##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545091_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4587335 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.85173461279806 31.0 31.0 33.0 30.0 33.0 2 31.160805347767276 31.0 31.0 33.0 30.0 34.0 3 31.333635106221806 31.0 31.0 34.0 28.0 34.0 4 35.17250669506369 37.0 35.0 37.0 32.0 37.0 5 35.01628418242836 37.0 35.0 37.0 32.0 37.0 6 35.08395004942957 37.0 35.0 37.0 32.0 37.0 7 35.53098018784327 36.0 35.0 37.0 35.0 37.0 8 35.61387603041853 37.0 35.0 37.0 35.0 37.0 9 37.456676261925494 39.0 37.0 39.0 35.0 39.0 10 36.994764934324614 39.0 37.0 39.0 33.0 39.0 11 36.504018128172454 39.0 35.0 39.0 32.0 39.0 12 34.68180501315034 35.0 33.0 39.0 30.0 39.0 13 34.0420211299153 35.0 33.0 39.0 25.0 39.0 14 34.56602319211481 35.0 33.0 39.0 25.0 41.0 15 35.177933157268875 35.0 33.0 40.0 30.0 41.0 16 35.471019666102436 35.0 34.0 39.0 31.0 41.0 17 35.34554594334183 35.0 34.0 39.0 31.0 41.0 18 35.46457256773268 36.0 34.0 39.0 31.0 41.0 19 35.31790571214005 36.0 34.0 39.0 30.0 41.0 20 35.01096845990101 35.0 34.0 39.0 30.0 41.0 21 34.82140698248547 35.0 34.0 39.0 29.0 41.0 22 34.65300659315267 35.0 33.0 39.0 29.0 41.0 23 34.65314894159681 35.0 34.0 38.0 29.0 41.0 24 34.799251199225694 35.0 34.0 38.0 29.0 41.0 25 34.71566541357891 35.0 34.0 38.0 29.0 41.0 26 34.473029111673775 35.0 34.0 38.0 29.0 41.0 27 34.44165032638776 35.0 34.0 38.0 29.0 41.0 28 34.599520200726566 35.0 34.0 38.0 29.0 41.0 29 34.65165308398013 35.0 34.0 38.0 29.0 41.0 30 34.606461921791194 35.0 34.0 38.0 29.0 41.0 31 34.28664965606392 35.0 34.0 38.0 29.0 41.0 32 34.11826757801643 35.0 34.0 38.0 27.0 41.0 33 33.89359115913706 35.0 33.0 38.0 27.0 41.0 34 33.73184147222734 35.0 33.0 38.0 25.0 41.0 35 33.48008288036518 35.0 33.0 38.0 24.0 41.0 36 33.188181155289506 35.0 33.0 38.0 23.0 41.0 37 33.21602651648506 35.0 32.0 38.0 23.0 40.0 38 33.315648410242545 35.0 32.0 38.0 23.0 40.0 39 33.32838587109945 35.0 33.0 38.0 23.0 41.0 40 32.88254335033304 35.0 32.0 38.0 23.0 41.0 41 33.07607706871201 35.0 32.0 38.0 23.0 40.0 42 33.08445535370755 35.0 32.0 38.0 23.0 40.0 43 33.04594366881861 35.0 32.0 38.0 23.0 41.0 44 33.033645024834684 35.0 32.0 38.0 23.0 40.0 45 33.1360678912702 35.0 32.0 38.0 23.0 40.0 46 33.175278020898844 35.0 33.0 38.0 23.0 40.0 47 33.10094205023178 35.0 32.0 38.0 23.0 40.0 48 33.166816463153445 35.0 33.0 38.0 23.0 40.0 49 33.2441352114027 35.0 33.0 38.0 24.0 40.0 50 32.94685193036916 35.0 32.0 37.0 24.0 40.0 51 32.621132749188796 35.0 32.0 37.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 1.0 12 7.0 13 10.0 14 36.0 15 104.0 16 426.0 17 1261.0 18 2925.0 19 5965.0 20 10801.0 21 17202.0 22 26007.0 23 38039.0 24 53182.0 25 72491.0 26 92178.0 27 106760.0 28 119813.0 29 137621.0 30 165077.0 31 203191.0 32 261690.0 33 349830.0 34 664561.0 35 959646.0 36 209919.0 37 245202.0 38 347383.0 39 495743.0 40 258.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.44483670802329 24.319414213263258 31.745882958188144 12.489866120525315 2 28.703964284273987 26.66659400283607 31.623458936397714 13.005982776492234 3 27.186263920119195 26.112394233253077 33.69823655782715 13.00310528880058 4 25.049489518424096 28.3707642890698 32.880790262756044 13.698955929750062 5 22.491599152885065 32.79858567120125 31.744378816894773 12.96543635901891 6 20.548052409514455 41.55820318332976 28.375887089126913 9.517857318028877 7 86.39388664660417 5.773003279681994 6.704938706242296 1.1281713674715275 8 89.13292794182243 3.6981820599542 5.77915063975053 1.3897393584728388 9 85.9691520239965 5.033118357390511 7.2237148584090765 1.7740147602039094 10 69.75963168157547 15.154768509385077 10.18981609147795 4.895783717561503 11 67.87585820525425 13.267768758985337 13.6055029772188 5.250870058541615 12 58.2282741504599 21.297376363400534 14.294966467458774 6.179383018680781 13 16.511002575569474 61.144411733610035 15.511467987404451 6.833117703416036 14 8.060758588592288 60.35475935374242 24.13638855675463 7.448093500910659 15 6.847047359741549 20.631652146616716 65.11915959920086 7.4021408944408895 16 7.360700711851216 13.83293350060547 62.839578971232754 15.96678681631056 17 8.1742885575176 14.816336718377881 29.279963203036186 47.72941152106833 18 14.868305890021114 21.488969085536592 46.96746585980749 16.675259164634802 19 36.930200214285634 16.30933864651263 28.22815425513942 18.532306884062315 20 36.156613807363094 19.27814297407972 27.51087505054678 17.054368168010402 21 15.388869572420589 36.128296712579306 31.04033169585391 17.442502019146193 22 18.429676489726607 24.143865664923098 18.884406741604877 38.54205110374542 23 11.00488627928852 36.00345298522999 24.293407828292462 28.69825290718903 24 8.899437254963939 18.761546736830862 60.3238481602063 12.015167847998892 25 7.183255637532467 23.75841310913635 52.76621393467013 16.292117318661052 26 6.929884126622538 46.15926240398837 28.902554533296566 18.008298936092523 27 8.244787005963158 56.81882836112907 24.532675289683446 10.403709343224333 28 6.526142084674436 37.07928459552224 45.702003450805314 10.692569868998012 29 7.216978921312702 25.717720637363524 43.70528858258662 23.360011858737153 30 13.161497906736699 46.85990885775728 28.56098366480756 11.417609570698456 31 36.79737799833672 29.50314289233291 24.456683455644725 9.242795653685636 32 41.04986882361981 19.706321862257717 29.713177694674574 9.530631619447893 33 40.21284689258579 26.35024474994741 18.5602097950117 14.876698562455108 34 19.951823880313952 25.754779190968176 22.76236638484 31.531030543877876 35 18.48040310986662 23.217990401834616 36.64901298902304 21.652593499275724 36 43.95338469939518 23.78426690006289 21.26860148648398 10.993746914057944 37 14.903664109989787 48.364311740912754 26.463578526530107 10.268445622567352 38 15.67650934584023 47.05562161908821 19.557063087827682 17.71080594724388 39 20.763166413614876 41.1602815142125 24.932057501795704 13.144494570376919 40 30.19748939198903 21.19570513162871 23.7669583756146 24.839847100767656 41 11.72807305330873 22.259917795408445 26.3153443121115 39.696664839171326 42 16.005981686534774 18.334087220575782 25.326774695983616 40.33315639690583 43 16.73339749549575 19.401286367793066 28.81963056981886 35.045685566892324 44 10.100003596859615 31.99515622905238 36.37996788985326 21.524872284234746 45 9.638995190017734 58.44877254440759 18.979167643086893 12.933064622487784 46 18.322206684273112 45.23153421321966 22.180176507710904 14.266082594796325 47 18.17652297030847 28.835609346167217 23.721964931708715 29.2659027518156 48 18.32229388086983 26.59476580629058 41.27533742358035 13.807602889259233 49 23.946779557193885 25.204285276745647 39.345698537386085 11.503236628674383 50 18.740619553618824 48.20075272462116 20.457237154033876 12.601390567726142 51 16.083673854209472 43.04566812757298 21.809852561454527 19.06080545676302 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 9796.0 1 9564.5 2 9333.0 3 16875.5 4 24418.0 5 20493.5 6 16569.0 7 17944.5 8 19320.0 9 21591.5 10 23863.0 11 23917.0 12 23971.0 13 23646.0 14 23321.0 15 20931.0 16 18541.0 17 17554.0 18 16567.0 19 17327.0 20 18087.0 21 18255.5 22 18424.0 23 17744.0 24 17064.0 25 19775.5 26 33152.5 27 43818.0 28 58055.5 29 72293.0 30 77335.5 31 82378.0 32 100430.0 33 118482.0 34 125717.0 35 132952.0 36 140984.5 37 149017.0 38 197178.0 39 245339.0 40 410480.0 41 575621.0 42 707097.5 43 838574.0 44 776962.5 45 715351.0 46 614778.0 47 514205.0 48 440058.5 49 365912.0 50 293591.0 51 221270.0 52 168106.0 53 114942.0 54 80486.0 55 46030.0 56 35747.0 57 25464.0 58 21865.5 59 18267.0 60 16785.5 61 15304.0 62 13277.0 63 11250.0 64 9010.0 65 6770.0 66 5734.5 67 4699.0 68 3807.5 69 2916.0 70 2361.5 71 1807.0 72 1540.5 73 1274.0 74 977.0 75 556.5 76 433.0 77 325.5 78 218.0 79 195.0 80 172.0 81 126.5 82 81.0 83 58.0 84 35.0 85 23.0 86 11.0 87 7.0 88 3.0 89 2.5 90 2.0 91 1.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4587335.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.430803336820976 #Duplication Level Percentage of deduplicated Percentage of total 1 79.19995821462861 9.845191048504871 2 9.350909057318013 2.324786230240365 3 3.388546392456513 1.263670614069633 4 1.6364511060994131 0.8136960748097983 5 0.9281357316391077 0.5768736374941098 6 0.6079193919573014 0.45341558436366003 7 0.42027470418431806 0.3657046536609108 8 0.3291832986493845 0.3273610277821204 9 0.2630695017918291 0.29431487166207304 >10 2.3349057873520254 6.256356474462867 >50 0.4488557295153397 3.9945015661383683 >100 0.6036506861303995 19.118975699823153 >500 0.38797285990306046 35.63125911345232 >1k 0.09910943057523634 17.760211035795713 >5k 8.817564997796827E-4 0.7166044425219322 >10k+ 1.7635129995593657E-4 0.257077925218107 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11727 0.25563862242456675 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8156 0.17779386070561665 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7469 0.1628178452195011 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5917 0.12898556569337097 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5623 0.12257661583468396 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 5524 0.12041850006594243 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4757 0.10369855264549024 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4704 0.10254319773899224 No Hit TATAGAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 4597 0.10021068877681703 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04276993068960518 0.0 2 0.0 0.0 0.0 0.16613131589474062 0.0 3 0.0 0.0 0.0 0.22326688589344357 0.0 4 0.0 0.0 0.0 0.3163492528886598 0.0 5 0.0 0.0 0.0 0.5322044280611727 0.0 6 0.0 0.0 0.0 0.7178895807696626 0.0 7 0.0 0.0 0.0 0.8537636776036631 0.0 8 0.0 0.0 0.0 1.1628320146664675 0.0 9 0.0 0.0 0.0 1.2608845876745431 0.0 10 0.0 0.0 0.0 1.4178820600631958 0.0 11 0.0 0.0 0.0 1.5898773470871432 0.0 12 0.0 0.0 0.0 1.739310514710611 0.0 13 0.0 0.0 0.0 1.8074546550448136 0.0 14 0.0 0.0 0.0 1.8296897872076052 0.0 15 0.0 0.0 0.0 1.8730046966266907 0.0 16 0.0 0.0 0.0 1.9680053887496771 0.0 17 0.0 0.0 0.0 2.0763035618719803 0.0 18 0.0 0.0 0.0 2.264321223542645 0.0 19 0.0 0.0 0.0 2.3281927306377233 0.0 20 0.0 0.0 0.0 2.394047960308109 0.0 21 0.0 0.0 0.0 2.503261697695939 0.0 22 0.0 0.0 0.0 2.606611463954562 0.0 23 0.0 0.0 0.0 2.742768949727892 0.0 24 0.0 0.0 0.0 2.8354807311870616 0.0 25 0.0 0.0 0.0 2.9078539064620306 0.0 26 0.0 0.0 0.0 2.995682678505058 0.0 27 0.0 0.0 0.0 3.0644807933146367 0.0 28 0.0 0.0 0.0 3.142390952481125 0.0 29 0.0 0.0 0.0 3.2281270062029477 0.0 30 0.0 0.0 0.0 3.3690585056465245 0.0 31 0.0 0.0 0.0 3.510186197432714 0.0 32 0.0 0.0 0.0 3.615912070951871 0.0 33 0.0 0.0 0.0 3.717626901022053 0.0 34 0.0 0.0 0.0 3.832944400180061 0.0 35 0.0 0.0 0.0 4.010978051526649 0.0 36 0.0 0.0 0.0 4.1445196393984745 0.0 37 0.0 0.0 0.0 4.274595162550805 0.0 38 0.0 0.0 0.0 4.386642789331932 0.0 39 0.0 0.0 0.0 4.4918672824199675 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTCC 100 0.0 45.000004 39 CTCACGA 90 0.0 45.000004 24 ACGCCCA 25 3.8926366E-5 45.000004 29 GTCGAAA 25 3.8926366E-5 45.000004 41 TCACACG 90 0.0 45.000004 1 CCGGCAT 20 7.0354954E-4 45.000004 31 CATTGCG 45 3.8562575E-10 45.000004 1 CTATACG 20 7.0354954E-4 45.000004 1 CCTACGC 45 3.8562575E-10 45.000004 28 TAACGCG 20 7.0354954E-4 45.000004 1 TCTAGCG 90 0.0 45.000004 1 TCGGAGC 20 7.0354954E-4 45.000004 39 GCCGAAT 25 3.8926366E-5 45.000004 35 GCGATAC 250 0.0 45.000004 9 TCCGTCA 50 2.1827873E-11 45.000004 18 ACCACGG 45 3.8562575E-10 45.000004 2 CATCGTA 20 7.0354954E-4 45.000004 1 ATGCGTA 45 3.8562575E-10 45.000004 29 CAGTCGT 40 6.8230293E-9 45.000004 17 ATCGGCA 20 7.0354954E-4 45.000004 11 >>END_MODULE