##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545094_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2817269 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.096199901393867 31.0 31.0 33.0 30.0 33.0 2 31.439509326230475 31.0 31.0 33.0 30.0 34.0 3 31.505569045767373 31.0 31.0 34.0 30.0 34.0 4 35.41301700334615 37.0 35.0 37.0 33.0 37.0 5 35.35844216508967 37.0 35.0 37.0 33.0 37.0 6 35.43640135180559 37.0 35.0 37.0 33.0 37.0 7 35.69074802583637 37.0 35.0 37.0 35.0 37.0 8 35.73264782312232 37.0 35.0 37.0 35.0 37.0 9 37.55025274476807 39.0 37.0 39.0 35.0 39.0 10 37.164472757127555 39.0 37.0 39.0 33.0 39.0 11 36.82735975868829 39.0 35.0 39.0 33.0 39.0 12 35.94243290221843 37.0 35.0 39.0 32.0 39.0 13 35.622995532198026 37.0 35.0 39.0 31.0 39.0 14 36.40153283197309 38.0 35.0 40.0 31.0 41.0 15 36.6556786022208 38.0 35.0 40.0 32.0 41.0 16 36.73558967922481 38.0 35.0 40.0 32.0 41.0 17 36.56843063264459 38.0 35.0 40.0 32.0 41.0 18 36.57883113043163 38.0 35.0 40.0 32.0 41.0 19 36.487916134384044 37.0 35.0 40.0 32.0 41.0 20 36.24387908999815 36.0 35.0 40.0 31.0 41.0 21 36.136989048614105 36.0 35.0 40.0 31.0 41.0 22 35.98402459970986 36.0 34.0 40.0 31.0 41.0 23 35.86757139627064 36.0 34.0 40.0 31.0 41.0 24 35.88930308039453 36.0 34.0 40.0 31.0 41.0 25 35.73664744119216 35.0 34.0 40.0 31.0 41.0 26 35.518335309833745 35.0 34.0 40.0 30.0 41.0 27 35.516626207863006 35.0 34.0 40.0 30.0 41.0 28 35.53169221682417 36.0 34.0 40.0 30.0 41.0 29 35.501724187502155 36.0 34.0 40.0 30.0 41.0 30 35.46543407817997 36.0 34.0 40.0 30.0 41.0 31 35.28882403490756 36.0 34.0 40.0 29.0 41.0 32 35.09735953506747 36.0 34.0 40.0 29.0 41.0 33 34.81926610486965 35.0 34.0 40.0 27.0 41.0 34 34.52084199272416 35.0 34.0 40.0 25.0 41.0 35 34.25325377164907 35.0 33.0 40.0 24.0 41.0 36 34.074433076855634 35.0 33.0 40.0 23.0 41.0 37 34.05982389328105 35.0 33.0 40.0 23.0 41.0 38 34.0110415441337 35.0 33.0 40.0 23.0 41.0 39 34.010161613960186 35.0 33.0 40.0 23.0 41.0 40 33.75888422440314 35.0 33.0 40.0 23.0 41.0 41 33.741539412814326 35.0 33.0 40.0 23.0 41.0 42 33.7335355622768 35.0 33.0 40.0 23.0 41.0 43 33.675737389649335 35.0 33.0 40.0 23.0 41.0 44 33.61537893612573 35.0 33.0 40.0 22.0 41.0 45 33.63448999722781 35.0 33.0 40.0 23.0 41.0 46 33.65374694429251 35.0 33.0 40.0 23.0 41.0 47 33.59806003615558 35.0 33.0 40.0 23.0 41.0 48 33.588254440736755 35.0 33.0 40.0 23.0 41.0 49 33.59885158286269 36.0 33.0 40.0 22.0 41.0 50 33.425722570333186 35.0 33.0 39.0 22.0 41.0 51 33.172699163622646 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 3.0 11 9.0 12 13.0 13 7.0 14 34.0 15 89.0 16 184.0 17 527.0 18 1238.0 19 2708.0 20 4993.0 21 8262.0 22 12914.0 23 19624.0 24 29497.0 25 43527.0 26 56182.0 27 62367.0 28 64048.0 29 68230.0 30 78829.0 31 97614.0 32 125426.0 33 168755.0 34 303697.0 35 441966.0 36 189505.0 37 234738.0 38 346017.0 39 456127.0 40 135.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.097704904998423 23.74306464877866 28.117016869883564 17.042213576339353 2 35.20004656992286 25.58477731448435 27.481791763583814 11.733384352008985 3 27.955938889754584 25.25349904464217 34.2930689259705 12.497493139632745 4 26.19678845009121 27.08708327106854 33.30289013935126 13.413238139488987 5 22.254885848671176 31.32334895957752 33.00185392307231 13.419911268678995 6 20.695041900507192 39.425734638758314 30.860702332649105 9.018521128085391 7 81.86690727793476 5.445273419045182 11.079701654332617 1.6081176486874345 8 83.42849049913231 4.241802965921962 10.778913905629885 1.5507926293158374 9 77.9953919913221 6.663971385054107 12.510413453596373 2.8302231700274274 10 49.924448109143995 23.158633414132623 18.0681716939348 8.84874678278858 11 45.11447078713463 20.29355379269782 24.631797673562588 9.960177746604955 12 40.73679155238637 22.665425275328698 25.983816241899515 10.61396693038542 13 19.186772722093632 42.329681688188096 26.548831510232073 11.934714079486197 14 12.67173990130158 43.880580803608034 30.779843884272324 12.667835410818066 15 12.401655645946482 25.006735246084062 50.742438865440256 11.849170242529201 16 13.762654542395488 20.30047538946405 49.949436848238484 15.98743321990197 17 13.939031026146242 20.334586438142754 33.81640162866947 31.909980907041536 18 17.223665897718675 24.118818614764866 41.8392776834587 16.81823780405776 19 29.3406131966809 21.656646915860716 30.95107353965844 18.051666347799944 20 28.877753597544288 23.264729069180117 31.91534070761436 15.942176625661233 21 18.475694014309603 31.229747674077274 34.05620833509332 16.238349976519814 22 19.8865639028435 25.35693254708727 27.760643374842797 26.995860175226433 23 15.76487726234165 31.1990086853616 30.110685206134026 22.92542884616272 24 13.63586508778537 23.64293221556053 48.28250337472211 14.438699321931983 25 13.54134092271629 26.917166944299602 44.05092307479335 15.49056905819075 26 12.92095288025389 37.166667435732975 32.35637065541132 17.556009028601814 27 12.982430857685227 42.624790178005725 30.858395133727022 13.534383830582028 28 12.148857634822944 33.234384079049605 40.72550402535221 13.89125426077524 29 12.718984236152103 27.146963956938443 39.946167724842745 20.18788408206671 30 15.53660655052819 37.518923468082036 32.463531171499774 14.480938809890004 31 27.54933944894861 30.082856837596978 29.442520398300626 12.925283315153788 32 29.966183562875965 24.937980718206177 32.23664477903956 12.859190939878301 33 29.912976006196075 28.183996629359854 26.242080539699973 15.660946824744105 34 19.487418489324234 28.153328631380248 28.432925645367906 23.92632723392761 35 19.414936947802996 27.153424113920256 34.18480805347306 19.246830884803686 36 31.059831347308332 28.37946962111179 26.417143694833545 14.14355533674633 37 17.021129327728378 40.11938512083866 30.00707422684877 12.852411324584198 38 17.426237963077007 39.17091339165695 26.3002219525363 17.102626692729732 39 19.613604522677814 36.943756524492336 28.188646522572036 15.253992430257812 40 24.752233457294988 26.78519516595682 28.039246518525562 20.423324858222628 41 15.115276531988957 27.17763195491804 30.05939439932786 27.64769711376514 42 16.68800529874854 25.26776818259101 28.699779822232095 29.34444669642835 43 18.120704838622085 24.839055127501137 30.435112869946035 26.605127163930742 44 14.514552923416261 31.085494498395434 33.99274261705219 20.40720996113612 45 13.876239720097727 44.86280862778811 25.45227310562108 15.808678546493073 46 17.997713388391382 39.39492465930658 26.71984819341 15.887513758892032 47 18.281179397494522 31.4220970734424 27.683547435477408 22.61317609358567 48 18.18055002912395 29.703020904287097 36.54691830989515 15.569510756693806 49 21.388514905747375 29.189402928864798 34.92687421754898 14.495207947838848 50 18.41570684233561 39.5935922341814 27.1683676638617 14.822333259621287 51 17.456409025904165 36.86843535352854 26.83027428335739 18.8448813372099 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3951.0 1 5774.0 2 7597.0 3 28453.5 4 49310.0 5 36711.5 6 24113.0 7 24541.5 8 24970.0 9 25263.5 10 25557.0 11 25141.0 12 24725.0 13 23952.0 14 23179.0 15 22063.5 16 20948.0 17 19393.0 18 17838.0 19 17599.5 20 17361.0 21 17823.5 22 18286.0 23 21469.5 24 24653.0 25 28008.5 26 39794.0 27 48224.0 28 57115.5 29 66007.0 30 73563.5 31 81120.0 32 91393.5 33 101667.0 34 116478.5 35 131290.0 36 132966.5 37 134643.0 38 150206.0 39 165769.0 40 209474.0 41 253179.0 42 296551.0 43 339923.0 44 328018.5 45 316114.0 46 269445.0 47 222776.0 48 197726.5 49 172677.0 50 146218.5 51 119760.0 52 99690.0 53 79620.0 54 67845.5 55 56071.0 56 50877.5 57 45684.0 58 42942.5 59 40201.0 60 38111.0 61 36021.0 62 31651.5 63 27282.0 64 23510.5 65 19739.0 66 16826.0 67 13913.0 68 12355.5 69 10798.0 70 9491.5 71 8185.0 72 6993.0 73 5801.0 74 4460.5 75 2410.5 76 1701.0 77 1332.0 78 963.0 79 781.5 80 600.0 81 480.0 82 360.0 83 219.5 84 79.0 85 79.5 86 80.0 87 52.5 88 25.0 89 17.0 90 9.0 91 8.0 92 7.0 93 7.0 94 7.0 95 3.5 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2817269.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.714871136640433 #Duplication Level Percentage of deduplicated Percentage of total 1 79.71929015236825 13.324976620012835 2 6.147202333063998 2.054993896960403 3 2.3672653393590974 1.1870560528086807 4 1.4075345950991027 0.9410703750977948 5 0.972569018106164 0.8128182904566723 6 0.7907732615786592 0.7930603899352888 7 0.6357156470649056 0.7438133584165121 8 0.5497107705268609 0.735067575342384 9 0.45183107002401524 0.6797068299883597 >10 4.55591164737779 16.360492842182275 >50 0.9881852707273722 11.826617568055262 >100 1.3784894375125956 44.75808302858507 >500 0.03017184014439721 3.2343621334006354 >1k 0.0049216476831286235 1.3476389664956556 >5k 2.1398468187515754E-4 0.21252908166349554 >10k+ 2.1398468187515754E-4 0.9877129905986923 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27615 0.9802045882022625 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5942 0.21091347684583903 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3748 0.1330366393837436 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3746 0.13296564864767974 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.004933856156440865 0.0 2 0.0 0.0 0.0 0.028964220314070116 0.0 3 0.0 0.0 0.0 0.04713784874642783 0.0 4 0.0 0.0 0.0 0.07546315243592287 0.0 5 0.0 0.0 0.0 0.14893856426205662 0.0 6 0.0 0.0 0.0 0.23725103992554492 0.0 7 0.0 0.0 0.0 0.29596037865038805 0.0 8 0.0 0.0 0.0 0.40386629746751196 0.0 9 0.0 0.0 0.0 0.4662316590996458 0.0 10 0.0 0.0 0.0 0.5583066437745207 0.0 11 0.0 0.0 0.0 0.6481454202633827 0.0 12 0.0 0.0 0.0 0.7158705824683408 0.0 13 0.0 0.0 0.0 0.7447283166783151 0.0 14 0.0 0.0 0.0 0.757897098218168 0.0 15 0.0 0.0 0.0 0.7763901849628133 0.0 16 0.0 0.0 0.0 0.8127374418275287 0.0 17 0.0 0.0 0.0 0.854018554848685 0.0 18 0.0 0.0 0.0 0.920394893068429 0.0 19 0.0 0.0 0.0 0.9509564049439369 0.0 20 0.0 0.0 0.0 0.9862033053996618 0.0 21 0.0 0.0 0.0 1.034512501291144 0.0 22 0.0 0.0 0.0 1.0851998868407666 0.0 23 0.0 0.0 0.0 1.1444061607180571 0.0 24 0.0 0.0 0.0 1.1909760835759737 0.0 25 0.0 0.0 0.0 1.2271458636005295 0.0 26 0.0 0.0 0.0 1.2702017450232832 0.0 27 0.0 0.0 0.0 1.3129381681337493 0.0 28 0.0 0.0 0.0 1.3581947623744839 0.0 29 0.0 0.0 0.0 1.4075688193069245 0.0 30 0.0 0.0 0.0 1.4769977591774162 0.0 31 0.0 0.0 0.0 1.5408539262668919 0.0 32 0.0 0.0 0.0 1.6010540704490768 0.0 33 0.0 0.0 0.0 1.658911520341153 0.0 34 0.0 0.0 0.0 1.7250038956166416 0.0 35 0.0 0.0 0.0 1.8154105979940147 0.0 36 0.0 0.0 0.0 1.884449088816155 0.0 37 0.0 0.0 0.0 1.9582084635865442 0.0 38 0.0 0.0 0.0 2.0310804541561347 0.0 39 0.0 0.0 0.0 2.122268054630211 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGAC 20 7.035032E-4 45.0 9 CACGCTA 20 7.035032E-4 45.0 23 GCACGAC 25 3.892253E-5 45.0 27 ACTCGAT 20 7.035032E-4 45.0 43 CCGGTCA 25 3.892253E-5 45.0 45 CGATCTA 25 3.892253E-5 45.0 10 TAATGCG 125 0.0 43.199997 1 CGTTTTT 18225 0.0 42.580246 1 TATTGCG 215 0.0 41.860462 1 TAAGACG 135 0.0 41.666664 1 TACGGGC 225 0.0 41.0 4 ATACCGG 90 0.0 40.0 2 TAGTCGT 45 1.9299478E-8 40.0 13 CATACGA 990 0.0 39.545452 18 TATAGCG 205 0.0 39.512196 1 CGGGATC 325 0.0 39.46154 6 ATGTCGC 40 3.4606092E-7 39.375 29 AACGACC 40 3.4606092E-7 39.375 31 GCTACGA 195 0.0 39.230766 10 TGCGAAG 155 0.0 39.19355 1 >>END_MODULE