##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545097_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1779873 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.910012680680026 31.0 31.0 33.0 30.0 33.0 2 31.228659011064273 31.0 31.0 33.0 30.0 34.0 3 31.390814962640594 31.0 31.0 34.0 30.0 34.0 4 35.22314288716105 37.0 35.0 37.0 33.0 37.0 5 35.08711913715192 37.0 35.0 37.0 32.0 37.0 6 35.156313399888646 37.0 35.0 37.0 32.0 37.0 7 35.559396653581466 36.0 35.0 37.0 35.0 37.0 8 35.64303632899651 37.0 35.0 37.0 35.0 37.0 9 37.5270746845421 39.0 37.0 39.0 35.0 39.0 10 37.09493036862742 39.0 37.0 39.0 33.0 39.0 11 36.581710605194864 39.0 35.0 39.0 32.0 39.0 12 34.772836039425286 35.0 34.0 39.0 30.0 39.0 13 34.187315050006376 35.0 33.0 39.0 26.0 39.0 14 34.72897223565951 35.0 33.0 40.0 25.0 41.0 15 35.3165995551368 35.0 33.0 40.0 30.0 41.0 16 35.624055761281845 35.0 34.0 40.0 31.0 41.0 17 35.50368031876432 35.0 34.0 39.0 31.0 41.0 18 35.64717482651852 36.0 35.0 39.0 31.0 41.0 19 35.482456332558556 36.0 34.0 39.0 31.0 41.0 20 35.12573762285287 35.0 34.0 39.0 30.0 41.0 21 34.95765034921031 35.0 34.0 39.0 30.0 41.0 22 34.78110573057741 35.0 34.0 39.0 29.0 41.0 23 34.78811915232154 35.0 34.0 39.0 29.0 41.0 24 34.950609397412066 35.0 34.0 39.0 30.0 41.0 25 34.852062478615046 35.0 34.0 38.0 30.0 41.0 26 34.599785490313074 35.0 34.0 38.0 29.0 41.0 27 34.58713514953033 35.0 34.0 38.0 29.0 41.0 28 34.74544138823388 35.0 34.0 38.0 29.0 41.0 29 34.79459826628079 35.0 34.0 38.0 29.0 41.0 30 34.74853318186185 35.0 34.0 38.0 29.0 41.0 31 34.40351362147749 35.0 34.0 38.0 29.0 41.0 32 34.23418918091347 35.0 34.0 38.0 29.0 41.0 33 34.00291537654653 35.0 33.0 38.0 27.0 41.0 34 33.84323038778609 35.0 33.0 38.0 26.0 41.0 35 33.61224705358191 35.0 33.0 38.0 24.0 41.0 36 33.27923621516816 35.0 33.0 38.0 23.0 41.0 37 33.322277488337654 35.0 33.0 38.0 23.0 41.0 38 33.42359539135657 35.0 33.0 38.0 23.0 41.0 39 33.4442772040477 35.0 33.0 38.0 23.0 41.0 40 33.08670337715107 35.0 32.0 38.0 23.0 41.0 41 33.26949675622924 35.0 33.0 38.0 23.0 41.0 42 33.222897364025414 35.0 33.0 38.0 23.0 41.0 43 33.195965667213336 35.0 33.0 38.0 23.0 41.0 44 33.19236990504379 35.0 33.0 38.0 23.0 41.0 45 33.276266902189086 35.0 33.0 38.0 23.0 40.0 46 33.306339834358965 35.0 33.0 38.0 23.0 40.0 47 33.28392362825887 35.0 33.0 38.0 23.0 40.0 48 33.34041024275327 35.0 33.0 38.0 23.0 40.0 49 33.3936219044842 35.0 33.0 38.0 24.0 40.0 50 33.127494489775394 35.0 32.0 38.0 24.0 40.0 51 32.811594422748136 35.0 32.0 37.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 3.0 13 5.0 14 10.0 15 33.0 16 118.0 17 404.0 18 1012.0 19 2160.0 20 3873.0 21 6196.0 22 9431.0 23 13889.0 24 19847.0 25 27359.0 26 34982.0 27 39860.0 28 44241.0 29 50894.0 30 60895.0 31 75482.0 32 97540.0 33 132075.0 34 255067.0 35 380755.0 36 81594.0 37 97003.0 38 140687.0 39 204352.0 40 101.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.031202788064093 24.922901802544338 30.46661194366115 13.579283465730422 2 29.473057909187904 26.539365449107887 32.36607330972491 11.621503331979303 3 27.734675451563117 26.177654248364913 33.53728046888739 12.550389831184585 4 25.437432895493107 28.152458068637483 33.07685435983354 13.333254676035875 5 23.150528155660545 33.39654009021992 31.489999567384864 11.962932186734673 6 19.837876073180503 42.2023930920914 28.223418187702155 9.73631264702594 7 87.15048770333613 5.122668864576293 6.4656298511185915 1.2612135809689793 8 90.36397540723411 3.0171815629542107 5.800245298400504 0.8185977314111738 9 87.23959518460025 4.394470841458913 6.9956114846396344 1.370322489301203 10 69.6065393429756 15.302046831431232 10.12943058296856 4.961983242624615 11 67.33868090588486 12.414818360635843 14.914097803607337 5.332402929871963 12 58.56479647705201 21.22381765440568 14.313212234805517 5.898173633736789 13 15.698479610623902 62.276184873864594 14.795606203363947 7.229729312147552 14 7.873370740496653 58.73795489902931 25.19432566256132 8.194348697912716 15 6.287527256158164 21.033073708067935 65.84795656768769 6.831442468086206 16 6.5344549863950965 13.531864352119506 61.754630807928436 18.17904985355697 17 7.632510858920834 14.969438830748036 30.411945121927236 46.98610518840389 18 15.74842699451028 20.443705814965448 47.83139021716718 15.976476973357087 19 36.751891848463345 16.288409341565384 27.689728424443764 19.269970385527508 20 35.87081774935628 19.01708717419726 29.49626181193827 15.615833264508197 21 15.537793988672224 36.02448039832055 30.676008906253422 17.7617167067538 22 19.099845887880765 24.20346844971523 18.662848416712876 38.033837245691124 23 10.538673264890248 35.53461398650353 25.44198378198894 28.48472896661728 24 8.618592450135488 18.38383974586951 61.99672673275003 11.00084107124497 25 7.761115540266076 23.90614386532073 53.67927936431419 14.653461230099001 26 7.225122241867819 46.652204960691016 28.406184036726216 17.71648876071495 27 7.010387819805121 57.05317177124435 26.04112765348988 9.895312755460642 28 6.290392629137023 35.91222519808998 47.17859083204251 10.61879134073049 29 7.150397809281898 25.78442394485449 44.05117668507809 23.014001560785516 30 13.42556463298224 47.33697291885433 28.031044911631337 11.2064175365321 31 37.032136562552495 30.81821006330227 23.901480611257096 8.248172762888139 32 41.638869739582546 20.02227125193764 29.041004611003146 9.297854397476673 33 39.92947811444974 27.133452780057905 17.707892641778376 15.229176463713983 34 18.669141000509587 26.39856888665652 23.832711659764488 31.099578453069405 35 19.823886310989604 22.794884803578682 36.69660700510654 20.684621880325167 36 42.81687513659683 25.82476390169411 20.972844691728003 10.38551626998106 37 15.436101339814694 48.20298976387642 27.25076452083941 9.110144375469485 38 14.977079825358325 47.34135525399846 20.73715371827091 16.944411202372304 39 20.06485856013322 41.693929847803744 25.775996377269617 12.465215214793416 40 30.12754280782955 23.109513993414136 22.226473461870594 24.53646973688572 41 12.123055970847359 21.591147233538575 27.49213005647032 38.79366673914375 42 15.036466084939768 17.874646112391165 26.227994918738585 40.86089288393048 43 15.354915772080368 19.589993218617284 30.358121056951816 34.69696995235053 44 9.459888430241934 31.598827556797595 37.01174184899709 21.929542163963383 45 9.985881015106134 58.62176683392579 19.21238200703084 12.179970143937236 46 18.45002424330275 46.188913478658314 21.12476564339141 14.236296634647527 47 16.719338964072154 30.022422948154166 25.00723366217702 28.25100442559666 48 17.421523895244214 26.71291715757248 42.782546844634425 13.08301210254889 49 23.109626360981935 27.123452066523846 39.32482823212668 10.442093340367544 50 19.484648623806304 47.264327286272675 22.035448596613357 11.215575493307668 51 15.037983047105048 42.152670443340625 22.794603884659185 20.014742624895145 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2256.0 1 2660.0 2 3064.0 3 6996.0 4 10928.0 5 9106.0 6 7284.0 7 7915.0 8 8546.0 9 9257.0 10 9968.0 11 10228.0 12 10488.0 13 9939.5 14 9391.0 15 8824.0 16 8257.0 17 7847.0 18 7437.0 19 6712.0 20 5987.0 21 6359.5 22 6732.0 23 7785.0 24 8838.0 25 9822.0 26 12917.5 27 15029.0 28 20633.5 29 26238.0 30 34040.5 31 41843.0 32 46411.0 33 50979.0 34 59220.0 35 67461.0 36 68880.0 37 70299.0 38 84901.0 39 99503.0 40 157882.5 41 216262.0 42 274007.5 43 331753.0 44 304660.0 45 277567.0 46 232439.0 47 187311.0 48 150842.0 49 114373.0 50 94845.0 51 75317.0 52 58153.0 53 40989.0 54 29505.0 55 18021.0 56 13832.0 57 9643.0 58 8416.5 59 7190.0 60 6820.5 61 6451.0 62 5481.0 63 4511.0 64 3791.0 65 3071.0 66 2534.0 67 1997.0 68 1703.0 69 1409.0 70 1247.5 71 1086.0 72 859.0 73 632.0 74 514.5 75 332.5 76 268.0 77 191.0 78 114.0 79 100.5 80 87.0 81 71.5 82 56.0 83 34.5 84 13.0 85 13.0 86 13.0 87 9.0 88 5.0 89 4.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1779873.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.670116499513476 #Duplication Level Percentage of deduplicated Percentage of total 1 81.30966130035412 11.115125425118233 2 7.034101856793992 1.9231398370363588 3 2.3662962998676766 0.9704263827467646 4 1.242178974888845 0.6792292519990696 5 0.8354427002072948 0.5710299520250917 6 0.6315789183939579 0.5180254435849271 7 0.49931370388536866 0.47779735513415944 8 0.38676000366370344 0.42296434459480675 9 0.32810063961097824 0.40366565703422636 >10 3.0740844845839126 8.681466415835903 >50 0.5255490309968368 5.185038314510855 >100 1.6462535083340453 56.47390743998515 >500 0.1062630485739764 9.598156730529107 >1k 0.014003657564012395 2.660055110128629 >5k 4.118722812944822E-4 0.31997233973671285 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5683 0.3192924438990872 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2900 0.16293297330764608 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2264 0.12720008674776234 No Hit AGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA 1987 0.11163717860768717 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1874 0.10528841102707891 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 1787 0.1004004218278495 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010562551373047404 0.0 2 0.0 0.0 0.0 0.04685727577192305 0.0 3 0.0 0.0 0.0 0.06506082175526007 0.0 4 0.0 0.0 0.0 0.09444494073453555 0.0 5 0.0 0.0 0.0 0.17652944901124967 0.0 6 0.0 0.0 0.0 0.23260086534263963 0.0 7 0.0 0.0 0.0 0.2792334059789659 0.0 8 0.0 0.0 0.0 0.36401473588284106 0.0 9 5.618378389918831E-5 0.0 0.0 0.3954214710824873 0.0 10 5.618378389918831E-5 0.0 0.0 0.4671681631217508 0.0 11 5.618378389918831E-5 0.0 0.0 0.5429039038178567 0.0 12 5.618378389918831E-5 0.0 0.0 0.609537871522294 0.0 13 5.618378389918831E-5 0.0 0.0 0.6349329418447272 0.0 14 5.618378389918831E-5 0.0 0.0 0.645046022946581 0.0 15 5.618378389918831E-5 0.0 0.0 0.664710347311297 0.0 16 5.618378389918831E-5 0.0 0.0 0.7117923582188167 0.0 17 5.618378389918831E-5 0.0 0.0 0.7640432772450618 0.0 18 5.618378389918831E-5 0.0 0.0 0.8430376774073206 0.0 19 5.618378389918831E-5 0.0 0.0 0.8770288666663295 0.0 20 5.618378389918831E-5 0.0 0.0 0.9106267694380442 0.0 21 5.618378389918831E-5 0.0 0.0 0.9698444776677887 0.0 22 5.618378389918831E-5 0.0 0.0 1.020353699393159 0.0 23 5.618378389918831E-5 0.0 0.0 1.0954714184663736 0.0 24 5.618378389918831E-5 0.0 0.0 1.1469357645180303 0.0 25 5.618378389918831E-5 0.0 0.0 1.1906467483915988 0.0 26 5.618378389918831E-5 0.0 0.0 1.243571872824634 0.0 27 5.618378389918831E-5 0.0 0.0 1.2859906296685213 0.0 28 5.618378389918831E-5 0.0 0.0 1.3306005540844767 0.0 29 5.618378389918831E-5 0.0 0.0 1.3813345109454438 0.0 30 5.618378389918831E-5 0.0 0.0 1.4594299705653155 0.0 31 5.618378389918831E-5 0.0 0.0 1.542750522087812 0.0 32 5.618378389918831E-5 0.0 0.0 1.6038222951862295 0.0 33 5.618378389918831E-5 0.0 0.0 1.6632085547676716 0.0 34 5.618378389918831E-5 0.0 0.0 1.736416025188314 0.0 35 5.618378389918831E-5 0.0 0.0 1.8527164578596338 0.0 36 5.618378389918831E-5 0.0 0.0 1.9304748147761104 0.0 37 5.618378389918831E-5 0.0 0.0 2.003120447357761 0.0 38 5.618378389918831E-5 0.0 0.0 2.071159009659678 0.0 39 5.618378389918831E-5 0.0 0.0 2.1425685989955463 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGTACG 75 0.0 45.000004 1 AAGCGAA 45 3.8562575E-10 45.000004 24 ATCGTAC 45 3.8562575E-10 45.000004 29 TATCTCG 45 3.8562575E-10 45.000004 1 GTTCGAC 45 3.8562575E-10 45.000004 23 TATTACG 45 3.8562575E-10 45.000004 1 CGTACTC 45 3.8562575E-10 45.000004 31 TCGTACT 45 3.8562575E-10 45.000004 30 TGCGTTG 90 0.0 45.000004 1 CGGGTTC 20 7.0343306E-4 45.0 6 GTGCAGT 20 7.0343306E-4 45.0 23 TATCACG 20 7.0343306E-4 45.0 1 CATGGAC 25 3.8916718E-5 45.0 14 CAGCGCG 35 1.2124292E-7 45.0 1 AACCGAT 25 3.8916718E-5 45.0 14 CCGGGTC 35 1.2124292E-7 45.0 5 GCAAGTA 25 3.8916718E-5 45.0 9 CATATCG 25 3.8916718E-5 45.0 1 GGTAATC 80 0.0 45.0 8 ATAGGCG 20 7.0343306E-4 45.0 4 >>END_MODULE