45.266748277931725 30.536577503550866 12.921053848311075 28 10.14766079154861 33.25759877073212 43.39324689107316 13.201493546646109 29 11.208513613424463 26.748977950698787 41.87487549816936 20.167632937707385 30 15.215582076576025 39.185268662527335 31.66507722030245 13.934072040594186 31 29.477258673861595 29.38104927658225 28.80705532699312 12.334636722563037 32 32.20562581911942 23.956593638556008 31.718334836357602 12.119445705966971 33 31.155165254169543 27.421493088609004 25.125430868157476 16.297910789063973 34 18.515847435618777 26.826822652786703 28.44177073687367 26.21555917472085 35 18.106854870943724 26.083830296388893 36.330401175686184 19.4789136569812 36 32.4024305350003 27.76279554736082 26.018279137317364 13.816494780321516 37 16.50141321730879 41.13698204537765 29.77068329197316 12.590921445340403 38 16.35300487463827 41.07899281962023 25.5204878700108 17.047514435730697 39 18.46470716089158 37.888569943346 28.353447355764764 15.293275539997659 40 25.98794498196587 25.824758461047185 27.10747840635928 21.079818150627663 41 14.421773528307341 24.815629263039906 29.90392455696793 30.85867265168482 42 16.507030653484993 23.150383519652166 28.04157162036675 32.301014206496085 43 16.567439697902923 23.54295588627371 31.173573160408484 28.716031255414887 44 13.519786122599248 30.81762215655103 35.146396868408964 20.516194852440755 45 12.575862395283426 47.57406697625942 24.860439119307 14.989631509150156 46 17.406727873675095 40.528786551684945 26.011559819429674 16.05292575521028 47 16.871969555224368 30.067910482265535 28.298763775141804 24.76135618736829 48 17.41273420927888 27.714334357579197 39.78795474766261 15.084976685479317 49 20.69629849845931 28.253262542114566 36.7929322282252 14.257506731200925 50 17.768166680566218 41.192745902188335 26.52944422382804 14.509643193417402 51 15.697838972303016 38.48987327496097 26.742496293572398 19.069791459163614 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5621.0 1 6837.0 2 8053.0 3 26102.0 4 44151.0 5 34946.5 6 25742.0 7 26791.0 8 27840.0 9 29450.5 10 31061.0 11 30913.0 12 30765.0 13 31914.0 14 33063.0 15 31147.0 16 29231.0 17 27972.5 18 26714.0 19 25931.0 20 25148.0 21 26600.0 22 28052.0 23 30349.0 24 32646.0 25 41245.5 26 58885.5 27 67926.0 28 86581.5 29 105237.0 30 119818.5 31 134400.0 32 155585.0 33 176770.0 34 204660.5 35 232551.0 36 229980.5 37 227410.0 38 275873.5 39 324337.0 40 405246.5 41 486156.0 42 570948.5 43 655741.0 44 624015.0 45 592289.0 46 502305.0 47 412321.0 48 353035.5 49 293750.0 50 243737.0 51 193724.0 52 154275.0 53 114826.0 54 89153.0 55 63480.0 56 52270.0 57 41060.0 58 35662.0 59 30264.0 60 27039.5 61 23815.0 62 20668.5 63 17522.0 64 14904.0 65 12286.0 66 10028.0 67 7770.0 68 7136.0 69 6502.0 70 5251.0 71 4000.0 72 3429.0 73 2858.0 74 2190.5 75 1168.0 76 813.0 77 641.5 78 470.0 79 386.5 80 303.0 81 220.5 82 138.0 83 122.5 84 107.0 85 114.0 86 121.0 87 79.5 88 38.0 89 19.5 90 1.0 91 1.0 92 1.0 93 2.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4628446.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.795669664841776 #Duplication Level Percentage of deduplicated Percentage of total 1 79.99075244426012 11.835167494074076 2 8.195140861770486 2.4250519409520574 3 2.7985485923192366 1.2421920153889014 4 1.3918779251354534 0.8237506397635816 5 0.8346824284072616 0.6174842742880894 6 0.5762162234278151 0.511530293841637 7 0.42645090854803297 0.4416738739803842 8 0.3288449683528296 0.3892385218155052 9 0.29057753748258963 0.38693603309540175 >10 3.1042642230196935 10.327606001273617 >50 0.7014708506933807 7.334960093007448 >100 1.153211790304739 42.02661285928571 >500 0.18898882706353334 17.251348670648746 >1k 0.0188253461977683 3.883759415276585 >5k 0.0 0.0 >10k+ 1.4707301717006486E-4 0.5026878733082194 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23101 0.4991092042555968 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.016312170434742028 0.0 2 0.0 0.0 0.0 0.07674282037642872 0.0 3 0.0 0.0 0.0 0.11535189132594395 0.0 4 0.0 0.0 0.0 0.16634092738685943 0.0 5 0.0 0.0 0.0 0.31181091882675094 0.0 6 0.0 0.0 0.0 0.44764484667207954 0.0 7 0.0 0.0 0.0 0.5388201569165979 0.0 8 0.0 0.0 0.0 0.7196151796953016 0.0 9 0.0 0.0 0.0 0.7971574044506514 0.0 10 0.0 0.0 0.0 0.9243275172703754 0.0 11 0.0 0.0 0.0 1.0770353591680664 0.0 12 0.0 0.0 0.0 1.1975077596238566 0.0 13 0.0 0.0 0.0 1.2520617071042852 0.0 14 0.0 0.0 0.0 1.274142552381512 0.0 15 0.0 0.0 0.0 1.3091435008640049 0.0 16 0.0 0.0 0.0 1.3847628340051932 0.0 17 0.0 0.0 0.0 1.4848612255603717 0.0 18 0.0 0.0 0.0 1.6178000132225805 0.0 19 0.0 0.0 0.0 1.6843882374343355 0.0 20 0.0 0.0 0.0 1.7535475189728906 0.0 21 0.0 0.0 0.0 1.8554607745234577 0.0 22 0.0 0.0 0.0 1.96370444853413 0.0 23 2.16055237546252E-5 0.0 0.0 2.091220249733928 0.0 24 2.16055237546252E-5 0.0 0.0 2.185982076921714 0.0 25 2.16055237546252E-5 0.0 0.0 2.2638267790096287 0.0 26 2.16055237546252E-5 0.0 0.0 2.3474617614637827 0.0 27 2.16055237546252E-5 0.0 0.0 2.42947632963634 0.0 28 2.16055237546252E-5 0.0 0.0 2.515833608083577 0.0 29 2.16055237546252E-5 0.0 0.0 2.617185120016524 0.0 30 2.16055237546252E-5 0.0 0.0 2.755309233379843 0.0 31 2.16055237546252E-5 0.0 0.0 2.8815070976306085 0.0 32 2.16055237546252E-5 0.0 0.0 2.9922138013493083 0.0 33 2.16055237546252E-5 0.0 0.0 3.1032013768768176 0.0 34 2.16055237546252E-5 0.0 0.0 3.2228311619061776 0.0 35 2.16055237546252E-5 0.0 0.0 3.3874004363451578 0.0 36 2.16055237546252E-5 0.0 0.0 3.5191941312483714 0.0 37 2.16055237546252E-5 0.0 0.0 3.655049664617455 0.0 38 2.16055237546252E-5 0.0 0.0 3.77984316982417 0.0 39 2.16055237546252E-5 0.0 0.0 3.922979764698562 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTACGC 35 1.2129931E-7 45.000004 20 GTCGGTT 110 0.0 45.000004 45 ATCGTCC 25 3.892643E-5 45.0 21 GACCGTA 30 2.166933E-6 44.999996 9 CTTGACG 220 0.0 43.977276 1 CGGGTAT 310 0.0 42.82258 6 TCTAGCG 190 0.0 42.63158 1 CTACGCG 85 0.0 42.352943 1 ACTACGG 340 0.0 42.352943 2 CGTTTTT 20525 0.0 41.788063 1 TGATCCG 70 0.0 41.785717 1 TGATCGA 65 0.0 41.53846 29 AACCGTA 65 0.0 41.53846 34 GGTACGC 65 0.0 41.53846 8 CTAAGCG 65 0.0 41.53846 1 TACGACC 65 0.0 41.53846 39 ATCGAAT 65 0.0 41.53846 31 GTACGCG 130 0.0 41.53846 1 CCCGCTA 60 3.6379788E-12 41.249996 33 TAAGTCG 55 6.184564E-11 40.909092 1 >>END_MODULE