##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545096_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1889142 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.868690124935025 31.0 31.0 33.0 30.0 33.0 2 31.185630302010118 31.0 31.0 33.0 30.0 34.0 3 31.354482616976384 31.0 31.0 34.0 28.0 34.0 4 35.18270569390761 37.0 35.0 37.0 32.0 37.0 5 35.055497680957814 37.0 35.0 37.0 32.0 37.0 6 35.123698483226775 37.0 35.0 37.0 32.0 37.0 7 35.5303301710512 36.0 35.0 37.0 35.0 37.0 8 35.59740877075413 37.0 35.0 37.0 35.0 37.0 9 37.420164815561776 39.0 37.0 39.0 35.0 39.0 10 36.979945393199664 39.0 37.0 39.0 33.0 39.0 11 36.52754636761027 39.0 35.0 39.0 32.0 39.0 12 34.89334893830109 35.0 34.0 39.0 30.0 39.0 13 34.35215669335603 35.0 33.0 39.0 27.0 39.0 14 34.93814017156995 35.0 33.0 40.0 27.0 41.0 15 35.46901715170167 35.0 33.0 40.0 30.0 41.0 16 35.701934529008405 35.0 34.0 40.0 31.0 41.0 17 35.57140066760466 35.0 34.0 40.0 31.0 41.0 18 35.70026498802102 36.0 35.0 39.0 31.0 41.0 19 35.55512767171552 36.0 34.0 39.0 31.0 41.0 20 35.23397023622364 35.0 34.0 39.0 30.0 41.0 21 35.057203217121845 35.0 34.0 39.0 29.0 41.0 22 34.88842553921304 35.0 34.0 39.0 29.0 41.0 23 34.8703178479966 35.0 34.0 39.0 29.0 41.0 24 34.98568397717059 35.0 34.0 39.0 30.0 41.0 25 34.89950146680345 35.0 34.0 39.0 30.0 41.0 26 34.651619094806 35.0 34.0 39.0 29.0 41.0 27 34.613417096226755 35.0 34.0 39.0 29.0 41.0 28 34.739731581850386 35.0 34.0 39.0 29.0 41.0 29 34.75292540211376 35.0 34.0 39.0 29.0 41.0 30 34.728216301368555 35.0 34.0 38.0 29.0 41.0 31 34.41866942770845 35.0 34.0 39.0 29.0 41.0 32 34.250153773512 35.0 34.0 39.0 27.0 41.0 33 34.02739285876869 35.0 33.0 39.0 27.0 41.0 34 33.875858458495976 35.0 33.0 39.0 25.0 41.0 35 33.666762477357445 35.0 33.0 38.0 24.0 41.0 36 33.387896727720836 35.0 33.0 38.0 23.0 41.0 37 33.42753323995761 35.0 33.0 38.0 23.0 41.0 38 33.487028502886496 35.0 33.0 38.0 23.0 41.0 39 33.504177028513475 35.0 33.0 38.0 23.0 41.0 40 33.15035238219255 35.0 32.0 38.0 23.0 41.0 41 33.28481077653242 35.0 32.0 38.0 23.0 41.0 42 33.2639584530967 35.0 32.0 38.0 23.0 41.0 43 33.23585098420341 35.0 33.0 38.0 23.0 41.0 44 33.21029229142118 35.0 33.0 38.0 23.0 41.0 45 33.28865326163941 35.0 33.0 38.0 23.0 41.0 46 33.32696536311193 35.0 33.0 38.0 23.0 41.0 47 33.257319460368784 35.0 33.0 38.0 23.0 41.0 48 33.311664766333074 35.0 33.0 38.0 23.0 41.0 49 33.399248441885256 35.0 33.0 38.0 24.0 40.0 50 33.14867490109267 35.0 32.0 38.0 24.0 40.0 51 32.84525514757493 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 1.0 10 3.0 11 4.0 12 6.0 13 9.0 14 12.0 15 48.0 16 172.0 17 513.0 18 1209.0 19 2593.0 20 4484.0 21 7344.0 22 10964.0 23 15700.0 24 21873.0 25 29509.0 26 37225.0 27 42925.0 28 47654.0 29 54705.0 30 64747.0 31 79606.0 32 102391.0 33 136376.0 34 256168.0 35 376755.0 36 94495.0 37 113481.0 38 162675.0 39 225382.0 40 111.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.735381458884508 25.30259768720403 30.53841373491246 13.423607118998996 2 29.702743361801282 27.486657964303372 30.74337450546333 12.067224168432018 3 28.485100643572586 25.45076018637032 33.69275575896359 12.371383411093502 4 25.856605803057686 27.80950293837097 32.66424652037803 13.669644738193318 5 23.031937249820288 32.797481608052756 31.594501630899106 12.576079511227848 6 20.31170764294055 41.20733115880119 28.84182343095437 9.639137767303888 7 86.1759994748939 5.468620146076896 7.099889791238562 1.255490587790648 8 88.97256002989718 3.46432401587599 6.406876772630114 1.1562391815967248 9 84.54637078631463 5.577135016848919 8.026024512715296 1.8504696841211514 10 65.59882740418666 16.57186172347023 11.867768542544711 5.961542329798395 11 63.13516929907863 14.23863319962184 16.224720005166365 6.401477496133165 12 55.13450021226567 20.739044497449107 17.12655798240683 6.999897307878392 13 16.500347776927306 57.86304047022405 18.06799065395825 7.568621098890397 14 8.748627683890358 56.57520715753501 26.297387914725306 8.378777243849324 15 8.204888780197571 20.82760321881574 62.693063835328424 8.274444165658272 16 8.769271976378695 15.006177407521509 59.95864789412336 16.26590272197643 17 8.970897899681443 15.339132791500058 31.291877476653422 44.39809183216508 18 16.042679692685883 21.50399493526691 46.575376546601575 15.877948825445626 19 37.43757748226443 17.70142212708203 27.35299940396222 17.508000986691314 20 36.09082853485868 20.247975006643227 27.48962227296836 16.171574185529728 21 15.880701397777402 36.623768885557574 30.213345529346125 17.2821841873189 22 18.255324374769074 24.91977839675366 20.529954868400576 36.294942360076696 23 12.087921395003658 36.12692957967162 25.457588683116462 26.327560342208262 24 9.680691022697076 19.78289615073933 58.82300007093168 11.713412755631921 25 8.587443400231427 24.679457658556107 51.71755220094625 15.015546740266217 26 8.237125636929358 45.722608464583395 29.17514935351604 16.865116544971208 27 9.610818032736553 52.38097506698808 26.747804029554157 11.260402870721206 28 8.024701160632711 34.62836568135164 46.02512675066247 11.32180640735318 29 8.488086125870899 26.204488598527796 43.87118596696278 21.436239308638523 30 14.168283802911585 45.22111095936674 28.458315997421053 12.152289240300624 31 37.20408524081302 28.385108160212415 24.741125865604594 9.669680733369963 32 40.198936871870934 20.23087729773622 29.050542521419775 10.519643308973068 33 38.770034227178265 25.53476657657286 20.14898827086582 15.546210925383058 34 18.73268393799937 25.446154921122922 24.501916743156418 31.31924439772129 35 19.349842415234004 22.90341329555957 37.756981740917304 19.989762548289118 36 41.02031504249019 25.186936715186047 21.999775559486793 11.79297268283697 37 15.049742158080228 47.92916572708668 26.35519193369265 10.665900181140433 38 16.008801879371692 47.133142982369776 20.34749108325367 16.510564055004863 39 20.541706234893937 41.98810888752672 24.336868271416336 13.133316606163008 40 30.147813134216484 22.29424786490375 23.567047897934618 23.99089110294515 41 12.310562149377866 22.830364260600845 26.165476179133172 38.69359741088812 42 15.350513619410295 19.998814276534002 25.23394218115949 39.41672992289622 43 16.735586843127727 20.270471992047185 29.057794490832343 33.936146673992745 44 10.873084183190041 31.710639009666824 37.24055682420909 20.17571998293405 45 10.326910311665296 55.83661789320231 20.529160857151023 13.30731093798137 46 17.2791140104873 44.89318431330202 22.562782469502025 15.264919206708655 47 17.443421405061134 28.379126608799126 25.221979078332918 28.955472907806822 48 17.688241540339476 25.92097364835465 42.33625635341335 14.054528457892527 49 21.431475241141214 27.265393496095054 39.684682252578156 11.618449010185577 50 17.49164435495055 47.996921353715074 22.714226881833127 11.797207409501244 51 16.24409387965542 41.91119566448684 23.824307542789267 18.020402913068473 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1866.0 1 2923.5 2 3981.0 3 8750.5 4 13520.0 5 10875.0 6 8230.0 7 8883.5 8 9537.0 9 9966.0 10 10395.0 11 10339.0 12 10283.0 13 9970.0 14 9657.0 15 9119.5 16 8582.0 17 8333.5 18 8085.0 19 7695.5 20 7306.0 21 7675.0 22 8044.0 23 8495.0 24 8946.0 25 10761.0 26 18031.5 27 23487.0 28 26975.5 29 30464.0 30 38928.5 31 47393.0 32 51243.5 33 55094.0 34 62871.0 35 70648.0 36 70703.5 37 70759.0 38 92961.0 39 115163.0 40 171905.0 41 228647.0 42 272749.0 43 316851.0 44 299025.0 45 281199.0 46 234290.5 47 187382.0 48 157983.0 49 128584.0 50 106250.0 51 83916.0 52 64753.5 53 45591.0 54 33637.5 55 21684.0 56 18495.0 57 15306.0 58 13436.0 59 11566.0 60 10608.0 61 9650.0 62 8458.5 63 7267.0 64 6168.0 65 5069.0 66 4406.0 67 3743.0 68 3306.5 69 2870.0 70 2577.5 71 2285.0 72 1929.0 73 1573.0 74 1237.5 75 695.0 76 488.0 77 402.0 78 316.0 79 226.5 80 137.0 81 92.0 82 47.0 83 39.0 84 31.0 85 20.5 86 10.0 87 9.0 88 8.0 89 5.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1889142.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.530618194779787 #Duplication Level Percentage of deduplicated Percentage of total 1 80.43672484932422 12.492320624734102 2 6.955602855423253 2.1604962452419727 3 2.5458148970698424 1.18614237482923 4 1.4180739896605237 0.8809426282146279 5 0.9594809281271294 0.7450665979957698 6 0.7375809109001326 0.687305250896871 7 0.5773409916395237 0.6276523756544296 8 0.47201965400714746 0.5864605621453652 9 0.392032665317124 0.5479658680429927 >10 3.295062484210715 10.3167449979163 >50 0.5998755211502197 6.782823630233424 >100 1.5381861852954815 54.13891779213781 >500 0.06296468478183936 6.411654056534305 >1k 0.008897183719172953 2.0676326108391465 >5k 3.4219937381434434E-4 0.36787438458369287 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6922 0.36640972462631183 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3374 0.1785995970657579 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3201 0.1694420006542653 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2878 0.1523442917472588 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2056 0.10883247527184298 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012598311826215286 0.0 2 0.0 0.0 0.0 0.0432471460588987 0.0 3 0.0 0.0 0.0 0.059550843716353774 0.0 4 0.0 0.0 0.0 0.09538721811277288 0.0 5 0.0 0.0 0.0 0.1703418800704235 0.0 6 0.0 0.0 0.0 0.24969007094225845 0.0 7 0.0 0.0 0.0 0.3104054644912876 0.0 8 0.0 0.0 0.0 0.47116627548379103 0.0 9 0.0 0.0 0.0 0.5296584375340763 0.0 10 0.0 0.0 0.0 0.610965189488138 0.0 11 0.0 0.0 0.0 0.6852317083628441 0.0 12 0.0 0.0 0.0 0.7598158317373708 0.0 13 0.0 0.0 0.0 0.7886119730544342 0.0 14 0.0 0.0 0.0 0.7983518443822646 0.0 15 0.0 0.0 0.0 0.8156083555391813 0.0 16 0.0 0.0 0.0 0.8568969405158532 0.0 17 0.0 0.0 0.0 0.9042729450724191 0.0 18 0.0 0.0 0.0 0.9810273658623863 0.0 19 0.0 0.0 0.0 1.015593322259523 0.0 20 0.0 0.0 0.0 1.0559290937367334 0.0 21 0.0 0.0 0.0 1.1135213763708605 0.0 22 0.0 0.0 0.0 1.169313900172671 0.0 23 0.0 0.0 0.0 1.240457308132475 0.0 24 0.0 0.0 0.0 1.2960380956010717 0.0 25 0.0 0.0 0.0 1.3397616484097012 0.0 26 0.0 0.0 0.0 1.393701479295892 0.0 27 0.0 0.0 0.0 1.4384307796872866 0.0 28 0.0 0.0 0.0 1.4905179176578573 0.0 29 0.0 0.0 0.0 1.5505981022072455 0.0 30 0.0 0.0 0.0 1.6401096370733381 0.0 31 0.0 0.0 0.0 1.7256511156916738 0.0 32 0.0 0.0 0.0 1.7989118869836147 0.0 33 0.0 0.0 0.0 1.8729666695251073 0.0 34 0.0 0.0 0.0 1.9474978588163303 0.0 35 0.0 0.0 0.0 2.0662819417492173 0.0 36 0.0 0.0 0.0 2.1549994653657585 0.0 37 0.0 0.0 0.0 2.2419701642332868 0.0 38 0.0 0.0 0.0 2.322747575354314 0.0 39 0.0 0.0 0.0 2.4051130089744444 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTGC 20 7.03444E-4 45.000004 13 AATCCCG 20 7.03444E-4 45.000004 42 ACACGCG 20 7.03444E-4 45.000004 36 CATATCG 20 7.03444E-4 45.000004 27 AGTTTCG 20 7.03444E-4 45.000004 1 CAAGTCG 20 7.03444E-4 45.000004 1 CGAGTGT 50 2.1827873E-11 45.000004 15 GATCGAC 20 7.03444E-4 45.000004 32 CAACGAA 20 7.03444E-4 45.000004 17 ACGTTGA 25 3.891762E-5 45.000004 16 ACGTTCA 40 6.8193913E-9 45.000004 37 GCGGTAT 20 7.03444E-4 45.000004 39 ACGCACT 25 3.891762E-5 45.000004 30 GACAACG 20 7.03444E-4 45.000004 15 ATTCGTC 30 2.1662472E-6 45.000004 14 ATTCGAA 60 0.0 45.000004 42 CCGTCGC 60 0.0 45.000004 20 ATCGTAC 20 7.03444E-4 45.000004 37 CGTTAGC 20 7.03444E-4 45.000004 14 ACGATTC 20 7.03444E-4 45.000004 42 >>END_MODULE