SRR1545092_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545092_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1504317
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3573	0.2375164277210189	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2005	0.13328307796827396	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1907	0.1267684936087274	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTGCGT	20	7.033981E-4	45.000004	27
CAGGTTA	20	7.033981E-4	45.000004	28
AACGTTG	20	7.033981E-4	45.000004	1
ATCCTCG	20	7.033981E-4	45.000004	1
AATCCGG	20	7.033981E-4	45.000004	2
AGTCCGA	20	7.033981E-4	45.000004	38
GTCGCCG	20	7.033981E-4	45.000004	28
TCGCAAG	20	7.033981E-4	45.000004	1
GCGACGG	85	0.0	45.000004	2
AATTTCG	20	7.033981E-4	45.000004	39
GCGAATG	45	3.8562575E-10	45.000004	1
CATGCCC	20	7.033981E-4	45.000004	23
TAGACCA	20	7.033981E-4	45.000004	3
GCGCGAG	20	7.033981E-4	45.000004	1
GCGCGAC	45	3.8562575E-10	45.000004	9
TATGGTG	20	7.033981E-4	45.000004	37
TTTCGCA	20	7.033981E-4	45.000004	13
TAGGTCG	45	3.8562575E-10	45.000004	1
CATTGCG	20	7.033981E-4	45.000004	1
GCTATCC	20	7.033981E-4	45.000004	17