SRR1545098_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545098_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	5848900
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28269	0.4833216502248286	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	9012	0.15408025440681153	No Hit
AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	8407	0.14373642907213321	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6096	0.10422472601685788	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5958	0.10186530800663372	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAATGCG	210	0.0	45.000004	1
GGTCGAC	25	3.892769E-5	45.0	8
TACTCGA	70	0.0	45.0	20
CGCACCA	90	0.0	45.0	32
ACGAGAC	40	6.8230293E-9	45.0	11
CGGACTA	75	0.0	45.0	6
GCGTCGA	125	0.0	44.999996	41
TCGATAG	400	0.0	44.4375	1
CGTCGAT	130	0.0	43.269234	42
CGTTTTT	21500	0.0	42.906975	1
GTACGCG	105	0.0	42.857147	1
TACGTCG	95	0.0	42.63158	1
TTACGCG	185	0.0	42.567566	1
TACGCGG	445	0.0	42.47191	2
CGTATCA	80	0.0	42.1875	29
GTCGATC	75	0.0	42.0	13
GACCGTA	70	0.0	41.785713	8
TATTCGC	70	0.0	41.785713	24
CGTTCGA	65	0.0	41.538464	14
CGTAAAT	120	0.0	41.249996	20